; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028800 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028800
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:30881887..30885350
RNA-Seq ExpressionLag0028800
SyntenyLag0028800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8772589.1 hypothetical protein D1007_55405 [Hordeum vulgare]5.7e-0448.15Show/hide
Query:  LGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIP
        +G +IGE ++ E DE GK  G  LRVK+K+NI +PL RG+ V+I     K W P
Subjt:  LGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIP
TXG51584.1 hypothetical protein EZV62_024108 [Acer yangbiense]3.4e-0433.64Show/hide
Query:  IACKILTSTLINPDVFSVMMPRIWGIEGAVKVTKAG-KNV-YLC--KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMA
        +A KIL+  L+N + F  ++ +IW + G V+V K    NV  LC  K+ A  LGN IGE  + E    G   G  L++++ I  ++PL+R   V +    
Subjt:  IACKILTSTLINPDVFSVMMPRIWGIEGAVKVTKAG-KNV-YLC--KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMA

Query:  DKKWIPI
        ++  +PI
Subjt:  DKKWIPI
TrEMBL top hitse value%identityAlignment
A0A0A0LNB5 CCHC-type domain-containing protein7.3e-0542.62Show/hide
Query:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIPI
        +KY +AL NSI  FE+ E  E  +  G+ L+V+ KI++ + L   TN+K+G+MA +K IP+
Subjt:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIPI
A0A6J1DU55 uncharacterized protein LOC1110231356.2e-0442.19Show/hide
Query:  YLCKKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIPI
        +L K  AI LGN+IG F D + +E G   G +LR+++ I+I +PL+RG  + I       WIPI
Subjt:  YLCKKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIPI
A0A803QHU7 Uncharacterized protein2.1e-0444.07Show/hide
Query:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWI
        K  AIALGN IGEF D   D   +  G  LRV++K+++++PLKRG  + + ++ DK W+
Subjt:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWI
A0A803QQH9 Uncharacterized protein6.2e-0440.68Show/hide
Query:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWI
        K  A+ALGN IG+FED   D   +  G  LR+++ +++ +PLKRG  + +G + DK W+
Subjt:  KKYAIALGNSIGEFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAACGGGCAACGCAAAGGTTTGCATTCAGGAGAATACCCACGAAAACCATCACAAGGAAGACCAAGCGATGGGGGAAGACGATATCCTTGAGGAAGGAATGGG
CAACGAGCAGGTTTGCAATAAGGAAGTGGATGAGATGGACAGAGACTTCAGGAACACCATAGCTTGCAAAATTCTAACATCAACGCTAATCAACCCGGATGTCTTCTCTG
TGATGATGCCTCGAATATGGGGGATCGAAGGAGCAGTAAAAGTTACAAAAGCGGGAAAGAATGTGTACTTATGCAAGAAATATGCTATAGCTTTGGGAAACTCCATTGGA
GAATTTGAAGATGCAGAGTGGGATGAATATGGGAAAATGGAAGGCGACACTTTGAGGGTGAAGATAAAAATCAACATCAATGAACCGCTCAAACGAGGGACAAATGTCAA
GATAGGGTCGATGGCAGACAAGAAATGGATACCTATTGTTGATGGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGGCGGGAACCAGACGAGACCGAACGGGCTCGGC
CCGCTCAAGCGGGCCGAGGGTCGGCCTCGGCTCATGGCCGAGGCCAGCAGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTCGCCGGTTTTGCCT
CCTTGGTCCATCTTTCAGCCCGATTCCTCCCCGGTTGTCCTCGTTCATGCCTGCAAGAGAAAAGTTAGGGAAAAGGCTAGGATCGGCCTCGGCCTCAAGCCCCTGAGAAT
ACCTTTAAAGTTTGTGCTTGGCCTCGGCAAGAGGTGCTCGGCCTTGGCAAGAGATTCAGTGTTCGTGGAAGTTTGTGCTGCTCGGCCTCGACTCATTCTCTGGTCAGCCT
