; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028809 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028809
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:31128484..31132229
RNA-Seq ExpressionLag0028809
SyntenyLag0028809
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC83784.1 hypothetical protein OsI_29682 [Oryza sativa Indica Group]3.2e-4434.74Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRIL-------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRIC
        +D+L+FF+A+  +  M+K VL+SY  ++GQ +N  K S +      ++  ++   +L       GGK ++IKA+AQAI  Y M  F+LP+ +C+E+ +I 
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRIL-------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRIC

Query:  ARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRW----KVYEGQ---SW--------------
          FWWGS  GK K HW+ W  L KSK+ GGLGF++++AFNQA+LA+ +WR++ N  SL AR LK +          V+ G    +W              
Subjt:  ARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRW----KVYEGQ---SW--------------

Query:  -WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDK
         W++GNG  + +  DPWI R    K +      +   V  ++D N  W E+++R  F+P DA  IL++        D + W  +K
Subjt:  -WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDK

KAF5481481.1 hypothetical protein F2P56_002126 [Juglans regia]1.9e-4429.37Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNI---------------RKQDVDKY-------GR-----------------------
        +DS++F +A+ +    +  +L+ YE+ASGQ VN +K+S + +KN+               + Q  DKY       GR                       
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNI---------------RKQDVDKY-------GR-----------------------

Query:  --ILGGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
            GG+ +LIKAVA +I TY MS F+LP  +C E+  + A+FWWG K  +N+  W  W+ LC+SK   G+GFK+LR FN A+LAK  WRIL+  +SLL 
Subjt:  --ILGGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLKRQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPL-VITDNLKGLKVNSIIDDN-NKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIV
                   K+Y+ +  W+VG+G+ I++  D W+        L  IT      KV+ +ID N N W  E +R    P +A ++LNM +      D +V
Subjt:  RTLKRQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPL-VITDNLKGLKVNSIIDDN-NKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIV

Query:  WR------------------YDKKR---DNWSSMDN---------WEWWIANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPIQIEKIFREHRE
        W                   +D++R   + +SS  N          E  +   K  E+E +VL    +W  +NK +  N K S  Q       +++EH  
Subjt:  WR------------------YDKKR---DNWSSMDN---------WEWWIANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPIQIEKIFREHRE

Query:  RKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLLENFGSGLNVEV
             LS     K   L  Q     P     K+N+D +   +  +  +G ++ D  G  +    +P       I +E   VL GL+       S L  EV
Subjt:  RKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLLENFGSGLNVEV

Query:  ESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRAITCEA
        ESD L V++ LN E E +S   N++  I  M      +  +H  R  N    C A
Subjt:  ESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRAITCEA

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]4.2e-4433.69Show/hide
Query:  LQGSLIVSAALGLLSLQRQGKEGSLAMKLDMN-------------DSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRI
        L  SL +  A GL +L  Q     L   + +N             DS++F +A+ +EC +++ +L  YEEASGQ +N DKSS   + N  ++  D+   I
Subjt:  LQGSLIVSAALGLLSLQRQGKEGSLAMKLDMN-------------DSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRI

Query:  L-----------------------------------------------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHW
        L                                               GGK ILIKAVAQAI TYTMS F LP  +CD++ R+   FWWG +  + K  W
Subjt:  L-----------------------------------------------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHW

Query:  EKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDP
          WK +C SK  GGLGF+ L+AFN AMLAK +WRIL N NSL+ R LK                      R I    +V    + W+VGNG+ I +  D 
Subjt:  EKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDP

Query:  WINRDGCAKPLVITDNLKGLK---VNSIIDDNNK-WKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDKK
        W+      K  VI+  +   +   V+S+ID + K WK E +R  F+P + + IL +P+   L +D ++W  +KK
Subjt:  WINRDGCAKPLVITDNLKGLK---VNSIIDDNNK-WKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDKK

XP_023880941.1 uncharacterized protein LOC111993328 [Quercus suber]2.2e-4527.94Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRILG------------------------------------------
        +DS++F +A+  E   + +VL++YE  SGQ +N +K+S   +KN +++  D+  +I G                                          
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRILG------------------------------------------

Query:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
             G+ ILIKAVAQA  TYTMS F LP+ +C ++N + + FWWG K  + K  W  W+ LC  K++GGLGF++LRAFN A+LAK  WRI +N NSL  
Subjt:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIID-DNNKWKEEVIRGSFIP
        + LK                      R I+   ++ E  S W +GNG ++D+  D WI      K +    +L   KV  ++D     W  + +R SF+P
Subjt:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIID-DNNKWKEEVIRGSFIP

