; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028804 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028804
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionankyrin repeat-containing protein NPR4-like
Genome locationchr8:30915860..30916171
RNA-Seq ExpressionLag0028804
SyntenyLag0028804
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047903.1 retrotransposon polyprotein [Cucumis melo var. makuwa]3.8e-0547.54Show/hide
Query:  VSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK
        V +A   ++    N  S++FGH  S+VL+VKLDE NY LW  MV+++L  QK+DG+VL  K
Subjt:  VSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK

KGN65642.1 hypothetical protein Csa_019906 [Cucumis sativus]6.3e-0846.25Show/hide
Query:  DSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKKASHLNSWRS
        ++++++     S+ +AP    T   I++SFGHP  T L +KLD+K + LWRGMVLA+L+GQKVDGYVL  K+    S +S
Subjt:  DSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKKASHLNSWRS

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]2.3e-1076.09Show/hide
Query:  ISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK
        I+ SFGHP ST L VKLD+KNY LW+GMVLA+L GQKVDGYVLR K
Subjt:  ISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]5.7e-0955.07Show/hide
Query:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL
        +  +SS    VV+    P  + +P   ++SFGHP  TVL VKLD+KNY LWRGMVLA+L+GQK DGYVL
Subjt:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]5.7e-0955.07Show/hide
Query:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL
        +  +SS    VV+    P  + +P   ++SFGHP  TVL VKLD+KNY LWRGMVLA+L+GQK DGYVL
Subjt:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL

TrEMBL top hitse value%identityAlignment
A0A0A0LXU0 Uncharacterized protein3.1e-0846.25Show/hide
Query:  DSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKKASHLNSWRS
        ++++++     S+ +AP    T   I++SFGHP  T L +KLD+K + LWRGMVLA+L+GQKVDGYVL  K+    S +S
Subjt:  DSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKKASHLNSWRS

A0A5A7TWE0 Retrotransposon polyprotein1.9e-0547.54Show/hide
Query:  VSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK
        V +A   ++    N  S++FGH  S+VL+VKLDE NY LW  MV+++L  QK+DG+VL  K
Subjt:  VSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like1.1e-1076.09Show/hide
Query:  ISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK
        I+ SFGHP ST L VKLD+KNY LW+GMVLA+L GQKVDGYVLR K
Subjt:  ISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKK

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X22.8e-0955.07Show/hide
Query:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL
        +  +SS    VV+    P  + +P   ++SFGHP  TVL VKLD+KNY LWRGMVLA+L+GQK DGYVL
Subjt:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X12.8e-0955.07Show/hide
Query:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL
        +  +SS    VV+    P  + +P   ++SFGHP  TVL VKLD+KNY LWRGMVLA+L+GQK DGYVL
Subjt:  DDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGATAGCTCATCATCCTCCACCGCTGCTGTAGTTTCTTTAGCATTAGCCCCTGTTGTTTCCTCAACCCCTAATATCATCAGCTCATCATTCGGTCATCCGTT
TAGCACAGTCCTGATGGTCAAGCTTGATGAGAAGAACTATCTTCTCTGGAGAGGAATGGTGCTAGCTATTCTCAAAGGGCAGAAAGTAGATGGTTATGTTCTCAGGAAAA
AAGCCAGCCATCTGAACTCGTGGAGGTCTCTATTGAGTCTGGAACTAAGAAGCTTGAGCACAATCCATTGTTTGATGAATGGGTTACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACGATAGCTCATCATCCTCCACCGCTGCTGTAGTTTCTTTAGCATTAGCCCCTGTTGTTTCCTCAACCCCTAATATCATCAGCTCATCATTCGGTCATCCGTT
TAGCACAGTCCTGATGGTCAAGCTTGATGAGAAGAACTATCTTCTCTGGAGAGGAATGGTGCTAGCTATTCTCAAAGGGCAGAAAGTAGATGGTTATGTTCTCAGGAAAA
AAGCCAGCCATCTGAACTCGTGGAGGTCTCTATTGAGTCTGGAACTAAGAAGCTTGAGCACAATCCATTGTTTGATGAATGGGTTACTGTAG
Protein sequenceShow/hide protein sequence
MADDSSSSSTAAVVSLALAPVVSSTPNIISSSFGHPFSTVLMVKLDEKNYLLWRGMVLAILKGQKVDGYVLRKKASHLNSWRSLLSLELRSLSTIHCLMNGLL