; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028875 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028875
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:32240878..32242664
RNA-Seq ExpressionLag0028875
SyntenyLag0028875
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48431.1 hypothetical protein EZV62_027725 [Acer yangbiense]1.8e-2633.49Show/hide
Query:  KELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNL
        K+L      KILS  S+N E F S++ RIW  +G V+IE +  N++   F+   D+ R+  GGPWSFD A+++ ++ +G  +I+SL F  V FWVH  N+
Subjt:  KELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNL

Query:  P---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEE-
        P                                        V+V +PL+R   V     GE   +PI YE+LP FC+ CG +GH+  EC   G D   E 
Subjt:  P---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEE-

Query:  --LCYGKEMRET
          + YG  +R T
Subjt:  --LCYGKEMRET

TXG48918.1 hypothetical protein EZV62_024793 [Acer yangbiense]8.4e-2431.86Show/hide
Query:  EDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVH
        +D  K L      KILS + VN + FI M+P+IW  +  VK E V +N+F   F+   D+ ++++GGPW FD A+L+  +  G   I  ++F  V+FW+ 
Subjt:  EDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVH

Query:  FLNLPRVDVREPLK----------RGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQEC--REAGADDSE-ELCYGKEMRETQGSKGVYKNPRMH
          N+P + +   +           R  +V     G+   + + YEKLP+ CY CGRLGHV + C  +  G +  +  L +G  M+    +K    + R  
Subjt:  FLNLPRVDVREPLK----------RGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQEC--REAGADDSE-ELCYGKEMRETQGSKGVYKNPRMH

Query:  LNYQSFRGRGRGRSFSFGREDQSKTW
             + G G G S S G+ +  KTW
Subjt:  LNYQSFRGRGRGRSFSFGREDQSKTW

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]5.4e-2329.28Show/hide
Query:  EKEAILSQLEKLKIEEKN-RIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSF
        E + I  + EKL +++ N  I  ++    E   + L  +   K ++ + +N E F S +  IW  +  V +E +G N+F+ +F+   D+ RI+ GGPW F
Subjt:  EKEAILSQLEKLKIEEKN-RIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSF

Query:  DNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPI
        D  +L+ ++  G+  +  L FRYV FW+   NLP                                        +DV  PLKRG  V  G   +   + I
Subjt:  DNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPI

Query:  TYEKLPDFCYFCGRLGHVFQEC
         YE+LP+FCY+CG++GH+ ++C
Subjt:  TYEKLPDFCYFCGRLGHVFQEC

TXG57016.1 hypothetical protein EZV62_018329 [Acer yangbiense]1.1e-2333.03Show/hide
Query:  LKIEEKNRIVVVEDEDIEDTNKE-LLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLK
        L I+EK R V+  +  ++D  ++ L F    K+LS + VN+  FI +M +IW  EG V+I+++  N F+  FK L+ + R++ GGPWSFD  I++F+   
Subjt:  LKIEEKNRIVVVEDEDIEDTNKE-LLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLK

Query:  GNYSID----SLNFRYVSFWVHFLNLPRVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCYGKEMRETQGSK
        GN   +     L      F         V V EPL++   V    +G+   + + YE+L DFC+ C RLGHV  EC +  A  +      +++    G+K
Subjt:  GNYSID----SLNFRYVSFWVHFLNLPRVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCYGKEMRETQGSK

Query:  GVYKNPRMHLNYQSFRGR
          Y + R   NY ++R R
Subjt:  GVYKNPRMHLNYQSFRGR

XP_015382410.1 uncharacterized protein LOC107175497 [Citrus sinensis]2.4e-2333.33Show/hide
Query:  AATC---KILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP-
        AA C   KI+ +R VN E   S M +IW     V+IE +G N+F  KF    DK R++ GGPW FD A+++  + KG   I + +F +  FWVH  N+P 
Subjt:  AATC---KILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP-

Query:  --------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCY
                                               VD+ +PL++   V T  +     IPI YE+LPDFC+ CG +GH ++EC E      ++L Y
Subjt:  --------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCY

Query:  GKEMRET
        G  M+ T
Subjt:  GKEMRET

TrEMBL top hitse value%identityAlignment
A0A314YVX1 CCHC-type domain-containing protein3.4e-2327.87Show/hide
Query:  EAILSQLEKLKI--EEKNRIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFD
        E +++ LEK  I  E++N  + VE  DI+D  + L  +   K+ +    N E F   M +IW     V ++ +G+N+F   F    D+++++R GPW+FD
Subjt:  EAILSQLEKLKI--EEKNRIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFD

Query:  NAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLPR---------------------------------------VDVREPLKRGTNVRTGAKGETKWIPIT
         A+++ +   G  +   ++ +Y  FW+   N+P                                        +DV +PL RG  + T   G T+++   
Subjt:  NAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLPR---------------------------------------VDVREPLKRGTNVRTGAKGETKWIPIT

Query:  YEKLPDFCYFCGRLGHVFQECR--EAGADDSEELCYGKEMRETQ
        YE+LP+FC+ CGR+GHVF+EC   +  A  + E  YG  ++ T+
Subjt:  YEKLPDFCYFCGRLGHVFQECR--EAGADDSEELCYGKEMRETQ

A0A5C7GUN1 Uncharacterized protein8.7e-2733.49Show/hide
Query:  KELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNL
        K+L      KILS  S+N E F S++ RIW  +G V+IE +  N++   F+   D+ R+  GGPWSFD A+++ ++ +G  +I+SL F  V FWVH  N+
Subjt:  KELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNL

Query:  P---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEE-
        P                                        V+V +PL+R   V     GE   +PI YE+LP FC+ CG +GH+  EC   G D   E 
Subjt:  P---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEE-

Query:  --LCYGKEMRET
          + YG  +R T
Subjt:  --LCYGKEMRET

A0A5C7GW15 CCHC-type domain-containing protein4.1e-2431.86Show/hide
Query:  EDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVH
        +D  K L      KILS + VN + FI M+P+IW  +  VK E V +N+F   F+   D+ ++++GGPW FD A+L+  +  G   I  ++F  V+FW+ 
Subjt:  EDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVH

Query:  FLNLPRVDVREPLK----------RGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQEC--REAGADDSE-ELCYGKEMRETQGSKGVYKNPRMH
          N+P + +   +           R  +V     G+   + + YEKLP+ CY CGRLGHV + C  +  G +  +  L +G  M+    +K    + R  
Subjt:  FLNLPRVDVREPLK----------RGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQEC--REAGADDSE-ELCYGKEMRETQGSKGVYKNPRMH

Query:  LNYQSFRGRGRGRSFSFGREDQSKTW
             + G G G S S G+ +  KTW
Subjt:  LNYQSFRGRGRGRSFSFGREDQSKTW

A0A5C7H9Y2 CCHC-type domain-containing protein2.6e-2329.28Show/hide
Query:  EKEAILSQLEKLKIEEKN-RIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSF
        E + I  + EKL +++ N  I  ++    E   + L  +   K ++ + +N E F S +  IW  +  V +E +G N+F+ +F+   D+ RI+ GGPW F
Subjt:  EKEAILSQLEKLKIEEKN-RIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSF

Query:  DNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPI
        D  +L+ ++  G+  +  L FRYV FW+   NLP                                        +DV  PLKRG  V  G   +   + I
Subjt:  DNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP---------------------------------------RVDVREPLKRGTNVRTGAKGETKWIPI

Query:  TYEKLPDFCYFCGRLGHVFQEC
         YE+LP+FCY+CG++GH+ ++C
Subjt:  TYEKLPDFCYFCGRLGHVFQEC

A0A5C7HL93 Uncharacterized protein5.3e-2433.03Show/hide
Query:  LKIEEKNRIVVVEDEDIEDTNKE-LLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLK
        L I+EK R V+  +  ++D  ++ L F    K+LS + VN+  FI +M +IW  EG V+I+++  N F+  FK L+ + R++ GGPWSFD  I++F+   
Subjt:  LKIEEKNRIVVVEDEDIEDTNKE-LLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSFDNAILIFKDLK

Query:  GNYSID----SLNFRYVSFWVHFLNLPRVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCYGKEMRETQGSK
        GN   +     L      F         V V EPL++   V    +G+   + + YE+L DFC+ C RLGHV  EC +  A  +      +++    G+K
Subjt:  GNYSID----SLNFRYVSFWVHFLNLPRVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCYGKEMRETQGSK

Query:  GVYKNPRMHLNYQSFRGR
          Y + R   NY ++R R
Subjt:  GVYKNPRMHLNYQSFRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding4.0e-0827.01Show/hide
Query:  ERVGKNVFQCKFKFL----RDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP------RVDVREPLKRGTNVRTGAKGETKWIPI
        E VG+ +   K +FL         I+R GPWSF++ + + +     +S     F+ + FW+    +P      R+      + G  + T    +   +  
Subjt:  ERVGKNVFQCKFKFL----RDKIRIIRGGPWSFDNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLP------RVDVREPLKRGTNVRTGAKGETKWIPI