Query:  EDAKDILNMPIGDALSKDDIVWRYDK--KRDNWSSMDNWEWWIANIKKEELELVVLTMKVVWQFKNKK---------------LNNNN--KH-SKFQIPI
         +A+ IL + I      D ++W   K  K    S+    + W+     +  E +    +VVW+ K +K                N+ N  KH  K +   
Subjt:  EDAKDILNMPIGDALSKDDIVWRYDK--KRDNWSSMDNWEWWIANIKKEELELVVLTMKVVWQFKNKK---------------LNNNN--KH-SKFQIPI

Query:  QIEKIFREHRERKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLL
        +I K   ++   KE+    +N  +  ++ +    S P   ++K+N D +  +D+G   +G ++ +++G  + A  + +      +  EA  V EG   +L
Subjt:  QIEKIFREHRERKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLL

Query:  ENFGSGL-NVEVESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRA
          +  GL  +E+ESD L VI  L N D +   I  +IE ++            H  R  N A
Subjt:  ENFGSGL-NVEVESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRA

XP_024190496.1 uncharacterized protein LOC112194497 [Rosa chinensis]3.8e-5327.79Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRK------------QDVDKYGRILG------------------------------
        +DS+++ +A  ++C  I+EVL++Y  ASGQ VN DKSS + +KN+              + VD + + LG                              
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRK------------QDVDKYGRILG------------------------------

Query:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
             GK ILI+ VAQ++STY MS F+L N  C++I ++CARFWWGS   K K HW  W  LC SK++GGLGF+ L  FN AMLAK +WRI+ + NSL+A
Subjt:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKP-LVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIP
        R                         R IL   ++     +W++GNG  + +  DPWI      KP L        LKV+ +    + W E  IR  F  
Subjt:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKP-LVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIP

Query:  EDAKDILNMPIGDALSKDDIVWRYDKKRDNWSSMDNWEWWI---ANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPIQIEKIFREHRERKEVNL
          A+ IL +P+    ++D +V                EW I     + K   E +++ +  +W+ +N ++  + +     + I+      E+R      L
Subjt:  EDAKDILNMPIGDALSKDDIVWRYDKKRDNWSSMDNWEWWI---ANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPIQIEKIFREHRERKEVNL

Query:  SRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLLENFGSGLNVEVESDCLQ
          +   +     N      P+    K+N+D S+      G LG+++ DS+G  +  G+RP+   +S    EA    E ++ +LE+  + + +E +S  +Q
Subjt:  SRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLLENFGSGLNVEVESDCLQ

Query:  VIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRAITCEATSMASTSRKFCVEQGSSSTLEEESLFWSLPLMVL
            L++E    S I  + E I+A+      L   H  R  N+     AT               ++TL++ + F+S P  ++
Subjt:  VIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRAITCEATSMASTSRKFCVEQGSSSTLEEESLFWSLPLMVL

TrEMBL top hitse value%identityAlignment
A0A2K3PIK7 Ribonuclease H3.8e-4333.33Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQD------------VDKYGRILG------------------------------
        +DSL+F +AS  E  +I  VL  Y++ASGQ VNLDKS    ++N+R +D            VD + + LG                              
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQD------------VDKYGRILG------------------------------

Query:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
             GK ILIKAVAQAI  Y M  ++LPN  C EI  + A+FWWGSKGG+ K HW  W+ L K+K  GG+GF+ +  FN+A+L K  WR++    SL+ 
Subjt:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLKRQILQRWKVYEGQ-------SW---------------WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLK-GLKVNSIID-DNNKWKEEVIRGSFI
        R  K +   R    E +       +W               W++GNG  + +  D W+      K     + L+ G  V+++ID D  +W  +++  +F 
Subjt:  RTLKRQILQRWKVYEGQ-------SW---------------WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLK-GLKVNSIID-DNNKWKEEVIRGSFI

Query:  PEDAKDILNMPIGDALSKDDIVWRYDK
        P++AK IL++PI   L  D I+W Y++
Subjt:  PEDAKDILNMPIGDALSKDDIVWRYDK

A0A2N9FM05 Reverse transcriptase domain-containing protein1.5e-4427.73Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIR---KQDV------------DKY----------------------GRILG-----
        +DS++F +AS +EC ++K+VLK YE+ASGQ +N++K+S   + N     K+++            +KY                      GR +G     
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIR---KQDV------------DKY----------------------GRILG-----

