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Lag0028827 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028827
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotodermal factor 1-like
Genome locationchr8:31520911..31521242
RNA-Seq ExpressionLag0028827
SyntenyLag0028827
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647347.1 hypothetical protein Csa_003649 [Cucumis sativus]5.8e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
XP_011657562.2 protodermal factor 1 isoform X1 [Cucumis sativus]5.8e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
XP_016900774.1 PREDICTED: protodermal factor 1-like isoform X1 [Cucumis melo]7.6e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
XP_016900775.1 PREDICTED: protodermal factor 1-like isoform X2 [Cucumis melo]7.6e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
XP_031743089.1 protodermal factor 1 isoform X2 [Cucumis sativus]5.8e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
TrEMBL top hitse value%identityAlignment
A0A0A0KGQ1 Uncharacterized protein2.8e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
A0A1S4DXR0 protodermal factor 1-like isoform X13.7e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
A0A1S4DYH9 protodermal factor 1-like isoform X23.7e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSNT+ D L  LYREGAA  +NSMVNNR+
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
A0A6J1D1H1 protodermal factor 1-like3.7e-1571.93Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ +AFGI NAPG GA LSLPQALSN++ D L  LYREGAA+ +NSMVNNRF
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
B5G4Z8 PDF6.3e-1568.42Show/hide
Query:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+ NAFG+ NAPG+G  +SLPQALSNT+ D L  LYREG A+ +NSMVNNRF
Subjt:  VGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
SwissProt top hitse value%identityAlignment
Q9S728 Protodermal factor 12.9e-0949.18Show/hide
Query:  VGWWGTLDNAFGI----KNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+  AFG      + PG    ++L QALSNT+ D +  LYREG A+ +NSMVN++F
Subjt:  VGWWGTLDNAFGI----KNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
Arabidopsis top hitse value%identityAlignment
AT2G42840.1 protodermal factor 12.1e-1049.18Show/hide
Query:  VGWWGTLDNAFGI----KNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF
        +GWWGT+  AFG      + PG    ++L QALSNT+ D +  LYREG A+ +NSMVN++F
Subjt:  VGWWGTLDNAFGI----KNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTGGGGTGGTGGGGAACACTGGACAATGCTTTTGGCATTAAAAACGCTCCAGGTGTTGGAGCTATTCTCAGCTTACCACAAGCACTCTCAAATACACAAATTGA
TGACCTTCGAGAACTTTATCGAGAAGGAGCTGCGACTGTTATGAACTCCATGGTGAACAACAGGTTCGAAGAAGGACTTATCGAACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTGGGGTGGTGGGGAACACTGGACAATGCTTTTGGCATTAAAAACGCTCCAGGTGTTGGAGCTATTCTCAGCTTACCACAAGCACTCTCAAATACACAAATTGA
TGACCTTCGAGAACTTTATCGAGAAGGAGCTGCGACTGTTATGAACTCCATGGTGAACAACAGGTTCGAAGAAGGACTTATCGAACGGTGA
Protein sequenceShow/hide protein sequence
MGVGWWGTLDNAFGIKNAPGVGAILSLPQALSNTQIDDLRELYREGAATVMNSMVNNRFEEGLIER