; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028934 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028934
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr8:33138433..33138849
RNA-Seq ExpressionLag0028934
SyntenyLag0028934
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601837.1 hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4175Show/hide
Query:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY
        MLP  SL FL  L LISPSS++AA RRLDDT  PADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+D +CPPPP  +F Y
Subjt:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY

Query:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL
        ITGPPG+LYPID++YNAA RR  SA+A+AVVGLA+ G+L+
Subjt:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL

KAG7032543.1 hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4175.71Show/hide
Query:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY
        MLP  SL FL  L LISPSS++AA RRLDDT  PADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+D +CPPPP  +F Y
Subjt:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY

Query:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL
        ITGPPG+LYPID++YNAA RR  SA+A+AVVGLA+AG+L+
Subjt:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL

XP_004150475.1 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]1.5e-4177.14Show/hide
Query:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF
        MLPLK L FL FL LISPSSA  +   RRLDDT  P DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K   NCPPPP  SF
Subjt:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF

Query:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL
         YITGPPG+LYPID+ YNAAGRR  SAA VVG+ LAGLLL
Subjt:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]1.6e-4379.29Show/hide
Query:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF
        MLPLK L FL FL LISPSSA  +A  RRLDDT  P DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K + NCPPPP  SF
Subjt:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF

Query:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL
         YITGPPG+LYPID+NYNAAGRRSA+AAA VG+ LAGLLL
Subjt:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL

XP_023520933.1 extensin [Cucurbita pepo subsp. pepo]1.5e-4174.47Show/hide
Query:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFT
        MLP  SL FLT L LISPSS++AA RRLDDT  P DPTVKC+PCEQNPPS  PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK++ +CPPPP  +F 
Subjt:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFT

Query:  YITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL
        YITGPPG+LYPID+NYNAA RR  SA+A+AV+GLA+AG+L+
Subjt:  YITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein7.4e-4277.14Show/hide
Query:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF
        MLPLK L FL FL LISPSSA  +   RRLDDT  P DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K   NCPPPP  SF
Subjt:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF

Query:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL
         YITGPPG+LYPID+ YNAAGRR  SAA VVG+ LAGLLL
Subjt:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL

A0A1S3CT22 extensin-like7.9e-4479.29Show/hide
Query:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF
        MLPLK L FL FL LISPSSA  +A  RRLDDT  P DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K + NCPPPP  SF
Subjt:  MLPLKSLFFLTFLFLISPSSA--AAAARRLDDTADPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSF

Query:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL
         YITGPPG+LYPID+NYNAAGRRSA+AAA VG+ LAGLLL
Subjt:  TYITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLLL

A0A6J1DDL2 acrosin3.2e-3770.95Show/hide
Query:  MLPLKSLFFLTFLFLISPS---SAAAAARRLDDT----ADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPP
        MLPLKSL FL  L LISPS   +A+AAAR LD+     +   DPTVKCAPC+QNPPS PPPP+YPSPPPPSPPPPDVLPYYSPPPPKK   K++ NCPPP
Subjt:  MLPLKSLFFLTFLFLISPS---SAAAAARRLDDT----ADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPP

Query:  P-PSSFTYITGPPGELYPIDENYNAAGR--RSASAAAVVGLALAGLLL
        P P SFTYITGPPG+LYPID++YNAA R   SA+AAAVVGL L GL +
Subjt:  P-PSSFTYITGPPGELYPIDENYNAAGR--RSASAAAVVGLALAGLLL

A0A6J1GMY1 extensin1.6e-4175Show/hide
Query:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY
        MLP  SL FL  L LISPSS++AA RRLDDT  PADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+D +CPPPP  +F Y
Subjt:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTY

Query:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL
        ITGPPG+LYPID++YNAA RR  S +A+AVVGLA+AG+L+
Subjt:  ITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL

A0A6J1JNW0 leucine-rich repeat extensin-like protein 32.2e-4174.83Show/hide
Query:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDT---ADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSS
        MLP  SL FLT L LISPSS++AA RRLDDT   A PADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK++ +CPPPP  +
Subjt:  MLPLKSLFFLTFLFLISPSSAAAAARRLDDT---ADPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSS

Query:  FTYITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL
        F YITGPPG+LYPID+NYNAA RR  SA+A+AV+GLA+AG+L+
Subjt:  FTYITGPPGELYPIDENYNAAGRR--SASAAAVVGLALAGLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein2.2e-0650Show/hide
Query:  ADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTYI-TGPPGELYPIDENYNAA
        A+  V C PC QN P PPP   P    PSPPPP      SPPPPKK         PPPPP    Y+ T PPG+LYPI+  Y AA
Subjt:  ADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTYI-TGPPGELYPIDENYNAA

AT1G23040.1 hydroxyproline-rich glycoprotein family protein6.9e-1651.24Show/hide
Query:  SPSSAAAAARRLDDTADPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTYITGPPGELYPIDENYN
        S S A+  AR+LD+     DP +KC+P C QNPP P PP  PSPPPP+ PPP  LP   PPPPKK      + CPPPPP++F YITGPPG LYP+DE + 
Subjt:  SPSSAAAAARRLDDTADPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTYITGPPGELYPIDENYN

Query:  AAGRRSASAAAVVGLALAGLL
        AA  +S     + GL   G++
Subjt:  AAGRRSASAAAVVGLALAGLL

AT1G70990.1 proline-rich family protein7.9e-1247.1Show/hide
Query:  LKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQN--PPSPPPPVYPSPPPPS---PPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFT
        L ++ FLTF  +I+ +S ++  R+L++     DP +KC PC QN  PPSPPP   PSPPPPS   PPPP  LP   P PPKK      + C PPPPS++ 
Subjt:  LKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQN--PPSPPPPVYPSPPPPS---PPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFT

Query:  YITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLL
        Y+TGPPGELYPID+ + AA  +S +   + GL   G++
Subjt:  YITGPPGELYPIDENYNAAGRRSASAAAVVGLALAGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAAATCCCTCTTCTTTCTCACTTTCCTCTTCCTAATTTCCCCCTCCTCCGCCGCCGCCGCCGCTCGCCGTCTCGACGACACCGCCGACCCCGCCGACCC
CACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCCCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCACCGCCCGACGTCCTCCCCTACTACT
CTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACGACACCAACTGTCCCCCGCCACCGCCGTCGTCCTTCACCTACATAACCGGCCCTCCCGGCGAACTCTATCCCATC
GACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCTCCGCCGCCGCCGTGGTTGGGTTGGCTCTGGCTGGGCTTCTGCTGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTCTCAAATCCCTCTTCTTTCTCACTTTCCTCTTCCTAATTTCCCCCTCCTCCGCCGCCGCCGCCGCTCGCCGTCTCGACGACACCGCCGACCCCGCCGACCC
CACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCCCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCACCGCCCGACGTCCTCCCCTACTACT
CTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACGACACCAACTGTCCCCCGCCACCGCCGTCGTCCTTCACCTACATAACCGGCCCTCCCGGCGAACTCTATCCCATC
GACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCTCCGCCGCCGCCGTGGTTGGGTTGGCTCTGGCTGGGCTTCTGCTGGGTTAA
Protein sequenceShow/hide protein sequence
MLPLKSLFFLTFLFLISPSSAAAAARRLDDTADPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDDTNCPPPPPSSFTYITGPPGELYPI
DENYNAAGRRSASAAAVVGLALAGLLLG