; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028916 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028916
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:32850752..32852213
RNA-Seq ExpressionLag0028916
SyntenyLag0028916
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]6.6e-3941.83Show/hide
Query:  GPGEEK--VKVRTNSPKRGKSPEKSRDKKESRGYGARGFWRKEKNVC-----LLLQFNRRDIGGGWEPTPPDAMKILCWNARGWGTPVACEGLSGGLGLF
        G G+ K  V V   + K+G+  E+S+   E+ G G  G     + V       L+  +   + GGW      A  I    +      V C G SGGL L 
Subjt:  GPGEEK--VKVRTNSPKRGKSPEKSRDKKESRGYGARGFWRKEKNVC-----LLLQFNRRDIGGGWEPTPPDAMKILCWNARGWGTPVACEGLSGGLGLF

Query:  WKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCK
        W  D  VSV SFS GHIDA++K    + WRF GFYGNP+A  R+DSW+LL RL   G  ++PWI GGDFNEIL  +EK G  DRS   + +FQ+A+  C 
Subjt:  WKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCK

Query:  LKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
        L D+GF G  FTW   R     V+ERLDR+F NQ   ++   +KV +  F  SDHRPI   L+
Subjt:  LKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]2.5e-3851.18Show/hide
Query:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ
        SGGL L W  D  VSV SF+ GHIDA++K      WRF GFYGNP+A  R +SW+LL RL D+   ++PWI GGDFNEIL  +EK G +DRS   M  FQ
Subjt:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ

Query:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   D+   +KV +  F  SDHRPI+  L+
Subjt:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]2.5e-3851.18Show/hide
Query:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ
        SGGL L W  D  VSV SF+ GHIDA++K      WRF GFYGNP+A  R +SW+LL RL D+   ++PWI GGDFNEIL  +EK G +DRS   M  FQ
Subjt:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ

Query:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   D+   +KV +  F  SDHRPI+  L+
Subjt:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]7.6e-4338.43Show/hide
Query:  GLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMEN
        G+ GGL LFW SD+ V++ SFS  HIDA+++ +S   WR  G YG+ +A ++  +W LLK L ++   N  W   GDFNEIL+SHEK+G  D S  +M  
Subjt:  GLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMEN

Query:  FQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIV-------GLDFNEILF---------------
        F+E++  C L D+G+   K+TW   R  +N ++E LDR F ++      +++  T L+   SDH PI+         L++ +  F               
Subjt:  FQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIV-------GLDFNEILF---------------

Query:  SHEKVGGADRSPKLMENFEEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDR
        S+ K+GG DRS  +M  F+E++  C L D+GF G KFTW   R   N ++ERLDR
Subjt:  SHEKVGGADRSPKLMENFEEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDR

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]4.2e-4139.51Show/hide
Query:  MKILCWNARGWGTP--------------------------------VACE------------GLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSW--S
        MKILCWN RG G P                                + C+            GLSGGL L W  +I + + SFS+GH+D++I   S   S
Subjt:  MKILCWNARGWGTP--------------------------------VACE------------GLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSW--S

Query:  WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLD
        W F GFYGNP A  R DSW+LL+RL D  Q ++PW+  GDFNEIL++HEK G A RS + M+ F++ +  C L D+GF G+ FTW  GR+ +  ++ERLD
Subjt:  WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLD

Query:  RFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLDFNEILFSH
        R  VN+  L+     +V HL    SDH PI++ L+  +   +H
Subjt:  RFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLDFNEILFSH

TrEMBL top hitse value%identityAlignment
A0A7J6DPD3 CCHC-type domain-containing protein1.2e-3851.18Show/hide
Query:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ
        SGGL L W  D  VSV SF+ GHIDA++K      WRF GFYGNP+A  R +SW+LL RL D+   ++PWI GGDFNEIL  +EK G +DRS   M  FQ
Subjt:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ

Query:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   D+   +KV +  F  SDHRPI+  L+
Subjt:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

