; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028796 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028796
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:30832705..30833949
RNA-Seq ExpressionLag0028796
SyntenyLag0028796
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.3e-5651.94Show/hide
Query:  KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAI
        KLLS R I C +L+ TL IAW++D     V+ +G N+FLFNF +  DRNR+ R GPW FD+ L++++   +L KP ++ F   S WVHF+DL LACMN  
Subjt:  KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAI

Query:  MAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGA
        MA +LGN IG FE+V+ NAN  CWG  LRVR R D++K L RGIK+N+D P+GG WIP++YERLP+F    G L H +KDCS       D+V    +YG 
Subjt:  MAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGA

Query:  WLRFDG
        WLRF G
Subjt:  WLRFDG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.5e-6046.91Show/hide
Query:  MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPL
        + + L  KLL+ R+I  ++L R L +AW+V+  L VE +GKN+FLF+F +  D NRV +TGPWFFDK L+VL+   +    SEL FN+ +FW+H +DLP+
Subjt:  MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPL

Query:  ACMNAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPS
        + +N  MA +LGN IG F +VDCN  G  WG SLR+R  IDI K LRRGIKIN+D P+GG WIP++YERLP+FC   G++GH   DC     + +D   +
Subjt:  ACMNAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPS

Query:  ACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSELG
          EYG WLRF G      K   G S +   +  +  + S E G
Subjt:  ACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSELG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.0e-4841.31Show/hide
Query:  LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        L  KL   R I C +++ T+  AW+++    +V+ LG N+FLF+F + +DRN+++++GPW FD+ L+++    AL+ PSEL F K   WV F+DLPL C+
Subjt:  LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE
           MA +LGN +G FEE DC+     WG +LRVR  +DI K LRRGIK+N+D PIGG+WIP++YERLP+FC            C L  S K+       +
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE

Query:  YGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKNVHLGSSELGAAPPSETVDV
        YG+WLR+ G  KPT     +P   L     ++S SS+   V  GS  + +AP +  + +
Subjt:  YGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKNVHLGSSELGAAPPSETVDV

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.2e-4141.43Show/hide
Query:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        CL  KLL+ R    E ++ TL   W+   G+QV  +G N+F+F F  +VD+ RV   GPW FDK LL+L  +D  V+PS++   +  FWVH  +LPL  M
Subjt:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSA
        N  + + +GN +G+F ++D    G  WG ++R+R  +D+ K LRRG+K+ + S  PI   W+  KYERLP +C   G LGH  ++C   LSS + +   +
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSA

Query:  CEYGAWLRFD
         +YGAWLR D
Subjt:  CEYGAWLRFD

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.0e-4041.43Show/hide
Query:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        CL  KLL+ R    E ++ TL   W+   G+QV  +G N+F+F F  +VD+ RV   GPW FDK LL+L  +D  V+PS++      FWVH  +LPL  M
Subjt:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSA
        N  + + +GN +G+F ++D    G  WG ++R+R  ID+ K LRRG+K+ + S  PI   W+  KYERLP +C   G LGH  ++C   LS  +     +
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSA

Query:  CEYGAWLRFD
         +YGAWLR D
Subjt:  CEYGAWLRFD

TrEMBL top hitse value%identityAlignment
A0A5C7GUN2 CCHC-type domain-containing protein1.6e-3939.24Show/hide
Query:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        CL  K+LS R +  E  +  +   W   G + +E +GKN FLF F    DRNR++R GPW FD+ LL LE L+     S+L F+KA FWV  +D+P+ CM
Subjt:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE
        N  MAK L   IG+  E+   +   CWG  LRV+  IDI + L+R +++ +D       + +KYERLPEFC   G LGH + DC+ + + K        +
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE

Query:  YGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSS
        +G+W+R     K   K S    SS  S+ K   LG S
Subjt:  YGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSS

A0A5C7IJL3 CCHC-type domain-containing protein1.4e-4038.66Show/hide
Query:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        CL  K+LS + +  E     +   W   G +++E +G+NVF+F+F    DR+RV++ GPW FDK L+VLE+ +   + ++L FNKA FWV  +D+P+ CM
Subjt:  CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE
        N   AK L   IGE  E+   +   CWG  LRV+ RIDI + L+R +++++D       + +KYER+PEFC   G +GHG+ +CS + + KE    +   
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE

Query:  YGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSE
        +G W+R     KP  K S  LS   S   K+  +GSS+
Subjt:  YGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSE

A0A6J1BSZ1 uncharacterized protein LOC1110054816.4e-5751.94Show/hide
Query:  KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAI
        KLLS R I C +L+ TL IAW++D     V+ +G N+FLFNF +  DRNR+ R GPW FD+ L++++   +L KP ++ F   S WVHF+DL LACMN  
Subjt:  KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAI

Query:  MAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGA
        MA +LGN IG FE+V+ NAN  CWG  LRVR R D++K L RGIK+N+D P+GG WIP++YERLP+F    G L H +KDCS       D+V    +YG 
Subjt:  MAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGA

Query:  WLRFDG
        WLRF G
Subjt:  WLRFDG

A0A6J1DU55 uncharacterized protein LOC1110231353.6e-6046.91Show/hide
Query:  MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPL
        + + L  KLL+ R+I  ++L R L +AW+V+  L VE +GKN+FLF+F +  D NRV +TGPWFFDK L+VL+   +    SEL FN+ +FW+H +DLP+
Subjt:  MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPL

Query:  ACMNAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPS
        + +N  MA +LGN IG F +VDCN  G  WG SLR+R  IDI K LRRGIKIN+D P+GG WIP++YERLP+FC   G++GH   DC     + +D   +
Subjt:  ACMNAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPS

Query:  ACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSELG
          EYG WLRF G      K   G S +   +  +  + S E G
Subjt:  ACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSELG

A0A6J1DX30 uncharacterized protein LOC1110248744.9e-4941.31Show/hide
Query:  LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM
        L  KL   R I C +++ T+  AW+++    +V+ LG N+FLF+F + +DRN+++++GPW FD+ L+++    AL+ PSEL F K   WV F+DLPL C+
Subjt:  LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACM

Query:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE
           MA +LGN +G FEE DC+     WG +LRVR  +DI K LRRGIK+N+D PIGG+WIP++YERLP+FC            C L  S K+       +
Subjt:  NAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACE

Query:  YGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKNVHLGSSELGAAPPSETVDV
        YG+WLR+ G  KPT     +P   L     ++S SS+   V  GS  + +AP +  + +
Subjt:  YGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKNVHLGSSELGAAPPSETVDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTTTGCTTGACCAGGAAATTGCTTAGCCCCCGTTTGATCGGTTGCGAAATTCTGCGCAGAACTTTGTCTATTGCATGGCGGGTGGATGGGGGACTACAAGTTGA
GCGACTGGGTAAGAACGTGTTTCTCTTTAATTTTGTTAAGTTAGTTGATCGTAATCGTGTTTTTCGCACTGGGCCGTGGTTTTTTGATAAGTTTTTGTTGGTCTTGGAAA
TTTTGGATGCTCTGGTAAAGCCTTCGGAATTGTTGTTCAATAAAGCTTCTTTCTGGGTCCATTTTTATGATCTTCCGTTGGCTTGTATGAATGCTATTATGGCCAAAAAA
TTGGGGAATGTTATTGGAGAATTTGAGGAAGTGGACTGTAATGCCAATGGCTGTTGTTGGGGATTCAGTTTGCGTGTTCGGGCTCGGATTGATATTATAAAACTACTTAG
ACGGGGTATTAAGATCAATGTTGACAGCCCAATTGGGGGTAGCTGGATCCCTATGAAATATGAGCGATTGCCGGAATTTTGCTCTAGGTTTGGTATTCTGGGTCACGGAA
TGAAAGACTGTTCTTTGTTGCTTTCTTCGAAAGAAGATGCGGTTCCATCAGCTTGTGAGTATGGGGCATGGTTGCGTTTTGATGGTCCTTCGAAGCCGACTGCAAAGCCT
TCACCTGGGTTAAGTTCGTCGGTGTCTTCTGCGGGCAAAAATGTTCATCTTGGTTCTTCAGAGTTGGGTGCGGCGCCGCCGTCAGAGACGGTGGATGTCGGTTGTGCGAT
GAAAGCGCAAGTTCCGGCACCTATACCAAATGTGGAGACTTTCCAGGTGGATAACGGTCAGCCGATGGTTACTGCGGCAGATAATGTGAAGTCGTTTCCTATTATTTCGG
AGAGTGGTTTAGTGGAGAAAGATGGTTCAGTTATTACCCCAGTGCTTAGTGATTTGGGTAAGGATAAGGTGGTTGGTGATGATCTAAATGGGCTAAATTTGGCTGGTGGG
TCAAATCCAGTTGGTGGGCCAAATTTGAATGGTGGGCCTAGTGGTAAACGGAAACAAAAAGTGCGTGGGTCAAATTCTTCAAAGGCTTGCCCTGCAAATGAGTCTGCAAA
AAGAAAGGAAGCTTCTGACTTATTGGGACCGAATAGTAAGAAGTTGAAGCTAGTGCTGGAGGATAATGTTGGTTTGTCTCATGATGGTACCGATCTTTCTGGTGTATCGG
CGGAGGCTGTTGAGCAGCCCCGCCGGGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTTTGCTTGACCAGGAAATTGCTTAGCCCCCGTTTGATCGGTTGCGAAATTCTGCGCAGAACTTTGTCTATTGCATGGCGGGTGGATGGGGGACTACAAGTTGA
GCGACTGGGTAAGAACGTGTTTCTCTTTAATTTTGTTAAGTTAGTTGATCGTAATCGTGTTTTTCGCACTGGGCCGTGGTTTTTTGATAAGTTTTTGTTGGTCTTGGAAA
TTTTGGATGCTCTGGTAAAGCCTTCGGAATTGTTGTTCAATAAAGCTTCTTTCTGGGTCCATTTTTATGATCTTCCGTTGGCTTGTATGAATGCTATTATGGCCAAAAAA
TTGGGGAATGTTATTGGAGAATTTGAGGAAGTGGACTGTAATGCCAATGGCTGTTGTTGGGGATTCAGTTTGCGTGTTCGGGCTCGGATTGATATTATAAAACTACTTAG
ACGGGGTATTAAGATCAATGTTGACAGCCCAATTGGGGGTAGCTGGATCCCTATGAAATATGAGCGATTGCCGGAATTTTGCTCTAGGTTTGGTATTCTGGGTCACGGAA
TGAAAGACTGTTCTTTGTTGCTTTCTTCGAAAGAAGATGCGGTTCCATCAGCTTGTGAGTATGGGGCATGGTTGCGTTTTGATGGTCCTTCGAAGCCGACTGCAAAGCCT
TCACCTGGGTTAAGTTCGTCGGTGTCTTCTGCGGGCAAAAATGTTCATCTTGGTTCTTCAGAGTTGGGTGCGGCGCCGCCGTCAGAGACGGTGGATGTCGGTTGTGCGAT
GAAAGCGCAAGTTCCGGCACCTATACCAAATGTGGAGACTTTCCAGGTGGATAACGGTCAGCCGATGGTTACTGCGGCAGATAATGTGAAGTCGTTTCCTATTATTTCGG
AGAGTGGTTTAGTGGAGAAAGATGGTTCAGTTATTACCCCAGTGCTTAGTGATTTGGGTAAGGATAAGGTGGTTGGTGATGATCTAAATGGGCTAAATTTGGCTGGTGGG
TCAAATCCAGTTGGTGGGCCAAATTTGAATGGTGGGCCTAGTGGTAAACGGAAACAAAAAGTGCGTGGGTCAAATTCTTCAAAGGCTTGCCCTGCAAATGAGTCTGCAAA
AAGAAAGGAAGCTTCTGACTTATTGGGACCGAATAGTAAGAAGTTGAAGCTAGTGCTGGAGGATAATGTTGGTTTGTCTCATGATGGTACCGATCTTTCTGGTGTATCGG
CGGAGGCTGTTGAGCAGCCCCGCCGGGAATTATGA
Protein sequenceShow/hide protein sequence
MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKK
LGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKP
SPGLSSSVSSAGKNVHLGSSELGAAPPSETVDVGCAMKAQVPAPIPNVETFQVDNGQPMVTAADNVKSFPIISESGLVEKDGSVITPVLSDLGKDKVVGDDLNGLNLAGG
SNPVGGPNLNGGPSGKRKQKVRGSNSSKACPANESAKRKEASDLLGPNSKKLKLVLEDNVGLSHDGTDLSGVSAEAVEQPRREL