Query:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
             GK ILIKAVAQAI TY MS FRLP  +CDEIN + + +WWG K G+ K HW  WK L  SK++GG+GF++LR FN A+LA+  WRI++N +SLL 
Subjt:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIID-----DNNKWKEEVIRG
        R LK                      R IL   ++    + W+VGNG  I +  D WI      K   +   +  L+ N+ +D     D   W   +I  
Subjt:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIID-----DNNKWKEEVIRG

Query:  SFIPEDAKDILNMPIGDALSKDDIVWRYDK----------------KRDNWSSMDNWEWWIANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPI
         F   +A  I ++P+    S D I+W   K                K+   SS ++      ++   ++EL+      +W  +N ++ +N   +   I  
Subjt:  SFIPEDAKDILNMPIGDALSKDDIVWRYDK----------------KRDNWSSMDNWEWWIANIKKEELELVVLTMKVVWQFKNKKLNNNNKHSKFQIPI

Query:  QIEKIFREHRERKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLL
        Q   +  +   +++ +  ++     +        + PS + +KIN+   W      G  G ++ DS GS I A     ++    + L A  + + L    
Subjt:  QIEKIFREHRERKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEATTVLEGLRSLL

Query:  ENFGSGLNVEVESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQN
        E     L   VE DC  ++  L      L+    +++ I  ++ L     F   PR+ N
Subjt:  ENFGSGLNVEVESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQN

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.2e-4437.58Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKN---------------IRKQDVDKY------------------------------GR
        +DSL+F +A+++EC  +KE+L+ YE ASGQ VN DKSS   + N               ++    +KY                              G+
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKN---------------IRKQDVDKY------------------------------GR

Query:  IL--GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
        +L  GGK ILIKAVAQAI TYTMS F LP  +CDE+ ++   FWWG K  ++K  W  W+ +CK K  GGLGF+ L AFN A+LAK +WRIL N  SL A
Subjt:  IL--GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAK---PLVITDNLKGLKVNSIID-DNNKWKEEVIRGS
        R LK                      R I    +V +  + W+VGNGR I + +D W+      K   P  IT++     V+S+ID D   WK + IR  
Subjt:  RTLK----------------------RQILQRWKVYEGQSWWKVGNGRYIDMDNDPWINRDGCAK---PLVITDNLKGLKVNSIID-DNNKWKEEVIRGS

Query:  FIPEDAKDILNMPIGDALSKDDIVWRYDKK
        F+P DA+ IL +P+   L  D I+W  +KK
Subjt:  FIPEDAKDILNMPIGDALSKDDIVWRYDKK

A0A803PM68 Uncharacterized protein4.1e-4536Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRK------------QDVDKYGRILG------------------------------
        +DSL+F +A++ EC   +E+L+ Y  ASGQ VN  KS     + +              + VD YG+ LG                              
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRK------------QDVDKYGRILG------------------------------

Query:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA
             GK ILIKA+ QAI TYTMS FRLP K  + I+ + ARFWWGS     K HW KW +LCK K+QGGLGF++L  FNQA+LAK  WR +R  NSL +
Subjt:  -----GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLA

Query:  RTLKRQILQRWKVYEGQS------------W----------WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPE
        + LK        V E +S            W          W++GNG  + +  DPW+ R    K        +G+ V  ++  N +W EE IR  F P 
Subjt:  RTLKRQILQRWKVYEGQS------------W----------WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPE

Query:  DAKDILNMPIGDALSKDDIVWRYDK
        DA+ IL MP  +   +D I+W Y K
Subjt:  DAKDILNMPIGDALSKDDIVWRYDK

B8BC08 Reverse transcriptase domain-containing protein1.5e-4434.74Show/hide
Query:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRIL-------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRIC
        +D+L+FF+A+  +  M+K VL+SY  ++GQ +N  K S +      ++  ++   +L       GGK ++IKA+AQAI  Y M  F+LP+ +C+E+ +I 
Subjt:  NDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRIL-------GGKTILIKAVAQAISTYTMSFFRLPNKICDEINRIC

Query:  ARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRW----KVYEGQ---SW--------------
          FWWGS  GK K HW+ W  L KSK+ GGLGF++++AFNQA+LA+ +WR++ N  SL AR LK +          V+ G    +W              
Subjt:  ARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRW----KVYEGQ---SW--------------

