; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028901 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028901
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:32555624..32556924
RNA-Seq ExpressionLag0028901
SyntenyLag0028901
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]3.3e-2737.56Show/hide
Query:  IAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTS
        + + K++    E+C   K  L+   CF+V+  G SGGL LLWK D+                               +P+   ++ TW LL  L++    
Subjt:  IAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTS

Query:  AWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPV
         W++GGD NE+L   +K+GG  RS + M  F + + DC LRDL F G  +TWCN R G   I ERLDRF GN +FC LFPQ+ V +   A SDH PV
Subjt:  AWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPV

XP_018859783.1 uncharacterized protein LOC109021580 [Juglans regia]3.1e-2536.32Show/hide
Query:  KLKNLLNYAGCFSVNSCGASGGLCLLWKSDVD------PKDHL---------------------------QFQTWELLHHLHNCDTSAWVIGGDLNEVLW
        + K  L + GC +V+  G+SGGL LLWK +V+         H+                           + +TW LLHHL    +  W++ GD NE+L 
Subjt:  KLKNLLNYAGCFSVNSCGASGGLCLLWKSDVD------PKDHL---------------------------QFQTWELLHHLHNCDTSAWVIGGDLNEVLW

Query:  DAKKQGGMARSFDLMSNFSSALHDCGLRDLDFT-GDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLE
          +K+GG  RS  LM +F +AL DC L+DL F+ G  FTWCN R G+  I+ERLDR   + ++ + FP +QV + + + SDH P+ L+ E
Subjt:  DAKKQGGMARSFDLMSNFSSALHDCGLRDLDFT-GDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLE

XP_022841874.1 uncharacterized protein LOC111365549 [Olea europaea var. sylvestris]1.8e-2535.05Show/hide
Query:  LNYAGCFSVNSCGASGGLCLLWKSDVD------------------------------PKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAKKQGGM
        L + GC +V + G SGG+ LLWKS+V+                              P+   + +TW LL  L    + AW++ GD NE+L + +K GG 
Subjt:  LNYAGCFSVNSCGASGGLCLLWKSDVD------------------------------PKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAKKQGGM

Query:  ARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLE-PSLRLLGDKAWR
         R    + NF     +C LRDL F G  +TW N R   ++I+ERLDRF  N+ +C+LF Q  V + +   SDHRP+ + L+  S  L G K +R
Subjt:  ARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLE-PSLRLLGDKAWR

XP_030478213.1 uncharacterized protein LOC115695276 [Cannabis sativa]4.8e-2634.31Show/hide
Query:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK
        L+  L + GCF V + G SGGL L+W   +                               DP    +  +W +L+ +    T  W+IGGD NE+L   +
Subjt:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK

Query:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELS-LEPSLRLLGDKAWRS
        K+GG  +   L++NF  AL DC LR+++F G++FTWCN R  D+ I+ERLDR  GN ++  +FP  +VF+L    SDH P+ L+  +  L  +    W S
Subjt:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELS-LEPSLRLLGDKAWRS

Query:  SFKF
         F F
Subjt:  SFKF

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]1.1e-2537.06Show/hide
Query:  IAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTS
        + + K+   G E C   K  L +  CFS++S G SGGL L+W SD+                               +P+   +  TW L+  L++ +  
Subjt:  IAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTS

Query:  AWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPV
         W++GG+ NEVL   +K+GG  RS   +  F   L DC LRDL F G  FTW N R GD  I +RLDR+ GN  FC LFPQ  V +   A SDH PV
Subjt:  AWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPV

TrEMBL top hitse value%identityAlignment
A0A803P912 Uncharacterized protein2.2e-2433.83Show/hide
Query:  LNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAKKQGG
        L + GCF V + G SGGL L+W   V                               DP    +  +W L + +    +  W+IGGD NE+L   +K GG
Subjt:  LNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAKKQGG

Query:  MARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLEPSLRLLGDKA--WRSSFK
          +   LM+NF  AL +C LR+++F G+++TWCN R  ++ I+ERLDR  GN ++  +FP  ++F+L    SDH P+ L+     +L G K   W S F 
Subjt:  MARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLEPSLRLLGDKA--WRSSFK

Query:  F
        F
Subjt:  F

A0A803PHH5 Uncharacterized protein5.1e-2634.8Show/hide
Query:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK
        L+  L + GCF V + G SGGL LLW   +                               DP    +  +W LL+ +    T  W+IGGD NE+L   +
Subjt:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK

Query:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLEPSLR-LLGDKAWRS
        K+GG  +   LM+NF  AL DC LR+++F G++FTWCN R  ++ I+ERLDR  GN ++  LFP  +V +L    SDH P+ L+ +   +  +    W S
Subjt:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLEPSLR-LLGDKAWRS

Query:  SFKF
         F F
Subjt:  SFKF

A0A803PPS5 Uncharacterized protein1.0e-2634.96Show/hide
Query:  SSSDIAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHN
        S S + K K E+        L+ +L + GCF V + G SG L LLW ++V                               DP  + +  +W LL+ +  
Subjt:  SSSDIAKRKVEDDGGEHCGKLKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHN

Query:  CDTSAWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRP
          +  WVI GD NE+L    K GG  +   LM+NF  AL+DC LR++DF G  +TWCN RP ++ I+ERLDR  GNEE+  LFP  +V +L+   SDH P
Subjt:  CDTSAWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRP

Query:  VEL-SLEPSLRLLGDKAWRSSFKFNA
        + L +++ S        W S F F +
Subjt:  VEL-SLEPSLRLLGDKAWRSSFKFNA

A0A803PRV5 Uncharacterized protein8.4e-2935.44Show/hide
Query:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK
        L+  L + GCF+V + G SGGL LLW  D+                               DP    +F +W+LL  L+   T  WV+GGD NE+L   +
Subjt:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK

Query:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVEL-SLEPSLRLLGDKAWRS
        K GG+ +   L++NF  AL  C LRD+ + G+ +TWCN R  +D I+ERLDR  GN ++  +FP  +V +L+   SDH P+ L   +P L++     WR+
Subjt:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVEL-SLEPSLRLLGDKAWRS

Query:  SFKFNA
         F F +
Subjt:  SFKFNA

A0A803Q852 Uncharacterized protein2.3e-2634.31Show/hide
Query:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK
        L+  L + GCF V + G SGGL L+W   +                               DP    +  +W +L+ +    T  W+IGGD NE+L   +
Subjt:  LKNLLNYAGCFSVNSCGASGGLCLLWKSDV-------------------------------DPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAK

Query:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELS-LEPSLRLLGDKAWRS
        K+GG  +   L++NF  AL DC LR+++F G++FTWCN R  D+ I+ERLDR  GN ++  +FP  +VF+L    SDH P+ L+  +  L  +    W S
Subjt:  KQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYERLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELS-LEPSLRLLGDKAWRS

Query:  SFKF
         F F
Subjt:  SFKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGTCTCCGAAGGATGGGCTGAATGCGGTTGTTGGGCCGGGATCGAGTGAGGGTGTTGGGCCAGACCCCGTTATGCTTCCTGCGTCCGGTACACTGAATGTTGG
GCTAGATCCGAGTTCTGCTACTAGGCCGAGTAGGTCTGCGACTGATGGGCTGGAAAATTCAGATTCTATTGTTGGGCTTAAGGGATCTGCCAGTGTGGTTGGGTCGCGGA
AGACGCGCCTTTGCATGGGTTCAGGGGCTAGTAGTAGTGATATTGCGAAACGGAAGGTAGAGGATGATGGTGGGGAGCACTGTGGAAAGTTGAAAAACCTTTTGAATTAT
GCTGGGTGTTTTTCTGTTAATAGTTGTGGTGCTAGTGGTGGTTTATGTTTACTGTGGAAGTCTGATGTGGATCCAAAGGACCATCTTCAATTTCAAACGTGGGAGTTGCT
TCATCATTTGCATAATTGTGATACCTCGGCTTGGGTTATTGGTGGTGATCTGAATGAAGTTTTGTGGGATGCTAAGAAACAAGGTGGAATGGCTCGGTCTTTTGACTTAA
TGTCGAATTTCAGTTCTGCGTTGCATGACTGTGGGCTCCGAGATCTTGATTTTACTGGGGATGTGTTCACGTGGTGTAACCGTCGACCCGGTGATGATCGTATTTATGAA
CGGTTGGATCGGTTTGCTGGGAATGAAGAGTTTTGTAAGTTGTTTCCTCAGTATCAGGTCTTTAATCTGAATTGGGCGTGTTCTGATCACCGGCCTGTGGAGCTATCTTT
GGAGCCATCTCTTCGGTTGTTGGGGGATAAGGCTTGGAGATCGAGCTTCAAGTTTAACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAGTCTCCGAAGGATGGGCTGAATGCGGTTGTTGGGCCGGGATCGAGTGAGGGTGTTGGGCCAGACCCCGTTATGCTTCCTGCGTCCGGTACACTGAATGTTGG
GCTAGATCCGAGTTCTGCTACTAGGCCGAGTAGGTCTGCGACTGATGGGCTGGAAAATTCAGATTCTATTGTTGGGCTTAAGGGATCTGCCAGTGTGGTTGGGTCGCGGA
AGACGCGCCTTTGCATGGGTTCAGGGGCTAGTAGTAGTGATATTGCGAAACGGAAGGTAGAGGATGATGGTGGGGAGCACTGTGGAAAGTTGAAAAACCTTTTGAATTAT
GCTGGGTGTTTTTCTGTTAATAGTTGTGGTGCTAGTGGTGGTTTATGTTTACTGTGGAAGTCTGATGTGGATCCAAAGGACCATCTTCAATTTCAAACGTGGGAGTTGCT
TCATCATTTGCATAATTGTGATACCTCGGCTTGGGTTATTGGTGGTGATCTGAATGAAGTTTTGTGGGATGCTAAGAAACAAGGTGGAATGGCTCGGTCTTTTGACTTAA
TGTCGAATTTCAGTTCTGCGTTGCATGACTGTGGGCTCCGAGATCTTGATTTTACTGGGGATGTGTTCACGTGGTGTAACCGTCGACCCGGTGATGATCGTATTTATGAA
CGGTTGGATCGGTTTGCTGGGAATGAAGAGTTTTGTAAGTTGTTTCCTCAGTATCAGGTCTTTAATCTGAATTGGGCGTGTTCTGATCACCGGCCTGTGGAGCTATCTTT
GGAGCCATCTCTTCGGTTGTTGGGGGATAAGGCTTGGAGATCGAGCTTCAAGTTTAACGCTTAA
Protein sequenceShow/hide protein sequence
MGQSPKDGLNAVVGPGSSEGVGPDPVMLPASGTLNVGLDPSSATRPSRSATDGLENSDSIVGLKGSASVVGSRKTRLCMGSGASSSDIAKRKVEDDGGEHCGKLKNLLNY
AGCFSVNSCGASGGLCLLWKSDVDPKDHLQFQTWELLHHLHNCDTSAWVIGGDLNEVLWDAKKQGGMARSFDLMSNFSSALHDCGLRDLDFTGDVFTWCNRRPGDDRIYE
RLDRFAGNEEFCKLFPQYQVFNLNWACSDHRPVELSLEPSLRLLGDKAWRSSFKFNA