A0A7J6DZ24 CCHC-type domain-containing protein3.2e-3941.83Show/hide
Query:  GPGEEK--VKVRTNSPKRGKSPEKSRDKKESRGYGARGFWRKEKNVC-----LLLQFNRRDIGGGWEPTPPDAMKILCWNARGWGTPVACEGLSGGLGLF
        G G+ K  V V   + K+G+  E+S+   E+ G G  G     + V       L+  +   + GGW      A  I    +      V C G SGGL L 
Subjt:  GPGEEK--VKVRTNSPKRGKSPEKSRDKKESRGYGARGFWRKEKNVC-----LLLQFNRRDIGGGWEPTPPDAMKILCWNARGWGTPVACEGLSGGLGLF

Query:  WKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCK
        W  D  VSV SFS GHIDA++K    + WRF GFYGNP+A  R+DSW+LL RL   G  ++PWI GGDFNEIL  +EK G  DRS   + +FQ+A+  C 
Subjt:  WKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAVCYCK

Query:  LKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
        L D+GF G  FTW   R     V+ERLDR+F NQ   ++   +KV +  F  SDHRPI   L+
Subjt:  LKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

A0A7J6FPV7 CCHC-type domain-containing protein2.1e-3850Show/hide
Query:  VACEGLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPK
        V C G SGGL L W  D  VSV SFS GHIDA++K    + WRF GFYGNP+A  R++SW+LL RL   G  ++PWI GGDFNE+L  +EK G  DRS  
Subjt:  VACEGLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPK

Query:  LMENFQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         + +FQ+A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   ++   +KV +  F  SDHRPI   L+
Subjt:  LMENFQEAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

A0A7J6GGL8 CCHC-type domain-containing protein1.2e-3851.18Show/hide
Query:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ
        SGGL L W  D  VSV SF+ GHIDA++K      WRF GFYGNP+A  R +SW+LL RL D+   ++PWI GGDFNEIL  +EK G +DRS   M  FQ
Subjt:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ

Query:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   D+   +KV +  F  SDHRPI+  L+
Subjt:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

A0A7J6GL46 CCHC-type domain-containing protein1.2e-3851.18Show/hide
Query:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ
        SGGL L W  D  VSV SF+ GHIDA++K      WRF GFYGNP+A  R +SW+LL RL D+   ++PWI GGDFNEIL  +EK G +DRS   M  FQ
Subjt:  SGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWS-WRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQ

Query:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD
         A+  C L D+GF G  FTW   R     V+ERLDR+F NQ   D+   +KV +  F  SDHRPI+  L+
Subjt:  EAVCYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGTGACATGTCAACCAAACAATCTGAAGGAAAAAAAGAAAAAGAGGTGGGAAGCAGTGAGGCAGATCAGATCATTAGGAGTACTACATTTGGCCCAGGTGAAGA
AAAGGTTAAAGTTAGGACCAATAGCCCAAAAAGAGGAAAAAGCCCAGAGAAGTCCAGAGATAAAAAGGAAAGCAGAGGATATGGAGCTAGAGGGTTCTGGAGGAAAGAAA
AGAACGTGTGTCTCTTACTTCAATTCAACCGAAGGGATATCGGCGGAGGCTGGGAGCCAACCCCGCCGGACGCCATGAAAATCTTATGTTGGAACGCTCGGGGGTGGGGA
ACCCCGGTTGCATGTGAGGGCCTTAGCGGAGGGCTGGGGCTGTTTTGGAAGTCTGATATTTCGGTTAGCGTCCTGTCTTTTTCTAAAGGGCATATTGACGCAATGATTAA
GTATAGATCATGGTCTTGGAGATTCTGTGGATTCTATGGTAATCCCCAAGCTGATAAAAGAGTGGACTCTTGGAAACTTCTGAAAAGGCTACATGACATTGGCCAATCGA
ATGTTCCGTGGATACTAGGAGGCGATTTTAATGAAATCTTGTTCAGTCATGAGAAAGTAGGAAGGGCGGACAGAAGCCCAAAACTTATGGAAAATTTTCAAGAGGCAGTT
TGCTACTGTAAGCTAAAGGATGTGGGCTTCTCGGGGAGTAAGTTCACTTGGTTTAGAGGTCGTTCTCATAATAACAGAGTTAAGGAGCGGTTGGACAGATTTTTTGTTAA
TCAGCTGATGTTGGACATGCTAAAAGATATTAAGGTAACCCATCTCCTTTTCCACGGGTCTGATCATAGGCCCATTATTGTGGGTTTGGACTTTAATGAAATCTTGTTCA
GTCATGAGAAAGTAGGAGGGGCGGACAGAAGCCCAAAACTTATGGAAAATTTTGAGGAGGCAGTTTGCTACTGTAAGCTAAAGGATGTGGGCTTCTCGGGGAGTAAGTTC
ACTTGGTTTAGGGGTCGTTCTCATAATAACAGAGTTAAGGAGCGGTTGGACAGATTTTTTGTTAATCAGCTGATGTTGGACTTGCTTAAAGATATTAAGGTAGAATGGGG
AGAGTTTTTAGCCAGAGGAAGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGTGACATGTCAACCAAACAATCTGAAGGAAAAAAAGAAAAAGAGGTGGGAAGCAGTGAGGCAGATCAGATCATTAGGAGTACTACATTTGGCCCAGGTGAAGA
AAAGGTTAAAGTTAGGACCAATAGCCCAAAAAGAGGAAAAAGCCCAGAGAAGTCCAGAGATAAAAAGGAAAGCAGAGGATATGGAGCTAGAGGGTTCTGGAGGAAAGAAA
AGAACGTGTGTCTCTTACTTCAATTCAACCGAAGGGATATCGGCGGAGGCTGGGAGCCAACCCCGCCGGACGCCATGAAAATCTTATGTTGGAACGCTCGGGGGTGGGGA
ACCCCGGTTGCATGTGAGGGCCTTAGCGGAGGGCTGGGGCTGTTTTGGAAGTCTGATATTTCGGTTAGCGTCCTGTCTTTTTCTAAAGGGCATATTGACGCAATGATTAA
GTATAGATCATGGTCTTGGAGATTCTGTGGATTCTATGGTAATCCCCAAGCTGATAAAAGAGTGGACTCTTGGAAACTTCTGAAAAGGCTACATGACATTGGCCAATCGA
ATGTTCCGTGGATACTAGGAGGCGATTTTAATGAAATCTTGTTCAGTCATGAGAAAGTAGGAAGGGCGGACAGAAGCCCAAAACTTATGGAAAATTTTCAAGAGGCAGTT
TGCTACTGTAAGCTAAAGGATGTGGGCTTCTCGGGGAGTAAGTTCACTTGGTTTAGAGGTCGTTCTCATAATAACAGAGTTAAGGAGCGGTTGGACAGATTTTTTGTTAA
TCAGCTGATGTTGGACATGCTAAAAGATATTAAGGTAACCCATCTCCTTTTCCACGGGTCTGATCATAGGCCCATTATTGTGGGTTTGGACTTTAATGAAATCTTGTTCA
GTCATGAGAAAGTAGGAGGGGCGGACAGAAGCCCAAAACTTATGGAAAATTTTGAGGAGGCAGTTTGCTACTGTAAGCTAAAGGATGTGGGCTTCTCGGGGAGTAAGTTC
ACTTGGTTTAGGGGTCGTTCTCATAATAACAGAGTTAAGGAGCGGTTGGACAGATTTTTTGTTAATCAGCTGATGTTGGACTTGCTTAAAGATATTAAGGTAGAATGGGG
AGAGTTTTTAGCCAGAGGAAGCCTTTGA
Protein sequenceShow/hide protein sequence
MLSDMSTKQSEGKKEKEVGSSEADQIIRSTTFGPGEEKVKVRTNSPKRGKSPEKSRDKKESRGYGARGFWRKEKNVCLLLQFNRRDIGGGWEPTPPDAMKILCWNARGWG
TPVACEGLSGGLGLFWKSDISVSVLSFSKGHIDAMIKYRSWSWRFCGFYGNPQADKRVDSWKLLKRLHDIGQSNVPWILGGDFNEILFSHEKVGRADRSPKLMENFQEAV
CYCKLKDVGFSGSKFTWFRGRSHNNRVKERLDRFFVNQLMLDMLKDIKVTHLLFHGSDHRPIIVGLDFNEILFSHEKVGGADRSPKLMENFEEAVCYCKLKDVGFSGSKF
TWFRGRSHNNRVKERLDRFFVNQLMLDLLKDIKVEWGEFLARGSL