Query:  -WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDK
         W++GNG  + +  DPWI R    K +      +   V  ++D N  W E+++R  F+P DA  IL++        D + W  +K
Subjt:  -WKVGNGRYIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657506.5e-1629.82Show/hide
Query:  GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKR
        G+  L KAV  ++  ++MS   LP  I + ++++   F WGS   K K H  KW  +C  K +GGLG +  ++ N+A+++K  WR+L+  NSL    L++
Subjt:  GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKR

Query:  QIL------QRWKVYEGQSW--------------------WKVGNGRYIDMDNDPWINRDGCAKPLVITDN
        +         RW + +G SW                    W  G+G+ I    D W++     KPL+  DN
Subjt:  QIL------QRWKVYEGQSW--------------------WKVGNGRYIDMDNDPWINRDGCAKPLVITDN

P93295 Uncharacterized mitochondrial protein AtMg003108.5e-1638.98Show/hide
Query:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSK-DQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRWKVYE
        A+  Y MS FRL   +C ++      FWW S   K K  W  W+ LCKSK D GGLGF++L  FNQA+LAK S+RI+   ++LL+R L+ +      + E
Subjt:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSK-DQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRWKVYE

Query:  -------GQSWWKVGNGR
                 +W  + +GR
Subjt:  -------GQSWWKVGNGR

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.1e-0929.23Show/hide
Query:  GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKR
        G+  LI +V  +++ + MS FRLP+    EI+ IC+ F W       K     W  +C  KD+GGLG + L+  N+     + W I  + N+ L   + +
Subjt:  GKTILIKAVAQAISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKR

Query:  QILQRWKVYEGQSWWKVGNGRYIDMDNDPW
        +IL+   +  G     + NG       D W
Subjt:  QILQRWKVYEGQSWWKVGNGRYIDMDNDPW

AT4G29090.1 Ribonuclease H-like superfamily protein7.6e-2028.82Show/hide
Query:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQR------
        A+ TYTM+ F LP  +C +I  + A FWW +K      HW+ W  L   K +GG+GFK++ AFN A+L K  WR+L    SL+A+  K +   +      
Subjt:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQR------

Query:  ---------WK-VYEGQSWWK------VGNGRYIDMDNDPWIN--------RDGCAKPLVITDNLKGLKVNSIIDDNNK-WKEEVIRGSFIPEDAKDILN
                 WK ++  Q   +      VGNG  I +    W++        R     P         LKV+ +ID++ + W+++VI   F   + K I  
Subjt:  ---------WK-VYEGQSWWK------VGNGRYIDMDNDPWIN--------RDGCAKPLVITDNLKGLKVNSIIDDNNK-WKEEVIRGSFIPEDAKDILN

Query:  MPIGDALSKDDIVWRYDKKRDNWSSMDNW
        +  G     D   W Y    D       W
Subjt:  MPIGDALSKDDIVWRYDKKRDNWSSMDNW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.0e-1738.98Show/hide
Query:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSK-DQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRWKVYE
        A+  Y MS FRL   +C ++      FWW S   K K  W  W+ LCKSK D GGLGF++L  FNQA+LAK S+RI+   ++LL+R L+ +      + E
Subjt:  AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSK-DQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRWKVYE

Query:  -------GQSWWKVGNGR
                 +W  + +GR
Subjt:  -------GQSWWKVGNGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGTAGCCAG
GGGTCCATTAGGTCCCACCGATGACTCAATTAAGAAACTCTCTCCAGAAAAATCCCTTGTTTGCTCTCTCAAATCCTCTCTGCATTTTTCCCCTAAGAAACTAGATCCCA
CCATCTCCCTCACCGTTACCTTTCAGAGTCCATTGGTGAATCCTTGTGGTGGTGTTCGTGTGGGATTCGTAGCTAAGATCAAGTTCGTTTGCTGCTGGTTTTCTGCAAAC
ATCAAGGAAAAAGCGTTTTTCTTAAGAACTCTTCAAGGGTCTCTGATCGTTTCCGCTGCGCTAGGGCTCTTATCCCTACAGAGACAGGGTAAAGAAGGAAGCTTAGCAAT
GAAACTAGACATGAATGACAGTCTCATATTCTTTCAAGCTTCGAAAAAGGAGTGCATCATGATCAAAGAGGTGTTAAAGTCTTATGAGGAAGCGTCAGGCCAGACGGTTA
ATTTAGACAAATCATCCTTCATGGCTAATAAAAACATTAGAAAGCAAGATGTTGACAAATATGGTAGGATCCTGGGAGGCAAAACGATTCTCATCAAAGCAGTGGCGCAA
GCAATCTCCACATACACGATGAGTTTCTTTAGGCTCCCTAACAAAATCTGCGACGAAATCAACCGTATTTGTGCAAGATTTTGGTGGGGCTCAAAAGGAGGCAAGAACAA
GACGCACTGGGAGAAGTGGAAATCGTTATGCAAGAGCAAAGATCAAGGAGGATTGGGTTTTAAAGAGTTACGAGCTTTCAATCAAGCTATGCTAGCTAAGACCAGTTGGC
GCATCCTCAGAAACCTAAATAGTCTCCTTGCTAGAACTCTGAAAAGGCAGATACTTCAAAGATGGAAAGTTTATGAGGGCCAATCTTGGTGGAAGGTGGGGAATGGGAGA
TACATTGATATGGACAACGACCCGTGGATTAACAGAGATGGATGTGCTAAACCTCTGGTCATTACTGACAACTTGAAAGGGTTAAAAGTTAACTCGATTATTGATGATAA
CAATAAGTGGAAGGAAGAGGTTATTAGAGGAAGTTTTATTCCAGAAGATGCGAAAGATATACTAAACATGCCCATTGGAGATGCTTTGTCTAAAGATGATATAGTGTGGC
GTTATGATAAAAAAAGGGATAATTGGAGCAGCATGGACAACTGGGAATGGTGGATTGCAAACATTAAGAAAGAAGAGCTGGAGTTGGTTGTGCTAACTATGAAGGTAGTG
TGGCAATTCAAAAATAAAAAACTAAACAACAACAACAAGCACTCAAAATTCCAGATTCCCATCCAAATTGAAAAGATTTTTCGCGAGCACAGAGAAAGGAAAGAGGTGAA
CCTGTCAAGGGTGAATGCATTCAAAGGAGAGAACCTTCAGAATCAAGGAGCTCGGTCCCTCCCTTCGTATAATTTCTGGAAAATTAACTTGGATGCCTCTTGGAGCGAAG
ATTTAGGCAAAGGCAGTCTTGGGTGGTTGGTTTGTGATTCAGAAGGGTCTCCCATCTGCGCAGGTCTGAGACCCATTGCGAGGAAATGGTCAATCATCGTCCTAGAAGCC
ACAACAGTGCTGGAAGGGTTGAGATCCTTACTCGAGAACTTCGGTAGTGGTCTAAACGTTGAAGTCGAATCCGATTGCCTACAAGTTATCAGATGCCTAAACAATGAAGA
TGAAATTCTTTCAGAAATCAAGAACATTATTGAAGCCATCATTGCCATGACACCCCTTGTTAATGTGCTTACCTTCAAGCACTGCCCGCGAGCTCAGAATAGGGCCATCA
CGTGCGAGGCTACCTCCATGGCCTCTACTTCACGCAAATTTTGTGTCGAGCAAGGAAGTTCTTCCACGTTGGAAGAGGAGTCGCTTTTTTGGTCCCTTCCCTTGATGGTT
TTGGTCTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGTAGCCAG
GGGTCCATTAGGTCCCACCGATGACTCAATTAAGAAACTCTCTCCAGAAAAATCCCTTGTTTGCTCTCTCAAATCCTCTCTGCATTTTTCCCCTAAGAAACTAGATCCCA
CCATCTCCCTCACCGTTACCTTTCAGAGTCCATTGGTGAATCCTTGTGGTGGTGTTCGTGTGGGATTCGTAGCTAAGATCAAGTTCGTTTGCTGCTGGTTTTCTGCAAAC
