; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028886 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028886
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase
Genome locationchr8:32310190..32310788
RNA-Seq ExpressionLag0028886
SyntenyLag0028886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018635152.1 ubiquitin carboxyl-terminal hydrolase [Toxoplasma gondii ME49]6.4e-0544.94Show/hide
Query:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPS
        SPSQS     S++PSPS       SPSPSS A    SPSPSS      SPSP+S      SPSP+S       P  S     CSS S S
Subjt:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPS

XP_021372296.1 uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like isoform X1 [Mizuhopecten yessoensis]6.4e-0537.8Show/hide
Query:  SQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQIS
        S S  VV ++  SPSL V     PS SS      S SPSS V+     SP+S V+    PSP+S V+     SPSL V+  S  S S  V+         
Subjt:  SQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQIS

Query:  KVVHSIAHSPSSKVRRSGSPSLSSKVL
         +V +  HSPSS V  +   S SS V+
Subjt:  KVVHSIAHSPSSKVRRSGSPSLSSKVL

XP_021372297.1 uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like isoform X2 [Mizuhopecten yessoensis]6.4e-0537.8Show/hide
Query:  SQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQIS
        S S  VV ++  SPSL V     PS SS      S SPSS V+     SP+S V+    PSP+S V+     SPSL V+  S  S S  V+         
Subjt:  SQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQIS

Query:  KVVHSIAHSPSSKVRRSGSPSLSSKVL
         +V +  HSPSS V  +   S SS V+
Subjt:  KVVHSIAHSPSSKVRRSGSPSLSSKVL

XP_028516743.1 chromatin-remodeling ATPase INO80 isoform X2 [Exaiptasia diaphana]6.4e-0537.88Show/hide
Query:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ
        SPS S     S  PSPS      GSPSPS      G PSPS      GSPSP+ +    G PSP+ +    G PSPS         SPS           
Subjt:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ

Query:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVLRRG
          K   S   SPS +   SGSPS S K    G
Subjt:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVLRRG

XP_036842842.1 ligand-dependent nuclear receptor-interacting factor 1 [Oncorhynchus mykiss]2.0e-0634.72Show/hide
Query:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ
        SPS  LK+   A+PSP LK++   SPSP  K     SPSP  K+    SPSP  K+    SPSP  K+     PSP LK+   +S SP L          
Subjt:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ

Query:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVLRRGSFL-KFEGPSLS
          K+    + SP  K++   SPS    +L    ++  +E P+++
Subjt:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVLRRGSFL-KFEGPSLS

TrEMBL top hitse value%identityAlignment
A0A1E1XEQ0 Putative host cell transcription factor hcfc1 (Fragment)6.9e-0530.34Show/hide
Query:  GSPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSP
        G+P      +    P P     H G+P P +    CG+P P +  + CG+P P +  + CG+P P +  + CG P P    +RC +  P
Subjt:  GSPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSP

A0A674EW11 Uncharacterized protein1.5e-0744.19Show/hide
Query:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ
        SPS S  V+   +PSPS  V +  SPSPS+      SPSPS+ VL   SPSP++ VL   SPSP++ VL    PSPS  VL   S SPS  VL  +    
Subjt:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKVFLIQ

Query:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVL
         + V++ ++ SPS+ V    SPS S+ VL
Subjt:  ISKVVHSIAHSPSSKVRRSGSPSLSSKVL

A0A6C0LW85 HP domain-containing protein (Fragment)2.0e-0435.87Show/hide
Query:  GSPSQSLKVVLSAAPSPSL-KVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSL
        G+PS S+ + ++ APSPSL  + +  +PSPS +     +PSPS       +PSP+ +    G+PSP+        PSPS+     S+ SPS+
Subjt:  GSPSQSLKVVLSAAPSPSL-KVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSL

A0A6J8BTE3 Uncharacterized protein6.9e-0535.11Show/hide
Query:  RGSPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKV--LCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKV
        R SPS  ++ V +A+PSP+++ +   SPSP  +     SPSPS K+  +   SPSP  K +   SPSP  +++    PSP ++ L  +S SP +  L + 
Subjt:  RGSPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKV--LCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPSLWVLRKV

Query:  FLIQISKVVHSIAHSPSSKV----RRSGSPS
              K       SPS K+    R S SPS
Subjt:  FLIQISKVVHSIAHSPSSKV----RRSGSPS

S8G1F0 Ubiquitin carboxyl-terminal hydrolase3.1e-0544.94Show/hide
Query:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPS
        SPSQS     S++PSPS       SPSPSS A    SPSPSS      SPSP+S      SPSP+S       P  S     CSS S S
Subjt:  SPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSHSPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCTATTGCTGCTCCGTTGAGGTTCTCCTTCTTCAAGATCGAAGGTGGTTCTTTCCGCCGAGGTTCTCCTTCTCAAAGTTTGAAGGTGGTTCTCTCTGCTGC
TCCTTCACCAAGTTTGAAAGTACGCCACTATGGTTCTCCTTCTCCAAGTTCAAAAGCTCACTGCTGTGGTTCGCCTTCTCCAAGTTCGAAGGTTCTTTGTTGTGGTTCCC
CTTCTCCAAATTCGAAGGTTCTCCGTTGTGGTTCCCCTTCTCCAAATTCGAAGGTTCTCCGTTGTGGTTATCCTTCTCCAAGTTTGAAGGTTCTCCGCTGCAGTTCTCAT
TCTCCAAGTTTGTGGGTTCTTCGCAAGGTTTTCCTTATTCAAATTTCGAAGGTGGTTCATTCTATTGCTCATTCTCCAAGTTCAAAGGTTCGTCGTAGTGGTTCTCCTTC
TCTAAGTTCAAAGGTTCTTCGTCGCGGTTCCTTCCTCAAGTTCGAAGGTCCTTCACTGTCGTCGTTCCTTCTTCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCTCTATTGCTGCTCCGTTGAGGTTCTCCTTCTTCAAGATCGAAGGTGGTTCTTTCCGCCGAGGTTCTCCTTCTCAAAGTTTGAAGGTGGTTCTCTCTGCTGC
TCCTTCACCAAGTTTGAAAGTACGCCACTATGGTTCTCCTTCTCCAAGTTCAAAAGCTCACTGCTGTGGTTCGCCTTCTCCAAGTTCGAAGGTTCTTTGTTGTGGTTCCC
CTTCTCCAAATTCGAAGGTTCTCCGTTGTGGTTCCCCTTCTCCAAATTCGAAGGTTCTCCGTTGTGGTTATCCTTCTCCAAGTTTGAAGGTTCTCCGCTGCAGTTCTCAT
TCTCCAAGTTTGTGGGTTCTTCGCAAGGTTTTCCTTATTCAAATTTCGAAGGTGGTTCATTCTATTGCTCATTCTCCAAGTTCAAAGGTTCGTCGTAGTGGTTCTCCTTC
TCTAAGTTCAAAGGTTCTTCGTCGCGGTTCCTTCCTCAAGTTCGAAGGTCCTTCACTGTCGTCGTTCCTTCTTCAAGTTTGA
Protein sequenceShow/hide protein sequence
MVLSIAAPLRFSFFKIEGGSFRRGSPSQSLKVVLSAAPSPSLKVRHYGSPSPSSKAHCCGSPSPSSKVLCCGSPSPNSKVLRCGSPSPNSKVLRCGYPSPSLKVLRCSSH
SPSLWVLRKVFLIQISKVVHSIAHSPSSKVRRSGSPSLSSKVLRRGSFLKFEGPSLSSFLLQV