Query:  TYEKLPDFCYFCGRLGHVFQECREAG-----ADDSEE
         YEKL +FC  CG L H   EC  +G     ADD ++
Subjt:  TYEKLPDFCYFCGRLGHVFQECREAG-----ADDSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGAATTGTAGACTGTGAACGTGAGAAGGAGAAAGAAGCTATTCTTAGCCAACTCGAAAAGTTAAAGATTGAGGAGAAAAATAGAATAGTAGTTGTGGAAGATGA
AGACATTGAAGACACAAATAAAGAATTGTTATTCGCAGCAACGTGTAAAATATTATCGGAGAGGAGTGTCAACGAGGAATACTTCATCTCAATGATGCCGCGGATATGGG
GCAGAGAAGGCTATGTCAAGATAGAGAGGGTGGGGAAGAATGTTTTCCAGTGCAAGTTCAAATTTCTAAGAGACAAGATCAGAATAATCAGAGGAGGACCATGGAGTTTT
GATAATGCAATCCTTATATTCAAAGATTTAAAAGGGAACTATAGTATAGACTCTTTAAATTTTAGATATGTTTCATTTTGGGTTCATTTTCTAAATTTACCAAGAGTGGA
CGTGCGAGAACCTCTGAAGAGGGGAACAAATGTTAGAACAGGCGCAAAAGGAGAGACAAAATGGATACCGATTACCTACGAAAAATTGCCAGACTTCTGTTATTTCTGTG
GAAGACTCGGGCATGTGTTCCAAGAGTGTAGGGAGGCTGGAGCAGATGACAGCGAGGAGTTGTGCTATGGAAAAGAGATGAGAGAAACACAAGGTAGCAAAGGAGTCTAC
AAAAATCCGAGAATGCATTTGAACTATCAAAGCTTTAGAGGAAGAGGTAGGGGAAGATCCTTCAGCTTCGGAAGAGAAGACCAAAGTAAAACATGGAGACCGGAAGCTAG
AAGGGATACTAAGGAAGTTTCAAAGGAAATATCACCGGATCTCGAAGATAACCAAACAAAAGGAAAAGCCACCAGAAAATCCGAGAGGGAAGAGGCTGAAACAAGAGCAA
CTCCAACCGGAGAATCGCCGGAGGAAGTCAGCTTGCCGGCAGCAACTCAGGCGGCAGTACAGAAGGTGCAACCAAAGAAAATAGAGCCATTACAATCCGAAAAAATGGTG
CAAAGTCATAAAGGCAACTCTGACGTCAAGGAAAAAGGAAGACAGATGGATAATGATGAAAATAGTGACCTAGAAGGCAAGTGGGAAACGACAGAGATGAAAGAGAAATG
CAACCAAAAAAGTAACACCAAGGACAACCGTTTAAACCTCAAGACAGAAGATGGAATTGGGCCCACACGTGATAAGCTAGCCAAAAGCCTAGTGGAGGGGGAAAAAAACA
AGATAGGGGTGGGTGAAATGCACTTAGACTGGCAGACGGTTGAGAGAAGGGTTAAAGGGTGGAAAAGAAGAGCTAGAACAGAAGGACCTATTAGTGAAATTATTGAGATG
GCAGGCCAGTCACAAATAAAAGACCAGCGCAGCAGGAGGAAGACGAAGGAAAAAGCAAAAAGAGATTGTGCAACCAATACTTCGACAACGTATGAGGGATATCGGCGGAG
GCTGTGGATCAGCCCCGCCGGACGCCATGAAAATCCTCTGCTGGAACGTTCGGGGGTTGGGGAATTCTCGAGCATTCTGAGCTTTGCGCCACGAGGTGCAAAGTCACAAG
CCCCACATCCTTTTCATTTCAGAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGAATTGTAGACTGTGAACGTGAGAAGGAGAAAGAAGCTATTCTTAGCCAACTCGAAAAGTTAAAGATTGAGGAGAAAAATAGAATAGTAGTTGTGGAAGATGA
AGACATTGAAGACACAAATAAAGAATTGTTATTCGCAGCAACGTGTAAAATATTATCGGAGAGGAGTGTCAACGAGGAATACTTCATCTCAATGATGCCGCGGATATGGG
