; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028795 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028795
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr8:30824727..30826429
RNA-Seq ExpressionLag0028795
SyntenyLag0028795
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR005162 - Retrotransposon gag domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382715.1 uncharacterized protein LOC107175626 [Citrus sinensis]7.4e-1430.24Show/hide
Query:  TIYPPHDELIFCEQGRLEPSGLLGMDDEELKG----RRVGTSYDDPMQRGIPPELKTFASHGRWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSS
        TI+   ++LIF E+ ++EP       +  L+     R+ GT +    +           S  RW P P N  KLN D   N K +K G+G +LRDS+G  
Subjt:  TIYPPHDELIFCEQGRLEPSGLLGMDDEELKG----RRVGTSYDDPMQRGIPPELKTFASHGRWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSS

Query:  ISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRL
        ++ G  ++S    + + E +AI  GL+             +TS+ VE+D  ++ +++N       EI ++  EI   K+ F+ IHF+F PR  N  A  L
Subjt:  ISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRL

Query:  ARAAI
        A+ A+
Subjt:  ARAAI

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.8e-1337.06Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE
        +W P  +N+WKLNT+  W      GGIGWILRD  G  I      I     I +LE+ AI EGL+ I     R        I +ESD+L  I +L+ + +
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE

Query:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        D  EI +L EEI  + K  + +      R  N  A  LAR A+
Subjt:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]5.1e-1536.16Show/hide
Query:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ
        MK +VP KFK+PT   +DG   LV HL+AY+ WMD + VS A                         ISSFK LA+A V QF+  R + +P   LLT+KQ
Subjt:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ

Query:  QPSESLRYYITRFNDEALQVD---------------------------------RVCLRAQKYMSAEELQNGKRNVE
        + +ESL  Y+ RFN+E LQV+                                     RAQKYMSA E    KR  E
Subjt:  QPSESLRYYITRFNDEALQVD---------------------------------RVCLRAQKYMSAEELQNGKRNVE

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.5e-1438.89Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQV-STSIFVESDALNIIKILNEED
        RW P  +N+WKLNTD  W      GGIGWILRD  G  I      I     I +LE+ AI EGL+ I     R   Q     I +ESD+L  I +L+ + 
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQV-STSIFVESDALNIIKILNEED

Query:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        +D  EI +L EEI  + +  K +      R  N  A  LAR A+
Subjt:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.7e-1340.5Show/hide
Query:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ
        M+ +VP KFK+PT  P+DG    V HL+AY+ WMD + VS A                         ISSFK LA+A + QF+  R + +P   LLT+KQ
Subjt:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ

Query:  QPSESLRYYITRFNDEALQVD
        + +ESL  Y+ RFN+E LQ++
Subjt:  QPSESLRYYITRFNDEALQVD

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134121.4e-1337.06Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE
        +W P  +N+WKLNT+  W      GGIGWILRD  G  I      I     I +LE+ AI EGL+ I     R        I +ESD+L  I +L+ + +
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE

Query:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        D  EI +L EEI  + K  + +      R  N  A  LAR A+
Subjt:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

A0A6J1D7D2 uncharacterized protein LOC1110183072.5e-1536.16Show/hide
Query:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ
        MK +VP KFK+PT   +DG   LV HL+AY+ WMD + VS A                         ISSFK LA+A V QF+  R + +P   LLT+KQ
Subjt:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ

Query:  QPSESLRYYITRFNDEALQVD---------------------------------RVCLRAQKYMSAEELQNGKRNVE
        + +ESL  Y+ RFN+E LQV+                                     RAQKYMSA E    KR  E
Subjt:  QPSESLRYYITRFNDEALQVD---------------------------------RVCLRAQKYMSAEELQNGKRNVE

A0A6J1DSV1 uncharacterized protein LOC1110236081.2e-1438.89Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQV-STSIFVESDALNIIKILNEED
        RW P  +N+WKLNTD  W      GGIGWILRD  G  I      I     I +LE+ AI EGL+ I     R   Q     I +ESD+L  I +L+ + 
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQV-STSIFVESDALNIIKILNEED

Query:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        +D  EI +L EEI  + +  K +      R  N  A  LAR A+
Subjt:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

A0A6J1DZ49 uncharacterized protein LOC1110248513.0e-1334.46Show/hide
Query:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ
        MK +   KFK+P    YDG+   + HL+AY+ W D + +  A                         ISSFK+LA+A V QF+  R + KP   LLT+KQ
Subjt:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ

Query:  QPSESLRYYITRFNDEALQV----DRVCL-----------------------------RAQKYMSAEELQNGKRNVE
        + +ESL+ Y+ RFN+E LQV    D V L                             RAQKYMSA EL +  R++E
Subjt:  QPSESLRYYITRFNDEALQV----DRVCL-----------------------------RAQKYMSAEELQNGKRNVE

A0A6J1E1E7 uncharacterized protein LOC1110255481.8e-1340.5Show/hide
Query:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ
        M+ +VP KFK+PT  P+DG    V HL+AY+ WMD + VS A                         ISSFK LA+A + QF+  R + +P   LLT+KQ
Subjt:  MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAA-------------------------ISSFKDLAQALVAQFMRAREQRKPHINLLTVKQ

Query:  QPSESLRYYITRFNDEALQVD
        + +ESL  Y+ RFN+E LQ++
Subjt:  QPSESLRYYITRFNDEALQVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-1231.25Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEED-
        +W   P    K NTD TW  +  + GIGWILR+ SG  + +G   + +   +   E++A+   +  +     +        I  ESDA  ++ +LN +D 
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEED-

Query:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
           L+ +   E+I  L   F+E+ F+F PR  N  ADR+AR +I
Subjt:  EDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

AT2G46460.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-0527.86Show/hide
Query:  PANAW-KLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLE
        P + W K N D ++N ++     GWI+RD SG  +S G    +        E +A+L  +++  S    +G++    I+ E D   +++ILN   +   +
Subjt:  PANAW-KLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLE

Query:  ISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAIP
        I     ++   K+ F+E  F +  R QN  AD LA++ +P
Subjt:  ISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAIP

AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-0523.08Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE
        +W    A   K N DV+ +   +  G+ WI+R+S G+ +  G  +      IK  E  A++  ++    +  R        +  E D + + +++  ++ 
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE

Query:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        +   + +  E I    K F  + F F  R QN   D LA+ A+
Subjt:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI

AT4G29090.1 Ribonuclease H-like superfamily protein7.9e-1427.86Show/hide
Query:  IYPPHDELIFCEQGR-LEPSGLLGMDDEELKGRRVGTSYDDPMQRGIPPELKTFASHGRWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLG
        ++   +EL+F  +GR      +L   +++L+  R+ T  +     G  P++   +S GRW P P    K NTD TWN   ++ GIGW+LR+  G    +G
Subjt:  IYPPHDELIFCEQGR-LEPSGLLGMDDEELKGRRVGTSYDDPMQRGIPPELKTFASHGRWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLG

Query:  FHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAA
           + K   +   E++A+   + ++   +          +  ESD+  +I+ILN  DE    +    +++  L   F E+ F F PR  N  A+R+AR +
Subjt:  FHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAA

Query:  I
        +
Subjt:  I

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0626.57Show/hide
Query:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE
        +W P   +  K N D + +E+    G+GWILR+S G+ I  G  +       +  E   ++  ++  +      G++    +  E D   I +++N +  
Subjt:  RWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGFHRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDE

Query:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI
        +     FL + I      F+ I F F  R QN  AD LA+ AI
Subjt:  DVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCCTCTGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAATAAATACCTCGTGCAACATCTAAACGCCTACAAAAGCTGGATGGACTTCCA
CAGCGTCTCAGCTGCAATCAGCTCTTTCAAGGATTTAGCCCAAGCACTCGTTGCACAGTTCATGCGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTTTTAACAGTCA
AACAACAGCCAAGTGAGAGCTTGCGTTATTATATAACACGTTTTAATGATGAAGCACTACAAGTTGACAGAGTTTGTCTCCGGGCACAGAAATACATGAGCGCAGAAGAG
TTGCAAAATGGTAAAAGGAATGTGGAAACGATATATCCCCCTCACGATGAACTTATTTTCTGTGAACAGGGGAGATTGGAACCCAGCGGATTATTGGGCATGGATGATGA
AGAACTTAAAGGAAGAAGAGTTGGAACAAGCTATGATGATCCTATGCAACGAGGAATTCCGCCCGAATTAAAGACCTTCGCGAGTCATGGAAGATGGGTTCCTTTGCCGG
CAAATGCATGGAAACTAAATACGGACGTAACCTGGAACGAAAAACTGAAAAAAGGAGGAATTGGATGGATTCTTCGTGACTCTTCAGGGTCTTCAATCAGCCTGGGATTC
CATCGGATTAGTAAGAATTGGCCAATTAAATTTTTGGAGATGAAGGCAATTTTAGAAGGCCTGAAGAACATACATTCAATCGAGATCAGAAATGGCAATCAGGTTTCTAC
CTCTATCTTTGTCGAGTCTGACGCGCTTAATATCATCAAGATCCTTAACGAAGAAGATGAGGACGTCTTAGAAATCTCTTTCCTCACTGAAGAGATAAACCACTTGAAGA
AACTCTTTAAAGAGATTCACTTTGATTTTTGCCCAAGAGCTCAAAATTTCGCTGCAGATCGTCTGGCGCGAGCAGCGATTCCCCCCCCCCCCCCCCCCCGCCCTTCAATT
CCGTTTTGGATACCTTTTCCATGGTGGAAGAATGTGCGGCGTATGGAATGGGCATCCCCCGTTGTAGTGAGTTCTACGACTGTAGAGGATCATTCTCCGCTGGCCTTGTC
CTGCTGGGATGGTCGAATGGCGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCCTCTGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAATAAATACCTCGTGCAACATCTAAACGCCTACAAAAGCTGGATGGACTTCCA
CAGCGTCTCAGCTGCAATCAGCTCTTTCAAGGATTTAGCCCAAGCACTCGTTGCACAGTTCATGCGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTTTTAACAGTCA
AACAACAGCCAAGTGAGAGCTTGCGTTATTATATAACACGTTTTAATGATGAAGCACTACAAGTTGACAGAGTTTGTCTCCGGGCACAGAAATACATGAGCGCAGAAGAG
TTGCAAAATGGTAAAAGGAATGTGGAAACGATATATCCCCCTCACGATGAACTTATTTTCTGTGAACAGGGGAGATTGGAACCCAGCGGATTATTGGGCATGGATGATGA
AGAACTTAAAGGAAGAAGAGTTGGAACAAGCTATGATGATCCTATGCAACGAGGAATTCCGCCCGAATTAAAGACCTTCGCGAGTCATGGAAGATGGGTTCCTTTGCCGG
CAAATGCATGGAAACTAAATACGGACGTAACCTGGAACGAAAAACTGAAAAAAGGAGGAATTGGATGGATTCTTCGTGACTCTTCAGGGTCTTCAATCAGCCTGGGATTC
CATCGGATTAGTAAGAATTGGCCAATTAAATTTTTGGAGATGAAGGCAATTTTAGAAGGCCTGAAGAACATACATTCAATCGAGATCAGAAATGGCAATCAGGTTTCTAC
CTCTATCTTTGTCGAGTCTGACGCGCTTAATATCATCAAGATCCTTAACGAAGAAGATGAGGACGTCTTAGAAATCTCTTTCCTCACTGAAGAGATAAACCACTTGAAGA
AACTCTTTAAAGAGATTCACTTTGATTTTTGCCCAAGAGCTCAAAATTTCGCTGCAGATCGTCTGGCGCGAGCAGCGATTCCCCCCCCCCCCCCCCCCCGCCCTTCAATT
CCGTTTTGGATACCTTTTCCATGGTGGAAGAATGTGCGGCGTATGGAATGGGCATCCCCCGTTGTAGTGAGTTCTACGACTGTAGAGGATCATTCTCCGCTGGCCTTGTC
CTGCTGGGATGGTCGAATGGCGGTCTGA
Protein sequenceShow/hide protein sequence
MKAEVPLKFKVPTFTPYDGNKYLVQHLNAYKSWMDFHSVSAAISSFKDLAQALVAQFMRAREQRKPHINLLTVKQQPSESLRYYITRFNDEALQVDRVCLRAQKYMSAEE
LQNGKRNVETIYPPHDELIFCEQGRLEPSGLLGMDDEELKGRRVGTSYDDPMQRGIPPELKTFASHGRWVPLPANAWKLNTDVTWNEKLKKGGIGWILRDSSGSSISLGF
HRISKNWPIKFLEMKAILEGLKNIHSIEIRNGNQVSTSIFVESDALNIIKILNEEDEDVLEISFLTEEINHLKKLFKEIHFDFCPRAQNFAADRLARAAIPPPPPPRPSI
PFWIPFPWWKNVRRMEWASPVVVSSTTVEDHSPLALSCWDGRMAV