CGGCCCTCTGTGGCTTGACAGCTTCGAATGTGCGCCTGAGGGTTGGCTTTGGAACTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGTATTGGAT
TCATCCCAGGGGGACGAAGCTCGGCATTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTTCTCTGTGTTGTTCGCTTGCTTGTTTTCCATTCCAA
GGTAAGAAGATATAATGTCATACCTGGTCTTTTGAGGACAAAGTTCATCTTTGAAGCTGAGGCAGCCGACCCTGACCTTGGCATGAGTGACTACCGGACTCAGTCGAGCC
TCATTCCTTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCATTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCCGGG
CCTCTCTTCAAGCATCACGGTCATCCCAGGGGTGCATACACTCTTCTGGGGAAAAAACTTGGGGAGGCCTGGGAATTTTCCAGGGCCTCTCTTCAAGTGTCGTTGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAATGCTTGGGGAGGCCTGGGAATTTCCCGAGCCTCTCTTCAAGCTACATGGTCATCCCATGGGTGCGTACACTCTTCTGGGGA
AAGGTGCTTGGGGAGGCCGAGGAATTTCCCGAGCCTCTCTTCAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAACGGGCAACGCAAAGGTTTGCATTCAGGAGAATACCCACGAAAACCATCACAAGGAAGACCAAGCGATGGGGGAAGACGATATCCTTGAGGAAGGAATGGG
CAACGAGCAGGTTTGCAATAAGGAAGTGGATGAGATGGACAGAGACTTCAGGAACACCATAGCTTGCAAAATTCTAACATCAACGCTAATCAACCCGGATGTCTTCTCTG
TGATGATGCCTCGAATATGGGGGATCGAAGGAGCAGTAAAAGTTACAAAAGCGGGAAAGAATGTGTACTTATGCAAGAAATATGCTATAGCTTTGGGAAACTCCATTGGA
GAATTTGAAGATGCAGAGTGGGATGAATATGGGAAAATGGAAGGCGACACTTTGAGGGTGAAGATAAAAATCAACATCAATGAACCGCTCAAACGAGGGACAAATGTCAA
GATAGGGTCGATGGCAGACAAGAAATGGATACCTATTGTTGATGGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGGCGGGAACCAGACGAGACCGAACGGGCTCGGC
CCGCTCAAGCGGGCCGAGGGTCGGCCTCGGCTCATGGCCGAGGCCAGCAGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTCGCCGGTTTTGCCT
CCTTGGTCCATCTTTCAGCCCGATTCCTCCCCGGTTGTCCTCGTTCATGCCTGCAAGAGAAAAGTTAGGGAAAAGGCTAGGATCGGCCTCGGCCTCAAGCCCCTGAGAAT
ACCTTTAAAGTTTGTGCTTGGCCTCGGCAAGAGGTGCTCGGCCTTGGCAAGAGATTCAGTGTTCGTGGAAGTTTGTGCTGCTCGGCCTCGACTCATTCTCTGGTCAGCCT
CGGCCCTCTGTGGCTTGACAGCTTCGAATGTGCGCCTGAGGGTTGGCTTTGGAACTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGTATTGGAT
TCATCCCAGGGGGACGAAGCTCGGCATTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTTCTCTGTGTTGTTCGCTTGCTTGTTTTCCATTCCAA
GGTAAGAAGATATAATGTCATACCTGGTCTTTTGAGGACAAAGTTCATCTTTGAAGCTGAGGCAGCCGACCCTGACCTTGGCATGAGTGACTACCGGACTCAGTCGAGCC
TCATTCCTTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCATTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCCGGG
CCTCTCTTCAAGCATCACGGTCATCCCAGGGGTGCATACACTCTTCTGGGGAAAAAACTTGGGGAGGCCTGGGAATTTTCCAGGGCCTCTCTTCAAGTGTCGTTGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAATGCTTGGGGAGGCCTGGGAATTTCCCGAGCCTCTCTTCAAGCTACATGGTCATCCCATGGGTGCGTACACTCTTCTGGGGA
AAGGTGCTTGGGGAGGCCGAGGAATTTCCCGAGCCTCTCTTCAAGCATAA
Protein sequenceShow/hide protein sequence
MDGTGNAKVCIQENTHENHHKEDQAMGEDDILEEGMGNEQVCNKEVDEMDRDFRNTIACKILTSTLINPDVFSVMMPRIWGIEGAVKVTKAGKNVYLCKKYAIALGNSIG
EFEDAEWDEYGKMEGDTLRVKIKININEPLKRGTNVKIGSMADKKWIPIVDGQTRRNRGIQRRREPDETERARPAQAGRGSASAHGRGQQGSGLKPDPFGLGPSHSPVLP
PWSIFQPDSSPVVLVHACKRKVREKARIGLGLKPLRIPLKFVLGLGKRCSALARDSVFVEVCAARPRLILWSASALCGLTASNVRLRVGFGTGMLGLGLGMRLSISSVLD
SSQGDEARHWPLDGRPRPWHEADQLLCVVRLLVFHSKVRRYNVIPGLLRTKFIFEAEAADPDLGMSDYRTQSSLIPCLMVGLSLGMRTSIFPAWLEKFEGSLGRLWDFPG
PLFKHHGHPRGAYTLLGKKLGEAWEFSRASLQVSLSSQGCVHSSGEMLGEAWEFPEPLFKLHGHPMGAYTLLGKGAWGGRGISRASLQA