; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028801 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028801
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:30888555..30890129
RNA-Seq ExpressionLag0028801
SyntenyLag0028801
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]2.4e-4737.27Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS
        E  LG RPSFVWRS+LWGR+++ +G RW+IG+G+ V IY SNWLP   + +  S P L + + V DL   + +W +E  + HF   D   I+RI L N  
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS

Query:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVF
          DQ +W+++K   YSVKSGY++   L   D   SS+S+L Q  W+ +W   +P KIK F WR   N LPT  NL +R +  S +C  C    ED  H  
Subjt:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVF

Query:  WECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDDRNL
         +C + K +W  +  A   + L      ++L  ++ K    + EL++V  W +W  RN  ++    +D  L
Subjt:  WECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDDRNL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]9.8e-5744.91Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFT-GSGHWDEEKIWTHFTTADCEAILRIPLGNL
        E  +   PS++WRS+LWGR+LL +G RWRIGNG SV IY  NW+PN+ +L++ S P LPL S V  L     G W  + +   FT  + + IL IP+G  
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFT-GSGHWDEEKIWTHFTTADCEAILRIPLGNL

Query:  SLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQA-SSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFH
        + ED+ IWN+EK  +YSV+SGY++    N   QA SSS+S   + WW+  WKM++P+KIK F WRL L+RLPT  NL KRG++I+N C  C    ED  H
Subjt:  SLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQA-SSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFH

Query:  VFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWN
        +FW C   ++LW  SKF  L   L       +L    E ++  DFE L V  W +WN RN+  +N
Subjt:  VFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWN

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.9e-4736.16Show/hide
Query:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLED
        LG +PSFVWRS++WGR++L +G RWRIGNG +V +Y +NW+P   + +  S P +   + V +L      W E+ I  HF   D EAI++IPL     ED
Subjt:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLED

Query:  QRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWEC
        Q IW+++K   YSVKSGY++   +   +  S SN    Q  W  +WK+ +P K+K F WR + + LPT +NL K+ +    +C  CH   E   H   EC
Subjt:  QRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWEC

Query:  SMIKSLWCCSKFASLYKSLSGLRFDSLLWALK------EKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD
        +  + +W   ++++L + L G+    ++W L+       KV G +   L+   WA+W  RN  L+ G  ++
Subjt:  SMIKSLWCCSKFASLYKSLSGLRFDSLLWALK------EKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]2.6e-4937.88Show/hide
Query:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLED
        LG  PSF+WRS+LWGR+++++G +WRIGNG S+ ++  NWLP   + +  S P LP  + V +L      W+E  I  HFT  D EAI+RI L    ++D
Subjt:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLED

Query:  QRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWEC
        + IW+++K   YSVKSGY++  +LN++  A  ++SA  +  W+++W + +P KI+ F WR + N LP+ +NL KR +    LC  C+   E  FH    C
Subjt:  QRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWEC

Query:  SMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPD
         +++ +W  ++F    K        SLL  LK + +  D ELL+   W +WN RN+ ++ G  D
Subjt:  SMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPD

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]3.8e-4836.82Show/hide
Query:  RIARAGNELN--LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAI
        R   + N LN  +G  PS++WRS+LWGR+++  G RWRIGNG  V I+ +NW+P  F+ +    P +P  + V +L  G   WDEE I+ HF   D + I
Subjt:  RIARAGNELN--LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAI

Query:  LRIPLGNLSLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHA
         +IPL     ED+ IW+F K+  Y+VKSGY+   +L ++  A  S+S   +  W+ +W + +P KI+ F WR + N LP+ +NL KR +     C +C  
Subjt:  LRIPLGNLSLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHA

Query:  CPEDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD
          E+ FH   +C   K +W  S F    ++  G    SLL  +K   +  D +L  V  WA WN RN  L+ G  ++
Subjt:  CPEDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD

TrEMBL top hitse value%identityAlignment
A0A2H5Q8Y3 Uncharacterized protein2.6e-4737.69Show/hide
Query:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWN
        S +WRS+LWGR+++  G RWRIGNG  V I+ +NW+P  F+ +    P LP  + V +L  G   WDEE I+ HF   D + I +IPL   S ED+ IW+
Subjt:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWN

Query:  FEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKS
        F K+  Y+VKSGY+   +LN++  A  S+S   +  W+ +W + +P KI+ F WR + N LP+ +NL KR +     C +C    E+ FH   +C   K 
Subjt:  FEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKS

Query:  LWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD
        +W  S F +  ++  G    SLL  +K   +  D +L     WA WN RN  L+ G  ++
Subjt:  LWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD

A0A2H5Q972 Uncharacterized protein (Fragment)2.6e-4737.69Show/hide
Query:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWN
        S +WRS+LWGR+++  G RWRIGNG  V I+ +NW+P  F+ +    P LP  + V +L  G   WDEE I+ HF   D + I +IPL   S ED+ IW+
Subjt:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWN

Query:  FEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKS
        F K+  Y+VKSGY+   +LN++  A  S+S   +  W+ +W + +P KI+ F WR + N LP+ +NL KR +     C +C    E+ FH   +C   K 
Subjt:  FEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKS

Query:  LWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD
        +W  S F +  ++  G    SLL  +K   +  D +L     WA WN RN  L+ G  ++
Subjt:  LWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDD

A0A6J1DAR4 uncharacterized protein LOC1110189544.8e-5744.91Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFT-GSGHWDEEKIWTHFTTADCEAILRIPLGNL
        E  +   PS++WRS+LWGR+LL +G RWRIGNG SV IY  NW+PN+ +L++ S P LPL S V  L     G W  + +   FT  + + IL IP+G  
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFT-GSGHWDEEKIWTHFTTADCEAILRIPLGNL

Query:  SLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQA-SSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFH
        + ED+ IWN+EK  +YSV+SGY++    N   QA SSS+S   + WW+  WKM++P+KIK F WRL L+RLPT  NL KRG++I+N C  C    ED  H
Subjt:  SLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQA-SSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFH

Query:  VFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWN
        +FW C   ++LW  SKF  L   L       +L    E ++  DFE L V  W +WN RN+  +N
Subjt:  VFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWN

A0A803PEK8 Uncharacterized protein8.2e-4937.36Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS
        E   G   SFVWRSL+WG++++A G RWR+GNG +V +    WL    + +++  P LP    V DL  G G WDE  + + F   D E IL  P     
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS

Query:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHA-CPEDCFHV
        LED+ +W++ KN  Y+VKSGY++  SL  +     S+  L+  WW +LW + +P KIK F W+L+ N +PT  NL KRG+ + N+C  C     E   H 
Subjt:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHA-CPEDCFHV

Query:  FWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNG
         WEC   K LW  S      K + G    S L  +    +   FE  +V  W +WN RN+++  G
Subjt:  FWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNG

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)3.4e-4737.78Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS
        E  +G  PSF+WRSL WG+ELL +G RWR+G+G S+ +Y   WLP     ++ S P LPL++ V DLFT SG W+   +   F   + +AIL+IPL +L+
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS

Query:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSA---LWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCF
          D  IW++E+N +YSVKSGYRL      +D+ S   SA   L   +W  +W + +P+KIKFF WR + + LP    L  R +  + +C  CH   E   
Subjt:  LEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSA---LWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCF

Query:  HVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPD
        H  W C   K +W  S + ++ +      F  L  AL+   +G +  L     W +WN RNS ++ G  +
Subjt:  HVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPD

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003105.3e-0542Show/hide
Query:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSL
        E ++G RPS+ WRS++ GRELL+RG    IG+G    ++   W+ +E  L
Subjt:  ELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSL

Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.8e-0629.03Show/hide
Query:  WWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLL-WAL-KEKVNGL
        W  ++W      K  F  W  +L+RLPTK  L   GM +   C +C    ED  H+F  C     LW          + S + ++ L+ W L + + +  
Subjt:  WWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLL-WAL-KEKVNGL

