; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028829 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028829
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:31540732..31543122
RNA-Seq ExpressionLag0028829
SyntenyLag0028829
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.9e-3246.1Show/hide
Query:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD
        R+L+ GPW FD+ L+I++ P+   KP D  F +V  W+HF+DL L   N+ M  RLGNAIG FED++        G+ LRVRV  D+ +PL RG+K+ LD
Subjt:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD

Query:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF
           GG WI  QYERL DF + CG + H+ KD      +D S   ++ YG WLRF
Subjt:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.9e-3952.53Show/hide
Query:  MRRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKII
        M RV+K GPW FDK L++L+ P      S+  F+ V FWIH +DLP+ W N+ M  RLGNAIG F D+D        GASLR+RV +DIT+PLRRG+KI 
Subjt:  MRRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKII

Query:  LDDSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVY--SIDRSPCVSMNYGEWLRF
        +D   GG WI  QYERL DFC+FCG+IGH   D    Y  + D S   S  YG WLRF
Subjt:  LDDSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVY--SIDRSPCVSMNYGEWLRF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-2841.56Show/hide
Query:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD
        ++ K GPW FD+ L+++  P+  + PS+  F+ +  W+ F+DLPL    ++M  RLGNA+G FE+ D  +     G++LRVRV LDI++PLRRG+K+ LD
Subjt:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD

Query:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF
           GG+WI  QYERL DFC+ CG+     K                 YG WLR+
Subjt:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.7e-3036.91Show/hide
Query:  RRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIIL
        RRVL  GPW FDK LL+L     +++PSD   + V FW+H  +LPL   N+++ E +GNA+G+F D+D  +G    G ++R+RV LD+ +PLRRG+K+ L
Subjt:  RRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIIL

Query:  DDSTGGSWISTQYERLLDFCFFCGIIGHLHKDY-GKVYSIDRSPCVSMNYGEWLRFD---AKGVLMSSLLAGGLVAGLGIPKNQPRSPSVVALMIQFNHS
          S    W+  +YERL  +C+FCG +GH  ++   K+ S D S   S+ YG WLR D   +KG    S  AG +  G+G      +   +     Q N  
Subjt:  DDSTGGSWISTQYERLLDFCFFCGIIGHLHKDY-GKVYSIDRSPCVSMNYGEWLRFD---AKGVLMSSLLAGGLVAGLGIPKNQPRSPSVVALMIQFNHS

Query:  DYGGLRLGPHR----GNRRSSESAPKTDNVSPV
        +   LR  P R     +RR          ++PV
Subjt:  DYGGLRLGPHR----GNRRSSESAPKTDNVSPV

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.0e-2935.19Show/hide
Query:  RRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIIL
        RRVL  GPW FDK LL+L     +++PSD   + V FW+H  +LPL   N+++ + +GNA+G+F D+D  +G    G ++R+RV +D+ +PLRRG+K+ L
Subjt:  RRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIIL

Query:  DDSTGGSWISTQYERLLDFCFFCGIIGHLHKDY-GKVYSIDRSPCVSMNYGEWLRFD---AKGVLMSSLLAGGLVAGLGIPKNQPRSPSVVALMIQFNHS
          S    W+  +YERL  +C+FCG +GH  ++   K+   D +   S+ YG WLR D   +KG    S  AG +  G+G      +   +     Q N  
Subjt:  DDSTGGSWISTQYERLLDFCFFCGIIGHLHKDY-GKVYSIDRSPCVSMNYGEWLRFD---AKGVLMSSLLAGGLVAGLGIPKNQPRSPSVVALMIQFNHS

Query:  DYGGLRLGPHR----GNRRSSESAPKTDNVSPV
        +   LR  P R     +RR         +++PV
Subjt:  DYGGLRLGPHR----GNRRSSESAPKTDNVSPV

TrEMBL top hitse value%identityAlignment
A0A2Z6NZV1 Uncharacterized protein6.3e-2540.13Show/hide
Query:  VLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILDD
        VL+ GPW FD+ LLIL     + +PSD    +V FW+  YDLP    ++ M ++LGN +G FE++D ++  +  G  LR++  LD+ +PL+RG KI   D
Subjt:  VLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILDD

Query:  STGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPC-----VSMNYGEWLR
             W+  +YERL +FCF CG IGH  K+   V  +D +        S  YG WLR
Subjt:  STGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPC-----VSMNYGEWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054812.4e-3246.1Show/hide
Query:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD
        R+L+ GPW FD+ L+I++ P+   KP D  F +V  W+HF+DL L   N+ M  RLGNAIG FED++        G+ LRVRV  D+ +PL RG+K+ LD
Subjt:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD

Query:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF
           GG WI  QYERL DF + CG + H+ KD      +D S   ++ YG WLRF
Subjt:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF

A0A6J1D765 uncharacterized protein LOC1110179025.3e-2438.85Show/hide
Query:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD
        RVL  GPW F+K LL+L  P    +P D +F+   FWI  +++P +  + EM   LG  +G+ E+I+G       G  +RVRV +D+++PLRRG+K+   
Subjt:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD

Query:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMN----YGEWLR
        D     W   +YE+L DFC+ CG IGH  ++  +     RS  V+ N    YG+WLR
Subjt:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMN----YGEWLR

A0A6J1DU55 uncharacterized protein LOC1110231359.1e-4052.53Show/hide
Query:  MRRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKII
        M RV+K GPW FDK L++L+ P      S+  F+ V FWIH +DLP+ W N+ M  RLGNAIG F D+D        GASLR+RV +DIT+PLRRG+KI 
Subjt:  MRRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKII

Query:  LDDSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVY--SIDRSPCVSMNYGEWLRF
        +D   GG WI  QYERL DFC+FCG+IGH   D    Y  + D S   S  YG WLRF
Subjt:  LDDSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVY--SIDRSPCVSMNYGEWLRF

A0A6J1DX30 uncharacterized protein LOC1110248745.5e-2941.56Show/hide
Query:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD
        ++ K GPW FD+ L+++  P+  + PS+  F+ +  W+ F+DLPL    ++M  RLGNA+G FE+ D  +     G++LRVRV LDI++PLRRG+K+ LD
Subjt:  RVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILD

Query:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF
           GG+WI  QYERL DFC+ CG+     K                 YG WLR+
Subjt:  DSTGGSWISTQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGGTTCTGAAACAGGGACCTTGGATCTTTGACAAATTCCTCTTGATTTTAGAGTTCCCTATCTGCGACCTTAAACCCTCAGATTACCATTTTTCCTCAGTCGT
CTTTTGGATTCATTTCTATGATCTTCCTCTAGATTGGTATAATCAAGAGATGACGGAGCGCCTTGGGAACGCGATTGGTGAGTTTGAAGACATTGACGGTCGTAACGGTT
TTCATCATTTGGGAGCTAGCTTGCGAGTCCGTGTTCACTTAGATATCACTCAGCCTCTTCGACGAGGAGTGAAAATTATCCTTGATGATTCAACGGGAGGTAGCTGGATT
TCGACCCAATATGAAAGATTACTTGACTTTTGCTTCTTCTGTGGGATCATTGGCCATCTACACAAGGACTATGGGAAGGTGTACTCAATTGATCGATCGCCATGTGTATC
GATGAATTATGGGGAATGGTTGCGGTTCGATGCTAAGGGAGTTCTGATGTCAAGTCTTCTGGCAGGGGGTTTGGTTGCGGGGCTTGGTATTCCTAAAAACCAACCTCGTA
GTCCTTCAGTGGTGGCGTTAATGATACAATTCAACCACTCGGATTATGGGGGTCTGAGGCTCGGTCCTCATCGTGGCAATAGGAGATCATCGGAATCCGCTCCGAAGACT
GACAACGTTTCTCCAGTGAAGCTCGTGAAGTCGGGAGTTTCGTGGAAGGTGGTGGTTACGACTGGAGGAATTAATGAGATTGATAGCTATCTGTTTTGCTCCAAATATAG
CACGGGTGAAGATGCGTTTTCGGCCGCAGTTACGGCTGCACAATTCGGAAGCGTTGACGTGGAGGGGCTGAAACCGAATGGAGTTGATCGAATTCTTGCTGAGGGTAACA
TGACTATGAGCCAAGATCAAAATCATGCTAAGAACCATGGGAATTTGGCCCATCCGGTTGAGTTATTAAGTAGTGAGCTTAGTGGAGATGAGGCTAGTTCTTGCTCGAAG
AAGGATGGGAAGAAACCATGTCAAGGGGAGACTTTGGATGATTGTGGATTAAGGGACTTGGAGTTCTATGATTATGCTGTTGAGCGACTGGAGGGAGCAAATTCTGTGCT
GCAGCAAAACTGGGAGCAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAATAATTTTCGTGATAAAGGAGCAAGGAGAGCCCTACACT
AG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGGGTTCTGAAACAGGGACCTTGGATCTTTGACAAATTCCTCTTGATTTTAGAGTTCCCTATCTGCGACCTTAAACCCTCAGATTACCATTTTTCCTCAGTCGT
CTTTTGGATTCATTTCTATGATCTTCCTCTAGATTGGTATAATCAAGAGATGACGGAGCGCCTTGGGAACGCGATTGGTGAGTTTGAAGACATTGACGGTCGTAACGGTT
TTCATCATTTGGGAGCTAGCTTGCGAGTCCGTGTTCACTTAGATATCACTCAGCCTCTTCGACGAGGAGTGAAAATTATCCTTGATGATTCAACGGGAGGTAGCTGGATT
TCGACCCAATATGAAAGATTACTTGACTTTTGCTTCTTCTGTGGGATCATTGGCCATCTACACAAGGACTATGGGAAGGTGTACTCAATTGATCGATCGCCATGTGTATC
GATGAATTATGGGGAATGGTTGCGGTTCGATGCTAAGGGAGTTCTGATGTCAAGTCTTCTGGCAGGGGGTTTGGTTGCGGGGCTTGGTATTCCTAAAAACCAACCTCGTA
GTCCTTCAGTGGTGGCGTTAATGATACAATTCAACCACTCGGATTATGGGGGTCTGAGGCTCGGTCCTCATCGTGGCAATAGGAGATCATCGGAATCCGCTCCGAAGACT
GACAACGTTTCTCCAGTGAAGCTCGTGAAGTCGGGAGTTTCGTGGAAGGTGGTGGTTACGACTGGAGGAATTAATGAGATTGATAGCTATCTGTTTTGCTCCAAATATAG
CACGGGTGAAGATGCGTTTTCGGCCGCAGTTACGGCTGCACAATTCGGAAGCGTTGACGTGGAGGGGCTGAAACCGAATGGAGTTGATCGAATTCTTGCTGAGGGTAACA
TGACTATGAGCCAAGATCAAAATCATGCTAAGAACCATGGGAATTTGGCCCATCCGGTTGAGTTATTAAGTAGTGAGCTTAGTGGAGATGAGGCTAGTTCTTGCTCGAAG
AAGGATGGGAAGAAACCATGTCAAGGGGAGACTTTGGATGATTGTGGATTAAGGGACTTGGAGTTCTATGATTATGCTGTTGAGCGACTGGAGGGAGCAAATTCTGTGCT
GCAGCAAAACTGGGAGCAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAATAATTTTCGTGATAAAGGAGCAAGGAGAGCCCTACACT
AG
Protein sequenceShow/hide protein sequence
MRRVLKQGPWIFDKFLLILEFPICDLKPSDYHFSSVVFWIHFYDLPLDWYNQEMTERLGNAIGEFEDIDGRNGFHHLGASLRVRVHLDITQPLRRGVKIILDDSTGGSWI
STQYERLLDFCFFCGIIGHLHKDYGKVYSIDRSPCVSMNYGEWLRFDAKGVLMSSLLAGGLVAGLGIPKNQPRSPSVVALMIQFNHSDYGGLRLGPHRGNRRSSESAPKT
DNVSPVKLVKSGVSWKVVVTTGGINEIDSYLFCSKYSTGEDAFSAAVTAAQFGSVDVEGLKPNGVDRILAEGNMTMSQDQNHAKNHGNLAHPVELLSSELSGDEASSCSK
KDGKKPCQGETLDDCGLRDLEFYDYAVERLEGANSVLQQNWEQKLPHHSSLANFMNRLLLNNFRDKGARRALH