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Lag0028931 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028931
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr8:33050211..33050624
RNA-Seq ExpressionLag0028931
SyntenyLag0028931
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143319.1 uncharacterized protein LOC111013220 [Momordica charantia]7.3e-0829.41Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG----------------------------------------------PIFNLLKEVRDKVGWGKF
        WWK  W++ +P+KIK+F WR CLDRLPT  NL+ RG                                               + +LL++    + W  F
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG----------------------------------------------PIFNLLKEVRDKVGWGKF

Query:  ELFVVVLWDVWNCRNQRKF
        E  VV LW +W+ RN + F
Subjt:  ELFVVVLWDVWNCRNQRKF

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.1e-1134.31Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------------------------PIFNLLKEVRDKVGWGKFELFVVVL
        WW G WK+ IPNKIK+FLWRLCLDRLPT  NL  RG                                         F +L+E  + +    FE   VV+
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------------------------PIFNLLKEVRDKVGWGKFELFVVVL

Query:  WDVWNCRNQRKFK---------GIGSVEWVGSYISSF
        W +WN RN R F          G+  VEW   Y   F
Subjt:  WDVWNCRNQRKFK---------GIGSVEWVGSYISSF

XP_030930993.1 uncharacterized protein LOC115956857 [Quercus lobata]6.2e-0731.45Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG--------------------------------PIFNLLK-------EVRDKVGW-----GKFEL
        +WK  WK+ IPNKIK+FLWR+C + LPT++NL  R                                 P F+ ++       +V++ + W      K EL
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG--------------------------------PIFNLLK-------EVRDKVGW-----GKFEL

Query:  FVVVLWDVWNCRNQRKF--KGIGS
        F VV W +WN RN+ +   KG+ S
Subjt:  FVVVLWDVWNCRNQRKF--KGIGS

XP_030939701.1 uncharacterized protein LOC115964553 [Quercus lobata]3.6e-0745.59Show/hide
Query:  WKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRGPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRN
        WK  W + +PNK+K  LWR C D LPT  NL+ R  + + L E+  K    + EL +VVLW++W CRN
Subjt:  WKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRGPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRN

XP_041009359.1 uncharacterized protein LOC121253410 [Juglans microcarpa x Juglans regia]8.9e-0636Show/hide
Query:  WKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR--GPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFK
        WK  W + +P KIKIF W+ C + LPT  NLV R  G +   +  ++ K    + E+F ++ W  W+ RN   F+
Subjt:  WKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR--GPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFK

TrEMBL top hitse value%identityAlignment
A0A2N9G559 Uncharacterized protein4.3e-0637.21Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR-GPIFNLLKEVRDKVG--WGKFEL--------FVVVLWDVWNCRNQRKFKG
        +W+  W + +P K + FLWRLC + LPT DNL  R   +  L  + RD +   WG +E         F ++ W +WN RN   FKG
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR-GPIFNLLKEVRDKVG--WGKFEL--------FVVVLWDVWNCRNQRKFKG

A0A6J1CNZ5 uncharacterized protein LOC1110132203.5e-0829.41Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG----------------------------------------------PIFNLLKEVRDKVGWGKF
        WWK  W++ +P+KIK+F WR CLDRLPT  NL+ RG                                               + +LL++    + W  F
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG----------------------------------------------PIFNLLKEVRDKVGWGKF

Query:  ELFVVVLWDVWNCRNQRKF
        E  VV LW +W+ RN + F
Subjt:  ELFVVVLWDVWNCRNQRKF

A0A6J1DAR4 uncharacterized protein LOC1110189545.3e-1234.31Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------------------------PIFNLLKEVRDKVGWGKFELFVVVL
        WW G WK+ IPNKIK+FLWRLCLDRLPT  NL  RG                                         F +L+E  + +    FE   VV+
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------------------------PIFNLLKEVRDKVGWGKFELFVVVL

Query:  WDVWNCRNQRKFK---------GIGSVEWVGSYISSF
        W +WN RN R F          G+  VEW   Y   F
Subjt:  WDVWNCRNQRKFK---------GIGSVEWVGSYISSF

A0A803PLN3 Uncharacterized protein3.0e-0729.59Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR-----------GPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFK-----GIGSVEWV
        WWK  W + +P ++K+F WR+C + LP   NL +R           G +F++L  +++++   +FE  + ++W +W  RN+   K     GI  +EW+
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYR-----------GPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFK-----GIGSVEWV

A0A803Q0L5 Uncharacterized protein4.6e-0831.3Show/hide
Query:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------PIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFKGIG--
        WWK  W+  IP KIK F+W+L  + LPT   L  RG                      + + L  +  +   GKFE F+V+ W++WN RN     GI   
Subjt:  WWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRG---------------------PIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFKGIG--

Query:  ---SVEWVGSYISSF
            V+W   Y++ F
Subjt:  ---SVEWVGSYISSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTGGAAGGGGTGTTGGAAAATAGTGATTCCGAATAAGATAAAGATCTTCTTATGGAGACTATGTTTAGACCGTCTGCCTACAGTTGATAATCTGGTTTATCG
GGGGCCTATTTTCAATCTCCTCAAAGAAGTGAGGGATAAGGTGGGATGGGGAAAATTTGAGTTGTTTGTGGTGGTGTTGTGGGATGTGTGGAATTGTCGTAACCAGCGAA
AATTCAAGGGGATTGGGTCTGTGGAGTGGGTGGGGAGTTACATCTCTTCGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTGGAAGGGGTGTTGGAAAATAGTGATTCCGAATAAGATAAAGATCTTCTTATGGAGACTATGTTTAGACCGTCTGCCTACAGTTGATAATCTGGTTTATCG
GGGGCCTATTTTCAATCTCCTCAAAGAAGTGAGGGATAAGGTGGGATGGGGAAAATTTGAGTTGTTTGTGGTGGTGTTGTGGGATGTGTGGAATTGTCGTAACCAGCGAA
AATTCAAGGGGATTGGGTCTGTGGAGTGGGTGGGGAGTTACATCTCTTCGTTCTAG
Protein sequenceShow/hide protein sequence
MGWWKGCWKIVIPNKIKIFLWRLCLDRLPTVDNLVYRGPIFNLLKEVRDKVGWGKFELFVVVLWDVWNCRNQRKFKGIGSVEWVGSYISSF