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Lag0028929 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028929
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:33017467..33018030
RNA-Seq ExpressionLag0028929
SyntenyLag0028929
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5475421.1 hypothetical protein F2P56_007226 [Juglans regia]3.0e-2435.16Show/hide
Query:  DELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFDR
        +EL  +WK + LTE+E   +   +D +  +      CL+  +I  K +N +AFR+ M   W++    +      N F I+F     R RV+K  PWSFDR
Subjt:  DELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFDR

Query:  SLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRG
         L+ L + + N  + D+ FT E F++QVH +P+  MT ++ K IG++VG + +V  D+     G  MRI V +D  K L RG
Subjt:  SLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]7.6e-3637.97Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ + W+ +  T  E + +       + +A+++ LC+VA++  SK+++ +A RSVMK  WR H+ TR E    NI+ I F+S  ++ RV+ SGPW+F+
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE
        +SL+VL S    +Q  D++F   AF+IQ+H +P  C++ +M  ++G  +G +EE++ D    W+GP +R+ V +D+ KPL+RG KL+
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.6e-3640.32Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ E W+ + LT+++ + I   ++  L + E++    V ++  SK+++ +AFRSVMK  W+ H  T +E+A  N++ I F+S  ++ RV+ SGPWSF+
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKL
         SL+VL S    DQ RD++F   A +IQ+H +P  CM  DM K +G  +G +EE+DC+    W+GP +R+ V +DI KP +RG K+
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKL

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]4.3e-3135.29Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MD++ + W+ + L ++E   I   N   + + ++I LC V ++  SK++  +AF SVMK  W+ H+ TR+E+A  NI+ I F++  +++RV   GPW+FD
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE
        +SL++L      ++  D+D +  AF++Q+H +   CMT DM K +G  +G +EEVD     +W  P + + V ++++KPL+RG K++
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.0e-2741.67Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ E W+ + LT +E +     N   + +AE+I LC V ++  SK+++  A  SVMK  W+ H  TR+E+A  NI+ I F++ +++ RV+ SGPW+FD
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVD
        +SL VL S    D+  D+DF   AF++Q+H +P   +T DM KL+G+ +G +EEVD
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVD

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179023.7e-3637.97Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ + W+ +  T  E + +       + +A+++ LC+VA++  SK+++ +A RSVMK  WR H+ TR E    NI+ I F+S  ++ RV+ SGPW+F+
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE
        +SL+VL S    +Q  D++F   AF+IQ+H +P  C++ +M  ++G  +G +EE++ D    W+GP +R+ V +D+ KPL+RG KL+
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE

A0A6J1DP89 uncharacterized protein LOC1110229321.3e-3640.32Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ E W+ + LT+++ + I   ++  L + E++    V ++  SK+++ +AFRSVMK  W+ H  T +E+A  N++ I F+S  ++ RV+ SGPWSF+
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKL
         SL+VL S    DQ RD++F   A +IQ+H +P  CM  DM K +G  +G +EE+DC+    W+GP +R+ V +DI KP +RG K+
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKL

A0A6J1DVS4 uncharacterized protein LOC1110235552.1e-3135.29Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MD++ + W+ + L ++E   I   N   + + ++I LC V ++  SK++  +AF SVMK  W+ H+ TR+E+A  NI+ I F++  +++RV   GPW+FD
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE
        +SL++L      ++  D+D +  AF++Q+H +   CMT DM K +G  +G +EEVD     +W  P + + V ++++KPL+RG K++
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE

A0A6J1DYG3 uncharacterized protein LOC1110246764.8e-2841.67Show/hide
Query:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD
        MDE+ E W+ + LT +E +     N   + +AE+I LC V ++  SK+++  A  SVMK  W+ H  TR+E+A  NI+ I F++ +++ RV+ SGPW+FD
Subjt:  MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFD

Query:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVD
        +SL VL S    D+  D+DF   AF++Q+H +P   +T DM KL+G+ +G +EEVD
Subjt:  RSLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVD

A0A6P9EQ08 uncharacterized protein LOC1090209821.5e-2435.71Show/hide
Query:  DELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFDR
        +EL  +WK + LTE+E   +   +D +  +      CL+  +I  K +N +AFR+ M   WR+    +      N F I+F     R RV+K  PWSFDR
Subjt:  DELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFDR

Query:  SLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRG
         L+ L + + N  + D+ FT E F++QVH +P+  MT ++ K IG++VG + +V  D+     G  MRI V + I K L RG
Subjt:  SLIVLKSLKENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAACTTGTGGAGCGTTGGAAGAGATGGGCGTTGACTGAGAAGGAGATGAAGGTTATTGAGGCGGTGAATGATAATGTGCTCTTTTCAGCTGAAGATATTGGGTT
ATGCCTAGTTGCTAGGGTGATCTTAAGCAAACAGGTAAATTGTGATGCGTTTAGATCGGTTATGAAGGGGGCGTGGAGGGCTCATCACGGTACACGAGTGGAGTCGGCTG
ACAATAACATTTTCTTCATACAGTTTCGATCTGGAATGAAGAGATTGAGGGTGATGAAATCAGGTCCATGGTCCTTTGATAGGTCACTCATAGTACTAAAGTCGTTGAAG
GAGAATGATCAGATTCGTGATCTGGATTTTACTGCAGAGGCGTTTTTTATCCAGGTTCATAAAGTCCCGGTCAACTGTATGACTGTTGATATGGAAAAACTGATTGGGGA
GGACGTGGGAATTTTGGAGGAGGTGGATTGTGACGAGGTGAGCAATTGGTCGGGGCCGGTGATGAGAATTTGGGTGGTGGTGGACATAATGAAACCACTTCAGAGGGGGC
CAAAATTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAACTTGTGGAGCGTTGGAAGAGATGGGCGTTGACTGAGAAGGAGATGAAGGTTATTGAGGCGGTGAATGATAATGTGCTCTTTTCAGCTGAAGATATTGGGTT
ATGCCTAGTTGCTAGGGTGATCTTAAGCAAACAGGTAAATTGTGATGCGTTTAGATCGGTTATGAAGGGGGCGTGGAGGGCTCATCACGGTACACGAGTGGAGTCGGCTG
ACAATAACATTTTCTTCATACAGTTTCGATCTGGAATGAAGAGATTGAGGGTGATGAAATCAGGTCCATGGTCCTTTGATAGGTCACTCATAGTACTAAAGTCGTTGAAG
GAGAATGATCAGATTCGTGATCTGGATTTTACTGCAGAGGCGTTTTTTATCCAGGTTCATAAAGTCCCGGTCAACTGTATGACTGTTGATATGGAAAAACTGATTGGGGA
GGACGTGGGAATTTTGGAGGAGGTGGATTGTGACGAGGTGAGCAATTGGTCGGGGCCGGTGATGAGAATTTGGGTGGTGGTGGACATAATGAAACCACTTCAGAGGGGGC
CAAAATTAGAGTGA
Protein sequenceShow/hide protein sequence
MDELVERWKRWALTEKEMKVIEAVNDNVLFSAEDIGLCLVARVILSKQVNCDAFRSVMKGAWRAHHGTRVESADNNIFFIQFRSGMKRLRVMKSGPWSFDRSLIVLKSLK
ENDQIRDLDFTAEAFFIQVHKVPVNCMTVDMEKLIGEDVGILEEVDCDEVSNWSGPVMRIWVVVDIMKPLQRGPKLE