; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028898 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028898
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationchr8:32532222..32533259
RNA-Seq ExpressionLag0028898
SyntenyLag0028898
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA98898.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]2.8e-3629.08Show/hide
Query:  WRVGNGKH---IKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLG
        WR+    H   IKI  DPW+      +PI  K      +V+ L+D NG W+ ++I + F   D E I  I L    ++D I W PD  G FS++SAY+L 
Subjt:  WRVGNGKH---IKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLG

Query:  QSIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLP--KVSFLLD
          + + G +SSS  +++K  W   WK     +  + +WRAI N LPT+ N   R  + + +C  C  + E  +H  W C  +++ W       +V  +L 
Subjt:  QSIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLP--KVSFLLD

Query:  GFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPS------------PQPRSESCSSQGNWIP
        G        D        + E++R + +  +W IW  RN +   K  P      R +   +   + +K  P+             +P+ +  S    W  
Subjt:  GFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPS------------PQPRSESCSSQGNWIP

Query:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA
        PP G  K+N D S+ +   IG I  I R+S G  IFA
Subjt:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA

BAH93942.1 Os07g0501200 [Oryza sativa Japonica Group]2.8e-3630.57Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        WRVGNG  I+I  DPW+      +PI  K      +V  L++ NG W+   I++ F Q D + I +I   R    D + W PD  G FSV+SAY L  S+
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
         +V  +SSS   +    W+  W      +  I AW+A  NSL TL N  +R ++  ++C +C ++EE  +H    C  +  +W         L     + 
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  VNARDHWS-------KLRIQLKEEERDLAISIIWHIWNHRNSV-KIKKVPP---NHRAVVRDIEISLE-----------GRRYLKNLPSPQPRSESCSSQ
          A   WS       +L + + +EE  + + ++W IW +RN +   K  PP   +HR +V  +    E           G+  + NL   +  S+    +
Subjt:  VNARDHWS-------KLRIQLKEEERDLAISIIWHIWNHRNSV-KIKKVPP---NHRAVVRDIEISLE-----------GRRYLKNLPSPQPRSESCSSQ

Query:  --GNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRIC
           +W  P PG  K+N D S+    G GGIG + R+S GS IF G    C
Subjt:  --GNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRIC

EEC83100.1 hypothetical protein OsI_28249 [Oryza sativa Indica Group]5.7e-3730.23Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        WRVGNG+ I+I  DPW+      +PI  K      +VS L+D NG W+ + I++ F+  D E I  I   R    D + W  D  G FSV+SAY L  S+
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
         +V  +SSS   E    W   W      +  I  WRA  NSL T+ N   + ++  S+C +C  +EE  +H    C  ++ +W+      +  +   R  
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  VNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKK--VPP--NHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQG-------------NWIP
          A D    +  ++ +EER   + ++W IW  RN +   K  VP   + R +   I   LE R++             C++ G              W+ 
Subjt:  VNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKK--VPP--NHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQG-------------NWIP

Query:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICK
        P  G  K+N D S+    G GGIG + R+S G  IFA    +C+
Subjt:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICK

EEE69144.1 hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]1.1e-4031.49Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        W +GNGK +++ +DPW+      +PI  K+     +VS LID +G W+ + I   F+  DAEAI  I L     +D I W PD  G FSV+SAY L  ++
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
          V   SSS  + S       WK  +  +  I AWRAI NSL TL N   R ++ + +C +C  + E   H  + C  ++++W+        + D  +L 
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  --VNARDHWSKLRIQLKE----EERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQP------------RSESCS-----S
           N  +  SK+ + L E    E++ + + ++W IW+ RN +   K  P      R IE  +     +K  P   P            +S S       +
Subjt:  --VNARDHWSKLRIQLKE----EERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQP------------RSESCS-----S

Query:  QGNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA
           W  P PGS K+N D S+ +++G GGIG + R+  G  IFA
Subjt:  QGNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]2.5e-4033.44Show/hide
Query:  RWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQS
        +WR+GNG+ I + ++ W+     +KPI      A + V+ LI+ +  WNE LI   F + DAEAI RI L R   +DE+IW  D KG +SVKS Y +  +
Subjt:  RWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQS

Query:  IISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFR-
        +    + +SS  +E++  W   W      +  I AWRA +N LP+  N+  R +    LC  C KK E+  H    CK  QKIW     K++   D  + 
Subjt:  IISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFR-

Query:  -LEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSWKINSDASW
         +E +      +L+++  +++ +L ++I+W IWN RN+   K V       V   E  LE  R  +   +     +S S    W PP  G +K+N DA+ 
Subjt:  -LEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSWKINSDASW

Query:  SDAKGIGGIGWIARDSNGSPIFAGVK
        +  K I G+G + RD  G+ I A VK
Subjt:  SDAKGIGGIGWIARDSNGSPIFAGVK

TrEMBL top hitse value%identityAlignment
A0A803PJK4 Uncharacterized protein6.2e-3730Show/hide
Query:  MRWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQ
        +RW+VGNG  IK   DPW+     +KP+L K       VS LID +  W+   +K +F+  D + I  IPL   ++ D+IIW  +  G ++VKS Y+L  
Subjt:  MRWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQ

Query:  SIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFR
                S S  S S   W+ FWK     +  I  W+A+Q  LP  + +    I  + +C LCR   ES  H  + CK ++K+W+      SF +D   
Subjt:  SIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFR

Query:  LEVNA-RDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDI-----EISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSWKIN
         E +  +D + K      ++E +    I+W IW  RN       P  H  ++        E     +    +L +   R+   +    W+ PP G  K+N
Subjt:  LEVNA-RDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDI-----EISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSWKIN

Query:  SDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICKKWPSC
        +DA+  +   I G G I RDS+G  + A    + K  P C
Subjt:  SDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICKKWPSC

A0A803PVI9 Uncharacterized protein1.9e-3830.36Show/hide
Query:  MRWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQ
        +RW+VG+G++I    DPW+     +KP+         YVS+ I  +  WN  L+ ++F+ +D E + +IPL      D++IW  +  GA++VKS Y L  
Subjt:  MRWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQ

Query:  SIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWK---FFL-PKVSFLL
        S+    +  ++   + +  W  FW      +  I  WRAI + LPT + +  R I  + +C LC+   E+  H  + CK  +KIW+   F L P +S  +
Subjt:  SIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWK---FFL-PKVSFLL

Query:  DGFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVK--IKKVPPN---HRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSW
            L +   D WS L+I       +  I+I+W IWN RN  K   K  P N   + A+    +     R+     P+    +       +W+ PP G  
Subjt:  DGFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVK--IKKVPPN---HRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSW

Query:  KINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRI
        K+N+DA+ + A    G G I RDSNG  + A  K +
Subjt:  KINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRI

B8BBX0 Reverse transcriptase domain-containing protein2.8e-3730.23Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        WRVGNG+ I+I  DPW+      +PI  K      +VS L+D NG W+ + I++ F+  D E I  I   R    D + W  D  G FSV+SAY L  S+
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
         +V  +SSS   E    W   W      +  I  WRA  NSL T+ N   + ++  S+C +C  +EE  +H    C  ++ +W+      +  +   R  
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  VNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKK--VPP--NHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQG-------------NWIP
          A D    +  ++ +EER   + ++W IW  RN +   K  VP   + R +   I   LE R++             C++ G              W+ 
Subjt:  VNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKK--VPP--NHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQG-------------NWIP

Query:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICK
        P  G  K+N D S+    G GGIG + R+S G  IFA    +C+
Subjt:  PPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICK

B9FYJ3 Uncharacterized protein5.4e-4131.49Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        W +GNGK +++ +DPW+      +PI  K+     +VS LID +G W+ + I   F+  DAEAI  I L     +D I W PD  G FSV+SAY L  ++
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
          V   SSS  + S       WK  +  +  I AWRAI NSL TL N   R ++ + +C +C  + E   H  + C  ++++W+        + D  +L 
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  --VNARDHWSKLRIQLKE----EERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQP------------RSESCS-----S
           N  +  SK+ + L E    E++ + + ++W IW+ RN +   K  P      R IE  +     +K  P   P            +S S       +
Subjt:  --VNARDHWSKLRIQLKE----EERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQP------------RSESCS-----S

Query:  QGNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA
           W  P PGS K+N D S+ +++G GGIG + R+  G  IFA
Subjt:  QGNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFA

C7J4L5 Os07g0501200 protein1.4e-3630.57Show/hide
Query:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI
        WRVGNG  I+I  DPW+      +PI  K      +V  L++ NG W+   I++ F Q D + I +I   R    D + W PD  G FSV+SAY L  S+
Subjt:  WRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSI

Query:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE
         +V  +SSS   +    W+  W      +  I AW+A  NSL TL N  +R ++  ++C +C ++EE  +H    C  +  +W         L     + 
Subjt:  ISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLE

Query:  VNARDHWS-------KLRIQLKEEERDLAISIIWHIWNHRNSV-KIKKVPP---NHRAVVRDIEISLE-----------GRRYLKNLPSPQPRSESCSSQ
          A   WS       +L + + +EE  + + ++W IW +RN +   K  PP   +HR +V  +    E           G+  + NL   +  S+    +
Subjt:  VNARDHWS-------KLRIQLKEEERDLAISIIWHIWNHRNSV-KIKKVPP---NHRAVVRDIEISLE-----------GRRYLKNLPSPQPRSESCSSQ

Query:  --GNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRIC
           +W  P PG  K+N D S+    G GGIG + R+S GS IF G    C
Subjt:  --GNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-0925Show/hide
Query:  WRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFF------LPKVSFLLDGFRLEVNARDHWSKLR
        ++  W     P+     W    N L T   + S G+   ++C LC   +ES +H+F+EC F   +W+FF       P    +     L   +RD  + L 
Subjt:  WRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFF------LPKVSFLLDGFRLEVNARDHWSKLR

Query:  IQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGR
        I+L  +      + ++ IW  RN      V     +V++DI++++  R
Subjt:  IQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGR

AT2G02650.1 Ribonuclease H-like superfamily protein3.0e-1224.29Show/hide
Query:  WKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWK---FFLPKVSFLLDGFRLEVNARDHWSKLRIQLKEEE
        WK    P+     WR +  +L T + + SR ID + +C  C  +EE+  H+ + C ++Q +W+     +         F   +N     SK +      +
Subjt:  WKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWK---FFLPKVSFLLDGFRLEVNARDHWSKLRIQLKEEE

Query:  RDLAISIIWHIWNHRN----SVKIKKVPPNHRAVVRDIEISLEGRRYLKNL---PSPQPRSESCSSQGNWIPPPPGSWKINSDASWSDAKGIGGIGWIAR
        R L   I+W +W  RN      K +      R  ++D    L      +N     +  P   S      W PPP G  K N D+ ++        GW  R
Subjt:  RDLAISIIWHIWNHRN----SVKIKKVPPNHRAVVRDIEISLEGRRYLKNL---PSPQPRSESCSSQGNWIPPPPGSWKINSDASWSDAKGIGGIGWIAR

Query:  DSNGSPIFAG
        + NG  +  G
Subjt:  DSNGSPIFAG

AT3G09510.1 Ribonuclease H-like superfamily protein2.7e-2123.96Show/hide
Query:  RWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGG---WNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLL
        R  +G+G++I+IG D  V + +  +P+  ++      ++ L +  G    W+++ I +   Q+D   I RI L +    D+IIW  +  G ++V+S Y L
Subjt:  RWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGG---WNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLL

Query:  GQSIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDG
             S    + +    S       W     P+     WRA+  +L T   + +RG+  +  C  C ++ ES +H  + C F+   W+      S L+  
Subjt:  GQSIISVGRASSSDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDG

Query:  FRLEVNARDHWSKL-----RIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPS----PQPRSESCSSQGNWIPPPPG
          +  +  ++ S +        + +  + L + +IW IW  RN+V   K   +    V  +    E   +L    S    P P  +   ++  W  PP  
Subjt:  FRLEVNARDHWSKL-----RIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPS----PQPRSESCSSQGNWIPPPPG

Query:  SWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRI
          K N DA +   K     GWI R+  G+PI  G  ++
Subjt:  SWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRI

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.2e-0923.78Show/hide
Query:  WKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLEVNARDHWSKLRIQLKEEERDL
        W     P+     W    N L T   + + G+   + C LC   ++S +H+F+EC+FS  +W+FF    +             D  + L    +E+   L
Subjt:  WKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLEVNARDHWSKLRIQLKEEERDL

Query:  AISIIWH-----IWNHRNSVKIKKVPPNHRAVVRDIEISLEGR
         I + +H     IW  RN      V  +  ++++DI++ +  R
Subjt:  AISIIWH-----IWNHRNSVKIKKVPPNHRAVVRDIEISLEGR

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.8e-1122.49Show/hide
Query:  MRWRVGNGKHIKIGEDPWV--GEVNGYKPILLKKELAGSYVSTLIDG--NGGWNENLIKESFIQADAEAIARIPLGRLA-NQDEIIWGPDPKGAFSVKSA
        MR  +GNG+      D W   G++  +      ++L     + +++   NG W     +    Q    A+   P+   +  QD  +W        +   +
Subjt:  MRWRVGNGKHIKIGEDPWV--GEVNGYKPILLKKELAGSYVSTLIDG--NGGWNENLIKESFIQADAEAIARIPLGRLA-NQDEIIWGPDPKGAFSVKSA

Query:  YLLGQSIISVGRASSSDLSESKATW-RDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFL----P
        YL   S  S        +      W +  W  +  PR ++  W +    LPT   +   G++  S   LC   +E+ +H+F+EC FS  IW+FF     P
Subjt:  YLLGQSIISVGRASSSDLSESKATW-RDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFL----P