GCAGAGAAGGCTATGTCAAGATAGAGAGGGTGGGGAAGAATGTTTTCCAGTGCAAGTTCAAATTTCTAAGAGACAAGATCAGAATAATCAGAGGAGGACCATGGAGTTTT
GATAATGCAATCCTTATATTCAAAGATTTAAAAGGGAACTATAGTATAGACTCTTTAAATTTTAGATATGTTTCATTTTGGGTTCATTTTCTAAATTTACCAAGAGTGGA
CGTGCGAGAACCTCTGAAGAGGGGAACAAATGTTAGAACAGGCGCAAAAGGAGAGACAAAATGGATACCGATTACCTACGAAAAATTGCCAGACTTCTGTTATTTCTGTG
GAAGACTCGGGCATGTGTTCCAAGAGTGTAGGGAGGCTGGAGCAGATGACAGCGAGGAGTTGTGCTATGGAAAAGAGATGAGAGAAACACAAGGTAGCAAAGGAGTCTAC
AAAAATCCGAGAATGCATTTGAACTATCAAAGCTTTAGAGGAAGAGGTAGGGGAAGATCCTTCAGCTTCGGAAGAGAAGACCAAAGTAAAACATGGAGACCGGAAGCTAG
AAGGGATACTAAGGAAGTTTCAAAGGAAATATCACCGGATCTCGAAGATAACCAAACAAAAGGAAAAGCCACCAGAAAATCCGAGAGGGAAGAGGCTGAAACAAGAGCAA
CTCCAACCGGAGAATCGCCGGAGGAAGTCAGCTTGCCGGCAGCAACTCAGGCGGCAGTACAGAAGGTGCAACCAAAGAAAATAGAGCCATTACAATCCGAAAAAATGGTG
CAAAGTCATAAAGGCAACTCTGACGTCAAGGAAAAAGGAAGACAGATGGATAATGATGAAAATAGTGACCTAGAAGGCAAGTGGGAAACGACAGAGATGAAAGAGAAATG
CAACCAAAAAAGTAACACCAAGGACAACCGTTTAAACCTCAAGACAGAAGATGGAATTGGGCCCACACGTGATAAGCTAGCCAAAAGCCTAGTGGAGGGGGAAAAAAACA
AGATAGGGGTGGGTGAAATGCACTTAGACTGGCAGACGGTTGAGAGAAGGGTTAAAGGGTGGAAAAGAAGAGCTAGAACAGAAGGACCTATTAGTGAAATTATTGAGATG
GCAGGCCAGTCACAAATAAAAGACCAGCGCAGCAGGAGGAAGACGAAGGAAAAAGCAAAAAGAGATTGTGCAACCAATACTTCGACAACGTATGAGGGATATCGGCGGAG
GCTGTGGATCAGCCCCGCCGGACGCCATGAAAATCCTCTGCTGGAACGTTCGGGGGTTGGGGAATTCTCGAGCATTCTGAGCTTTGCGCCACGAGGTGCAAAGTCACAAG
CCCCACATCCTTTTCATTTCAGAGACTAA
Protein sequenceShow/hide protein sequence
MTRIVDCEREKEKEAILSQLEKLKIEEKNRIVVVEDEDIEDTNKELLFAATCKILSERSVNEEYFISMMPRIWGREGYVKIERVGKNVFQCKFKFLRDKIRIIRGGPWSF
DNAILIFKDLKGNYSIDSLNFRYVSFWVHFLNLPRVDVREPLKRGTNVRTGAKGETKWIPITYEKLPDFCYFCGRLGHVFQECREAGADDSEELCYGKEMRETQGSKGVY
KNPRMHLNYQSFRGRGRGRSFSFGREDQSKTWRPEARRDTKEVSKEISPDLEDNQTKGKATRKSEREEAETRATPTGESPEEVSLPAATQAAVQKVQPKKIEPLQSEKMV
QSHKGNSDVKEKGRQMDNDENSDLEGKWETTEMKEKCNQKSNTKDNRLNLKTEDGIGPTRDKLAKSLVEGEKNKIGVGEMHLDWQTVERRVKGWKRRARTEGPISEIIEM
AGQSQIKDQRSRRKTKEKAKRDCATNTSTTYEGYRRRLWISPAGRHENPLLERSGVGEFSSILSFAPRGAKSQAPHPFHFRD