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Lag0028822 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028822
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:31383323..31383722
RNA-Seq ExpressionLag0028822
SyntenyLag0028822
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4268750.1 unnamed protein product [Prunus armeniaca]1.3e-2141.91Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV
        +YW+QRSR  WLK  DRNTK+FH++AS R +RNTISG+ED +G+WQ                                +  RV+  M++ L  D++ +E+
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN
        +  +   HPSKAPGPDGF  LFYQ+YWD+VG  +V+
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]9.7e-2039.85Show/hide
Query:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEVEW
        W+QRSR  WL   DRNTK+FH +AS R +RNTI+G+ D +G WQ                                IP  VT  M+  L Q+++R+E+E 
Subjt:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEVEW

Query:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV
         +   HP+KAPGPDG  A+F+Q+YW++VG  +V
Subjt:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]8.2e-1938.81Show/hide
Query:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMW-------------------------------QHIPRRVTLAMSQILTQDYSRDEVEW
        W+QRS+ +W +  DRNTK+FH RAS R K+N+ISG+ + DG+W                                 IPRRVT  M+  LT+ ++ +EV  
Subjt:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMW-------------------------------QHIPRRVTLAMSQILTQDYSRDEVEW

Query:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN
         ++  HP+KAP PDG  A+F+  YWD+VGP + N
Subjt:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN

XP_030924923.1 uncharacterized protein LOC115951949 [Quercus lobata]5.7e-2038.52Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV
        +YW QRSR NWLK+ DRNTK+FH +AS R ++N I GV D    W                                 +P++VT+ M +IL+++YS +E+
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV
        + V+    P+KAPGPDG  ALFYQ++W +VG  ++
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV

XP_030968750.1 uncharacterized protein LOC115989220 [Quercus lobata]1.6e-1938.97Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDG-------------------------------MWQHIPRRVTLAMSQILTQDYSRDEV
        M+W+QRSR  WL   DRNTK+FHHRAS R K+NTI+G+ + +G                               +   +P +VT+ M+  LT+D++ +EV
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDG-------------------------------MWQHIPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN
           +   HP+KAPGPDG  A+FYQ+YW +VG  + N
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN

TrEMBL top hitse value%identityAlignment
A0A2N9J109 Uncharacterized protein2.7e-2039.1Show/hide
Query:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMW-------------------------------QHIPRRVTLAMSQILTQDYSRDEVEW
        W+QRSR  WLK+ DRNT +FH RA++R +RN I G+ DTDG+W                               Q +P  VT +M++ LT+ Y+  EVE+
Subjt:  WKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMW-------------------------------QHIPRRVTLAMSQILTQDYSRDEVEW

Query:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV
         +R   P  APGPDG P +FYQ +W L+G  ++
Subjt:  VVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV

A0A6J5TXB8 Reverse transcriptase domain-containing protein6.5e-2241.91Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV
        +YW+QRSR  WLK  DRNTK+FH++AS R +RNTISG+ED +G+WQ                                +  RV+  M++ L  D++ +E+
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQH-------------------------------IPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN
        +  +   HPSKAPGPDGF  LFYQ+YWD+VG  +V+
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVN

A0A803NPX3 Uncharacterized protein7.2e-2146.08Show/hide
Query:  YWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQHIPRRVTLAMSQILTQDYSRDEVEWVVRNFHPSKAPGPDGFPALFYQRYWDLVGP
        +W+QRSR  WLK  D+NTK+FH +AS R  +N I G+ D +  W+ IP R++ A +  L + +S ++V   +R  HP KAPG DG P LFY++YW L+GP
Subjt:  YWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQHIPRRVTLAMSQILTQDYSRDEVEWVVRNFHPSKAPGPDGFPALFYQRYWDLVGP

Query:  QM
        ++
Subjt:  QM

M5VU98 Reverse transcriptase domain-containing protein2.7e-2040Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQ-------------------------------HIPRRVTLAMSQILTQDYSRDEV
        +YW QRSRENWLK  D+NT +FH +A+ R +RN I G+ED++G W+                                +  +VT  M Q+L  D+S  E+
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQ-------------------------------HIPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV
        +  V    PSKAPGPDG P LFYQ+YW +VG  +V
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV

M5XHI9 Reverse transcriptase domain-containing protein2.7e-2040Show/hide
Query:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQ-------------------------------HIPRRVTLAMSQILTQDYSRDEV
        +YW QRSRENWLK  D+NT +FH +A+ R +RN I G+ED++G W+                                +  +VT  M Q+L  D+S  E+
Subjt:  MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQ-------------------------------HIPRRVTLAMSQILTQDYSRDEV

Query:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV
        +  V    PSKAPGPDG P LFYQ+YW +VG  +V
Subjt:  EWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTGGAAACAGCGATCGCGAGAGAATTGGCTAAAATGGGAGGACCGTAACACAAAATGGTTCCATCACCGAGCATCTTATAGGCATAAAAGGAACACGATCAGTGG
TGTGGAGGATACAGATGGGATGTGGCAGCACATACCTAGAAGAGTTACTCTAGCCATGAGTCAAATTCTTACTCAGGATTATTCTCGAGATGAGGTGGAATGGGTGGTTC
GAAATTTCCATCCTTCAAAAGCACCAGGTCCAGATGGCTTTCCTGCTTTATTTTATCAAAGATACTGGGATTTGGTTGGTCCTCAGATGGTGAATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTGGAAACAGCGATCGCGAGAGAATTGGCTAAAATGGGAGGACCGTAACACAAAATGGTTCCATCACCGAGCATCTTATAGGCATAAAAGGAACACGATCAGTGG
TGTGGAGGATACAGATGGGATGTGGCAGCACATACCTAGAAGAGTTACTCTAGCCATGAGTCAAATTCTTACTCAGGATTATTCTCGAGATGAGGTGGAATGGGTGGTTC
GAAATTTCCATCCTTCAAAAGCACCAGGTCCAGATGGCTTTCCTGCTTTATTTTATCAAAGATACTGGGATTTGGTTGGTCCTCAGATGGTGAATGACTAA
Protein sequenceShow/hide protein sequence
MYWKQRSRENWLKWEDRNTKWFHHRASYRHKRNTISGVEDTDGMWQHIPRRVTLAMSQILTQDYSRDEVEWVVRNFHPSKAPGPDGFPALFYQRYWDLVGPQMVND