Query:  KVSFLL---DGFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQPRSES
           F L     + L++  R H + +   L +       S ++H+W  RN+     +  +  ++   I+ ++  R  L + PS   RS S
Subjt:  KVSFLL---DGFRLEVNARDHWSKLRIQLKEEERDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQPRSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGCGGGTTGGAAATGGCAAGCATATCAAAATTGGGGAAGATCCTTGGGTGGGAGAGGTTAATGGTTATAAGCCGATCTTGTTGAAAAAAGAGTTGGCAGGTTC
CTATGTGAGTACCCTTATTGATGGGAATGGGGGCTGGAACGAAAATCTCATTAAAGAGAGTTTTATCCAAGCTGATGCAGAAGCTATTGCCAGAATCCCTTTGGGAAGGC
TTGCCAATCAGGATGAAATAATCTGGGGTCCGGATCCAAAAGGAGCTTTCTCGGTGAAGAGTGCTTATCTTTTAGGCCAATCCATTATTTCAGTGGGAAGAGCTTCCTCT
TCAGACCTTTCAGAATCAAAAGCAACGTGGAGGGACTTTTGGAAGGCAAAATCAAAACCTAGAGAAACAATATGTGCTTGGAGGGCTATTCAAAATTCTCTTCCCACCCT
CTCAAATATTGTGTCTAGAGGAATAGATACTAACTCTCTATGTTTTCTTTGCAGGAAAAAGGAAGAATCGGGCAGCCATGTTTTTTGGGAATGTAAGTTTTCTCAGAAAA
TTTGGAAGTTCTTCCTCCCTAAGGTTAGTTTTCTTCTCGATGGTTTCAGGTTGGAGGTCAATGCTAGGGATCATTGGAGCAAGCTGAGGATCCAACTAAAAGAAGAGGAG
AGGGACCTAGCTATTAGCATCATTTGGCATATTTGGAACCATCGAAATTCAGTCAAAATTAAAAAAGTTCCGCCAAACCACAGAGCAGTCGTTAGAGATATCGAGATTAG
CTTGGAAGGTAGGAGGTACCTGAAGAATCTGCCTTCGCCTCAGCCTAGATCGGAGAGTTGCTCGAGTCAGGGGAATTGGATCCCTCCCCCTCCGGGAAGCTGGAAAATCA
ACTCCGATGCCTCGTGGTCGGACGCAAAGGGTATCGGAGGGATCGGTTGGATAGCCCGTGACTCCAATGGGTCTCCCATCTTCGCTGGAGTAAAGAGGATTTGCAAGAAA
TGGCCGAGTTGTATGTTAGTGTTATTGAGTATTCAAGTTTCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGCGGGTTGGAAATGGCAAGCATATCAAAATTGGGGAAGATCCTTGGGTGGGAGAGGTTAATGGTTATAAGCCGATCTTGTTGAAAAAAGAGTTGGCAGGTTC
CTATGTGAGTACCCTTATTGATGGGAATGGGGGCTGGAACGAAAATCTCATTAAAGAGAGTTTTATCCAAGCTGATGCAGAAGCTATTGCCAGAATCCCTTTGGGAAGGC
TTGCCAATCAGGATGAAATAATCTGGGGTCCGGATCCAAAAGGAGCTTTCTCGGTGAAGAGTGCTTATCTTTTAGGCCAATCCATTATTTCAGTGGGAAGAGCTTCCTCT
TCAGACCTTTCAGAATCAAAAGCAACGTGGAGGGACTTTTGGAAGGCAAAATCAAAACCTAGAGAAACAATATGTGCTTGGAGGGCTATTCAAAATTCTCTTCCCACCCT
CTCAAATATTGTGTCTAGAGGAATAGATACTAACTCTCTATGTTTTCTTTGCAGGAAAAAGGAAGAATCGGGCAGCCATGTTTTTTGGGAATGTAAGTTTTCTCAGAAAA
TTTGGAAGTTCTTCCTCCCTAAGGTTAGTTTTCTTCTCGATGGTTTCAGGTTGGAGGTCAATGCTAGGGATCATTGGAGCAAGCTGAGGATCCAACTAAAAGAAGAGGAG
AGGGACCTAGCTATTAGCATCATTTGGCATATTTGGAACCATCGAAATTCAGTCAAAATTAAAAAAGTTCCGCCAAACCACAGAGCAGTCGTTAGAGATATCGAGATTAG
CTTGGAAGGTAGGAGGTACCTGAAGAATCTGCCTTCGCCTCAGCCTAGATCGGAGAGTTGCTCGAGTCAGGGGAATTGGATCCCTCCCCCTCCGGGAAGCTGGAAAATCA
ACTCCGATGCCTCGTGGTCGGACGCAAAGGGTATCGGAGGGATCGGTTGGATAGCCCGTGACTCCAATGGGTCTCCCATCTTCGCTGGAGTAAAGAGGATTTGCAAGAAA
TGGCCGAGTTGTATGTTAGTGTTATTGAGTATTCAAGTTTCTGTTTGA
Protein sequenceShow/hide protein sequence
MRWRVGNGKHIKIGEDPWVGEVNGYKPILLKKELAGSYVSTLIDGNGGWNENLIKESFIQADAEAIARIPLGRLANQDEIIWGPDPKGAFSVKSAYLLGQSIISVGRASS
SDLSESKATWRDFWKAKSKPRETICAWRAIQNSLPTLSNIVSRGIDTNSLCFLCRKKEESGSHVFWECKFSQKIWKFFLPKVSFLLDGFRLEVNARDHWSKLRIQLKEEE
RDLAISIIWHIWNHRNSVKIKKVPPNHRAVVRDIEISLEGRRYLKNLPSPQPRSESCSSQGNWIPPPPGSWKINSDASWSDAKGIGGIGWIARDSNGSPIFAGVKRICKK
WPSCMLVLLSIQVSV