Query:  DFELLIV--FWWAVWNFRNSLLWN
            LIV    +A+W  RN+ L N
Subjt:  DFELLIV--FWWAVWNFRNSLLWN

AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.5e-0728.57Show/hide
Query:  WWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLW-CCSKFASLYKSLSGLRFDSLLWAL---KEKVN
        W+ ++W  N   K  F  W ++ NRL T+D L   G+ I  +C++C++  E   H+F+EC    ++W   +  A+L+     +    L+W L   ++K  
Subjt:  WWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLW-CCSKFASLYKSLSGLRFDSLLWAL---KEKVN

Query:  GLDFELLI-VFWWAVWNFRNSLLWNG
         L   L    + +A+W  RN  L  G
Subjt:  GLDFELLI-VFWWAVWNFRNSLLWNG

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0923.51Show/hide
Query:  IGNGSSVPIYFSNWLPNEFSLQV-----HSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWNFEKNDLYSVKSGYRLT
        +G+G +   +  NW+     ++V          LP+ + VRD   G+  W          ++     + + L NL  E Q + + + +D +  K+     
Subjt:  IGNGSSVPIYFSNWLPNEFSLQV-----HSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLSLEDQRIWNFEKNDLYSVKSGYRLT

Query:  HSLNVQDQASSSNSALWQ-----GWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLWCCSKFASLY
        H+ + +  A  + SAL        W  ++W  N   K  F  W ++ NRL T+D L   G+ I   C++C+A  +   H+F+EC     +W   +F +  
Subjt:  HSLNVQDQASSSNSALWQ-----GWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACPEDCFHVFWECSMIKSLWCCSKFASLY

Query:  KSLS--GLRFDSLLWALK-EKVNGLDFELLIVFW---WAVWNFRNSLLWNG
         +L+      D L W L   +   +   + + F    +A+W  RN  L +G
Subjt:  KSLS--GLRFDSLLWALK-EKVNGLDFELLIVFW---WAVWNFRNSLLWNG

AT4G29090.1 Ribonuclease H-like superfamily protein4.0e-2428.67Show/hide
Query:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWL---PNEFSLQVHSFP---YLPLTSC--VRDLFTGSG-HWDEEKIWTHFTTADCEAILRI
        LG RPSFVW+S+   +E+L +G R  +GNG  + I+   WL   P   +L++   P   Y  ++S   V DL   SG  W ++ I   F   + + I  +
Subjt:  LGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWL---PNEFSLQVHSFP---YLPLTSC--VRDLFTGSG-HWDEEKIWTHFTTADCEAILRI

Query:  PLGNLSLEDQRIWNFEKNDLYSVKSGY-RLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACP
          G   + D   W++  +  Y+VKSGY  LT  +N +      +       +  +WK     KI+ F W+   N LP    L  R +   + C+ C +C 
Subjt:  PLGNLSLEDQRIWNFEKNDLYSVKSGY-RLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVICHACP

Query:  EDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDS----LLWALKEKVNGLDFELL--IVFW--WAVWNFRNSLLWNG
        E   H+ ++C+  +  W  S   S+   L G   DS    L W          +E    +V W  W +W  RN L++ G
Subjt:  EDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDS----LLWALKEKVNGLDFELL--IVFW--WAVWNFRNSLLWNG

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.0e-0621.86Show/hide
Query:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNW--------LPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS
        S++W+S+   R +       ++G+G +   +  NW        L  +   +V     LP  + V D          + +W    +     I+++    L 
Subjt:  SFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNW--------LPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEKIWTHFTTADCEAILRIPLGNLS

Query:  LEDQRIWNFE---KNDLYSVKSGYRLTHSLNVQDQASSSNSALW---------QGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVI
        L    + N +   ++DL+  K G         +     S++A W           W  ++W      K  F  W    +RLPT+D LL  G+ + +LC++
Subjt:  LEDQRIWNFE---KNDLYSVKSGYRLTHSLNVQDQASSSNSALW---------QGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVI

Query:  CHACPEDCFHVFWEC
        C+A  E   H+F++C
Subjt:  CHACPEDCFHVFWEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTGGAATGCGTGATAACAGGAGATTTGATGAAGGAGAAAATACAAACTCCAAAAATCAGAATAAGTTCAGCAAGCCAGAGAATCGATGGAAGGACGAAAATGA
CGACAATAGGAGTTGGAGACGACCAGCGACGGCCGGCTTGAGCATGATCGACACGGCGGGGATGAGAAGGGCAGAACCGGTACGGAAAGTGAATAGTGGACAGACTGACA
TGACATCTGGTTCGTCAGAAAAGGCTACAGAGGCTATGGGGGAAAAAGAGAAATTATCAGAGATTAGAGGACTGTTGGGATTAGATAAAGACAAAATAGAAAAGCAAGAT
ATGGGCCAGGGGAATTTAATTATTCAAAACAACCCAAAATTTTCAGCAAGTGGGCCAAAAGGAAAAGAAAAAGTAACCGACAGAAAAGAAGACAAGGAGGAGCTTATACC
AAAATCTTGTCAGGAAAAGGATTCAATGTATGGCAAGGATATTGAATTGAAAGAAGGGAAAAAAGAAAGAAAAGACAAAAACCTGGATGGGAAAAAAAAAGACAATATGA
CTATGCTTTCAAGGTCTATTAAAGATCCACCAAAAGTCTCAAACAAGGAAAAAAGCAAACAAAGTAATTTCTCCAGCCCACCTAAATCGACATCTGAGGAAAAAAAAGAG
CCAGCACCCAAACCTGGAAGCATAAGTCCAAATAGACAAGGGAAAGTCCACAGAAACAATTTTAAGACGTGGAAACGAATAGCAAGAGCGGGTAACGAGTTGAATTTGGG
TCATCGACCTTCTTTTGTTTGGAGGAGTTTACTATGGGGGCGTGAGTTATTGGCAAGAGGATGTCGTTGGCGAATAGGTAATGGCTCTTCTGTTCCTATTTACTTTTCGA
ATTGGCTCCCAAATGAGTTTTCTCTCCAGGTTCACTCTTTCCCTTATTTACCGTTGACTAGTTGTGTTCGGGACTTGTTCACTGGTTCAGGTCATTGGGATGAGGAGAAA
ATTTGGACCCACTTTACCACGGCAGACTGTGAAGCCATTTTGAGGATTCCGCTTGGGAATTTGTCATTAGAGGATCAACGGATATGGAATTTTGAGAAGAACGACCTTTA
CTCTGTTAAAAGTGGCTACCGGTTGACTCATAGTTTGAATGTCCAAGATCAGGCTTCTTCGTCAAACTCGGCCCTATGGCAAGGTTGGTGGTCTAGTCTTTGGAAAATGA
ATGTTCCTAGCAAGATTAAATTCTTTTTTTGGAGACTATCTCTCAATCGTTTGCCCACCAAGGATAACCTTCTTAAAAGAGGTATGGATATTTCTAACTTGTGTGTGATT
TGTCATGCTTGTCCTGAGGACTGTTTTCATGTCTTTTGGGAATGTTCTATGATTAAATCCTTGTGGTGTTGTTCAAAGTTTGCATCCTTATACAAATCTTTGTCTGGTTT
GAGGTTTGATTCACTGTTGTGGGCCTTAAAGGAAAAAGTTAATGGGCTGGATTTTGAGTTGTTGATTGTTTTCTGGTGGGCAGTGTGGAATTTCCGTAATTCTTTATTGT
GGAATGGGAATCCTGATGATAGAAACTTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTGGAATGCGTGATAACAGGAGATTTGATGAAGGAGAAAATACAAACTCCAAAAATCAGAATAAGTTCAGCAAGCCAGAGAATCGATGGAAGGACGAAAATGA
CGACAATAGGAGTTGGAGACGACCAGCGACGGCCGGCTTGAGCATGATCGACACGGCGGGGATGAGAAGGGCAGAACCGGTACGGAAAGTGAATAGTGGACAGACTGACA
TGACATCTGGTTCGTCAGAAAAGGCTACAGAGGCTATGGGGGAAAAAGAGAAATTATCAGAGATTAGAGGACTGTTGGGATTAGATAAAGACAAAATAGAAAAGCAAGAT
ATGGGCCAGGGGAATTTAATTATTCAAAACAACCCAAAATTTTCAGCAAGTGGGCCAAAAGGAAAAGAAAAAGTAACCGACAGAAAAGAAGACAAGGAGGAGCTTATACC
AAAATCTTGTCAGGAAAAGGATTCAATGTATGGCAAGGATATTGAATTGAAAGAAGGGAAAAAAGAAAGAAAAGACAAAAACCTGGATGGGAAAAAAAAAGACAATATGA
CTATGCTTTCAAGGTCTATTAAAGATCCACCAAAAGTCTCAAACAAGGAAAAAAGCAAACAAAGTAATTTCTCCAGCCCACCTAAATCGACATCTGAGGAAAAAAAAGAG
CCAGCACCCAAACCTGGAAGCATAAGTCCAAATAGACAAGGGAAAGTCCACAGAAACAATTTTAAGACGTGGAAACGAATAGCAAGAGCGGGTAACGAGTTGAATTTGGG
TCATCGACCTTCTTTTGTTTGGAGGAGTTTACTATGGGGGCGTGAGTTATTGGCAAGAGGATGTCGTTGGCGAATAGGTAATGGCTCTTCTGTTCCTATTTACTTTTCGA
ATTGGCTCCCAAATGAGTTTTCTCTCCAGGTTCACTCTTTCCCTTATTTACCGTTGACTAGTTGTGTTCGGGACTTGTTCACTGGTTCAGGTCATTGGGATGAGGAGAAA
ATTTGGACCCACTTTACCACGGCAGACTGTGAAGCCATTTTGAGGATTCCGCTTGGGAATTTGTCATTAGAGGATCAACGGATATGGAATTTTGAGAAGAACGACCTTTA
CTCTGTTAAAAGTGGCTACCGGTTGACTCATAGTTTGAATGTCCAAGATCAGGCTTCTTCGTCAAACTCGGCCCTATGGCAAGGTTGGTGGTCTAGTCTTTGGAAAATGA
ATGTTCCTAGCAAGATTAAATTCTTTTTTTGGAGACTATCTCTCAATCGTTTGCCCACCAAGGATAACCTTCTTAAAAGAGGTATGGATATTTCTAACTTGTGTGTGATT
TGTCATGCTTGTCCTGAGGACTGTTTTCATGTCTTTTGGGAATGTTCTATGATTAAATCCTTGTGGTGTTGTTCAAAGTTTGCATCCTTATACAAATCTTTGTCTGGTTT
GAGGTTTGATTCACTGTTGTGGGCCTTAAAGGAAAAAGTTAATGGGCTGGATTTTGAGTTGTTGATTGTTTTCTGGTGGGCAGTGTGGAATTTCCGTAATTCTTTATTGT
GGAATGGGAATCCTGATGATAGAAACTTGTTGTAG
Protein sequenceShow/hide protein sequence
MRGGMRDNRRFDEGENTNSKNQNKFSKPENRWKDENDDNRSWRRPATAGLSMIDTAGMRRAEPVRKVNSGQTDMTSGSSEKATEAMGEKEKLSEIRGLLGLDKDKIEKQD
MGQGNLIIQNNPKFSASGPKGKEKVTDRKEDKEELIPKSCQEKDSMYGKDIELKEGKKERKDKNLDGKKKDNMTMLSRSIKDPPKVSNKEKSKQSNFSSPPKSTSEEKKE
PAPKPGSISPNRQGKVHRNNFKTWKRIARAGNELNLGHRPSFVWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQVHSFPYLPLTSCVRDLFTGSGHWDEEK
IWTHFTTADCEAILRIPLGNLSLEDQRIWNFEKNDLYSVKSGYRLTHSLNVQDQASSSNSALWQGWWSSLWKMNVPSKIKFFFWRLSLNRLPTKDNLLKRGMDISNLCVI
CHACPEDCFHVFWECSMIKSLWCCSKFASLYKSLSGLRFDSLLWALKEKVNGLDFELLIVFWWAVWNFRNSLLWNGNPDDRNLL