; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028821 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028821
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionupstream activation factor subunit UAF30
Genome locationchr8:31337461..31339300
RNA-Seq ExpressionLag0028821
SyntenyLag0028821
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603170.1 hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4594Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022928748.1 upstream activation factor subunit UAF30 [Cucurbita moschata]1.1e-4594Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022967913.1 protein TRI1 isoform X1 [Cucurbita maxima]1.9e-4594Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022967914.1 upstream activation factor subunit UAF30 isoform X2 [Cucurbita maxima]1.9e-4594Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_038882021.1 upstream activation factor subunit spp27 [Benincasa hispida]7.6e-4795Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLP+R+K  ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

TrEMBL top hitse value%identityAlignment
A0A151SBL4 Upstream activation factor subunit UAF302.2e-4489Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+K  ITDNPKKLANLIDL+NLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDP NKNVV CDEKLKSILLGKP+V+LAELPALIK+HFPK PK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A1S3BL41 upstream activation factor subunit spp275.9e-4591Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        M  +R+K  +TDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVV+CDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1ELR1 upstream activation factor subunit UAF305.3e-4694Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HWJ0 protein TRI1 isoform X19.1e-4694Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HY33 upstream activation factor subunit UAF30 isoform X29.1e-4694Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp272.8e-0744.23Show/hide
Query:  VNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI
        + L   L +F+G  Q+SR    K +W YIK ++LQDP +K  ++CD+KLKS+
Subjt:  VNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI

Q05024 Protein TRI15.2e-0629.03Show/hide
Query:  DNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPKFLSH
        D+P   +  +  V L + L+ F+G  ++ R    K +W YIK ++LQ+P ++  ++CDEK++ I  GK K+ +  +  L+  H     + + H
Subjt:  DNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPKFLSH

Q08747 Upstream activation factor subunit UAF304.7e-0731Show/hide
Query:  QRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPKFLS
        ++ K T++ +P         V L  +L   +G+ +++R    + +W+YIK +NLQ+P NK  ++CDEKL+ ++LGK    + E+  ++  H  + PK +S
Subjt:  QRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPKFLS

Q2TBN1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 12.2e-0436.51Show/hide
Query:  KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELP-ALIKLHFPKNPKFLSHILS
        + +W YIKT+ LQDP  +  VICD+ L+ I   + +++ +E+P  L  L  P  P  ++H++S
Subjt:  KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELP-ALIKLHFPKNPKFLSHILS

Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 12.2e-0436.51Show/hide
Query:  KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELP-ALIKLHFPKNPKFLSHILS
        + +W YIKT+ LQDP  +  VICD+ L+ I   + +++ +E+P  L  L  P  P  ++H++S
Subjt:  KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELP-ALIKLHFPKNPKFLSHILS

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein7.7e-1344.93Show/hide
Query:  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
        L  F G+ +++R    K VW Y+K +NLQ+P NK  + CD+KLK+I  GK KV + E+  L+  HFPK+
Subjt:  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT2G35605.1 SWIB/MDM2 domain superfamily protein4.8e-1541.77Show/hide
Query:  LIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
        ++ +V +   L +F+G++++SR    K +W YIK NNLQ+P NK  ++CDE+LK+I  GK  V   E+  L+  HFPK+
Subjt:  LIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT4G26810.1 SWIB/MDM2 domain superfamily protein3.8e-4486Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQDP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G26810.2 SWIB/MDM2 domain superfamily protein3.8e-4486Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQDP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.5e-1146.97Show/hide
Query:  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF
        ++D VG  +I R    K +W+YIK ++LQDP NK  ++CDEKLK I  GK +V   E+  LI  HF
Subjt:  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCACAACGATTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTC
CCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGA
GTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTTTCTTTCACATATATTATCAGAGAATTAT
TTGACTTTTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCCACAACGATTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTC
CCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGA
GTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTTTCTTTCACATATATTATCAGAGAATTAT
TTGACTTTTGCATAG
Protein sequenceShow/hide protein sequence
MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPKFLSHILSENY
LTFA