ATCAAGGAAAAAGCGTTTTTCTTAAGAACTCTTCAAGGGTCTCTGATCGTTTCCGCTGCGCTAGGGCTCTTATCCCTACAGAGACAGGGTAAAGAAGGAAGCTTAGCAAT
GAAACTAGACATGAATGACAGTCTCATATTCTTTCAAGCTTCGAAAAAGGAGTGCATCATGATCAAAGAGGTGTTAAAGTCTTATGAGGAAGCGTCAGGCCAGACGGTTA
ATTTAGACAAATCATCCTTCATGGCTAATAAAAACATTAGAAAGCAAGATGTTGACAAATATGGTAGGATCCTGGGAGGCAAAACGATTCTCATCAAAGCAGTGGCGCAA
GCAATCTCCACATACACGATGAGTTTCTTTAGGCTCCCTAACAAAATCTGCGACGAAATCAACCGTATTTGTGCAAGATTTTGGTGGGGCTCAAAAGGAGGCAAGAACAA
GACGCACTGGGAGAAGTGGAAATCGTTATGCAAGAGCAAAGATCAAGGAGGATTGGGTTTTAAAGAGTTACGAGCTTTCAATCAAGCTATGCTAGCTAAGACCAGTTGGC
GCATCCTCAGAAACCTAAATAGTCTCCTTGCTAGAACTCTGAAAAGGCAGATACTTCAAAGATGGAAAGTTTATGAGGGCCAATCTTGGTGGAAGGTGGGGAATGGGAGA
TACATTGATATGGACAACGACCCGTGGATTAACAGAGATGGATGTGCTAAACCTCTGGTCATTACTGACAACTTGAAAGGGTTAAAAGTTAACTCGATTATTGATGATAA
CAATAAGTGGAAGGAAGAGGTTATTAGAGGAAGTTTTATTCCAGAAGATGCGAAAGATATACTAAACATGCCCATTGGAGATGCTTTGTCTAAAGATGATATAGTGTGGC
GTTATGATAAAAAAAGGGATAATTGGAGCAGCATGGACAACTGGGAATGGTGGATTGCAAACATTAAGAAAGAAGAGCTGGAGTTGGTTGTGCTAACTATGAAGGTAGTG
TGGCAATTCAAAAATAAAAAACTAAACAACAACAACAAGCACTCAAAATTCCAGATTCCCATCCAAATTGAAAAGATTTTTCGCGAGCACAGAGAAAGGAAAGAGGTGAA
CCTGTCAAGGGTGAATGCATTCAAAGGAGAGAACCTTCAGAATCAAGGAGCTCGGTCCCTCCCTTCGTATAATTTCTGGAAAATTAACTTGGATGCCTCTTGGAGCGAAG
ATTTAGGCAAAGGCAGTCTTGGGTGGTTGGTTTGTGATTCAGAAGGGTCTCCCATCTGCGCAGGTCTGAGACCCATTGCGAGGAAATGGTCAATCATCGTCCTAGAAGCC
ACAACAGTGCTGGAAGGGTTGAGATCCTTACTCGAGAACTTCGGTAGTGGTCTAAACGTTGAAGTCGAATCCGATTGCCTACAAGTTATCAGATGCCTAAACAATGAAGA
TGAAATTCTTTCAGAAATCAAGAACATTATTGAAGCCATCATTGCCATGACACCCCTTGTTAATGTGCTTACCTTCAAGCACTGCCCGCGAGCTCAGAATAGGGCCATCA
CGTGCGAGGCTACCTCCATGGCCTCTACTTCACGCAAATTTTGTGTCGAGCAAGGAAGTTCTTCCACGTTGGAAGAGGAGTCGCTTTTTTGGTCCCTTCCCTTGATGGTT
TTGGTCTTTGGTTGA
Protein sequenceShow/hide protein sequence
MGPTLFMAREGLLFVGWTSNRLFIRGALVLKDQEVARGPLGPTDDSIKKLSPEKSLVCSLKSSLHFSPKKLDPTISLTVTFQSPLVNPCGGVRVGFVAKIKFVCCWFSAN
IKEKAFFLRTLQGSLIVSAALGLLSLQRQGKEGSLAMKLDMNDSLIFFQASKKECIMIKEVLKSYEEASGQTVNLDKSSFMANKNIRKQDVDKYGRILGGKTILIKAVAQ
AISTYTMSFFRLPNKICDEINRICARFWWGSKGGKNKTHWEKWKSLCKSKDQGGLGFKELRAFNQAMLAKTSWRILRNLNSLLARTLKRQILQRWKVYEGQSWWKVGNGR
YIDMDNDPWINRDGCAKPLVITDNLKGLKVNSIIDDNNKWKEEVIRGSFIPEDAKDILNMPIGDALSKDDIVWRYDKKRDNWSSMDNWEWWIANIKKEELELVVLTMKVV
WQFKNKKLNNNNKHSKFQIPIQIEKIFREHRERKEVNLSRVNAFKGENLQNQGARSLPSYNFWKINLDASWSEDLGKGSLGWLVCDSEGSPICAGLRPIARKWSIIVLEA
TTVLEGLRSLLENFGSGLNVEVESDCLQVIRCLNNEDEILSEIKNIIEAIIAMTPLVNVLTFKHCPRAQNRAITCEATSMASTSRKFCVEQGSSSTLEEESLFWSLPLMV
LVFG