; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028867 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028867
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationchr8:32096330..32096776
RNA-Seq ExpressionLag0028867
SyntenyLag0028867
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601820.1 hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sororia]7.1e-6988.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+RRSPRR A P+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6988.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+RRSPRRRA P+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_022963063.1 uncharacterized protein LOC111463373 [Cucurbita moschata]1.3e-6786.75Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+RRSPRRRA P+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G   WHPGSPRPGWTGFR+KYLLRKTWRP+LA IPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]4.6e-6887.42Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+RRSPRRRA P+KKRDDHK+LSRSNTLKDLFVSSPPYD ++ EIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_038875200.1 uncharacterized protein LOC120067717 [Benincasa hispida]2.7e-6888.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS RRSP RRA PEKKRDDHKELSRSNTLKDLFVSSPPY  TDG+I++   AAP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        R+ T VCKEKEDGEVGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein7.4e-6484.31Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS RRSPRRR+ PE K RDD K LSRSNTLKDLFVSSPPY GTD +++     AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAP

Query:  IRNVTPVC-KEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
         RNVTPVC KEKE+G VGSPGW+PGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  IRNVTPVC-KEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A5D3BMD8 Uncharacterized protein2.4e-6283.87Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRR-RAFPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---A
        MASLLKFKLLPTH CGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS RRSPRR RA PE KKRDDHK LSRSNTLKDLFVSSPPY GTD ++++    
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRR-RAFPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---A

Query:  APIRNVTPVC-KEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        AP +N TPVC KEKE+G VGSPGW+PGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  APIRNVTPVC-KEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1DFV6 uncharacterized protein LOC1110200643.9e-6584.87Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINDAAPIR--
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS RRSPRRRA P+KKR DH +L+RSNTLKDLFVSSPPYDG DGEI +AA     
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINDAAPIR--

Query:  --NVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
          N+ PVCKEKEDGEVGS GW PGSPRP WTGFRYKYLLRKTWRPVLAGIPE
Subjt:  --NVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1HGM7 uncharacterized protein LOC1114633736.4e-6886.75Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+RRSPRRRA P+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G   WHPGSPRPGWTGFR+KYLLRKTWRP+LA IPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1I9M9 uncharacterized protein LOC1114704933.5e-6686.09Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRNS+    RRRA P+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEIN+   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEIND---AAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E EDGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown2.5e-1642.59Show/hide
Query:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSR-RSP--RRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDG---------
        SL KFKLL THC  VA+SPT     SP+IHLRRRK TLR+LLTR+S R R P  +      KK D   ++  S  L DLFVSSPP++ + G         
Subjt:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSR-RSP--RRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDG---------

Query:  ---EINDAAPIRNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
           E+    P+  V+      E+      G++ GS RP  +      LLR++WRPVL  IPE
Subjt:  ---EINDAAPIRNVTPVCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

AT1G68430.1 unknown protein2.0e-1341.25Show/hide
Query:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINDAAPI
        MA+L +FK L T CGV AQSPT   SPRTSPL+ LRR+KTTL+MLL    S  SP RR         HK+++    LKDLFVSS   +    E       
Subjt:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINDAAPI

Query:  RNVTPVCKEKEDGEVGSPGWHPGSPR---------PGWTGFRYKYLLRKTWRPVLAGIPE
         +  P  K KE+           + R         P W GF  K LL++ WRP L  I E
Subjt:  RNVTPVCKEKEDGEVGSPGWHPGSPR---------PGWTGFRYKYLLRKTWRPVLAGIPE

AT5G16200.1 50S ribosomal protein-related1.6e-1038.15Show/hide
Query:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNS-SRRSPRRRAFPE----------KKRDDHKELSRSNTLKDLFVS--SPP
        ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S SRR   R+   E          KKR +H+   R   L++L V+  SPP
Subjt:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNS-SRRSPRRRAFPE----------KKRDDHKELSRSNTLKDLFVS--SPP

Query:  Y------DGTDGEINDAAPIRNVTP--VCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        Y      DG   E ++ +P+ NVT     +E      GS G            FR + +LRK WRPVL  IPE
Subjt:  Y------DGTDGEINDAAPIRNVTP--VCKEKEDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCGACCTTGAGCCCTAGGACCAGTCCTCTCATTCATCTCCGCCGCCGGAAAAC
CACCTTGCGGATGCTCCTCACTCGGAATTCCAGCCGCCGCTCCCCTCGCCGCCGTGCCTTCCCGGAGAAGAAGAGAGACGATCACAAGGAATTGTCGCGGAGCAACACGT
TGAAGGATCTCTTCGTGTCGTCGCCGCCGTACGATGGAACCGACGGCGAGATTAACGACGCAGCTCCGATCCGAAACGTGACTCCGGTTTGTAAGGAGAAGGAGGATGGT
GAGGTTGGATCGCCCGGTTGGCATCCCGGTTCACCTAGACCGGGATGGACCGGTTTCCGATACAAATACTTGCTACGGAAAACCTGGCGGCCGGTGCTCGCCGGAATCCC
TGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCGACCTTGAGCCCTAGGACCAGTCCTCTCATTCATCTCCGCCGCCGGAAAAC
CACCTTGCGGATGCTCCTCACTCGGAATTCCAGCCGCCGCTCCCCTCGCCGCCGTGCCTTCCCGGAGAAGAAGAGAGACGATCACAAGGAATTGTCGCGGAGCAACACGT
TGAAGGATCTCTTCGTGTCGTCGCCGCCGTACGATGGAACCGACGGCGAGATTAACGACGCAGCTCCGATCCGAAACGTGACTCCGGTTTGTAAGGAGAAGGAGGATGGT
GAGGTTGGATCGCCCGGTTGGCATCCCGGTTCACCTAGACCGGGATGGACCGGTTTCCGATACAAATACTTGCTACGGAAAACCTGGCGGCCGGTGCTCGCCGGAATCCC
TGAGTAA
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHCGVAQSPTLSPRTSPLIHLRRRKTTLRMLLTRNSSRRSPRRRAFPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINDAAPIRNVTPVCKEKEDG
EVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE