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Lag0028939 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028939
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:33202889..33203266
RNA-Seq ExpressionLag0028939
SyntenyLag0028939
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.2e-3054.87Show/hide
Query:  PNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRCLIREIHRAMAR
        P   +     I ++L V    C  QYLGLP+FMP NR     +IKDRVWK +QGWK K F +GGKEVL+K++ QAIPCYTM+ FRLP+ LIRE H   AR
Subjt:  PNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRCLIREIHRAMAR

Query:  FWWNGSEEVNRIH
        FWW  S+E  +IH
Subjt:  FWWNGSEEVNRIH

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]1.1e-2744.8Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        ++N +K V++FSPN    +Q +  H+L +P  PCH++YLGLPSF   +++     I D++WK +  WK + F +GGKEVLLK++VQAIP Y M+ FRLP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I   M+ FWW  +   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]2.1e-2644.8Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        ++N +KSV++FSPN  E  +     +L +P C CH+ YLGLP++   ++S     IK+R+WK +  W  K F +GGKEVLLK++VQAIP Y M+ FRL  
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
           ++I   MARFWW  S +  +IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]1.3e-2645.97Show/hide
Query:  INYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRC
        +N +K V++FSPN  +  Q Y   +L +P  PCH++YLGLPSF   +++     I D++WK +  WK + F  GGKEVLLK++VQAIP Y M+ FRLP  
Subjt:  INYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRC

Query:  LIREIHRAMARFWWNGSEEVNRIH
        L  +I   MA FWW  +   N IH
Subjt:  LIREIHRAMARFWWNGSEEVNRIH

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]1.0e-2848.8Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        M+N EKSV++FSPN     Q +  H+L +P  PCH+QYLGLPSF   ++S     I D++WK +  W+ + F +GGKEVLLK++VQAIP Y M+ F+LP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I + M+RFWW  S   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189542.0e-3054.87Show/hide
Query:  PNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRCLIREIHRAMAR
        P   +     I ++L V    C  QYLGLP+FMP NR     +IKDRVWK +QGWK K F +GGKEVL+K++ QAIPCYTM+ FRLP+ LIRE H   AR
Subjt:  PNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRCLIREIHRAMAR

Query:  FWWNGSEEVNRIH
        FWW  S+E  +IH
Subjt:  FWWNGSEEVNRIH

A0A803PXR5 Uncharacterized protein2.7e-2747.2Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        +IN++K V++FSPN     Q +  H+L +P  PCH++YLGLPSF   ++S     I DR+WK +  W+ + F +GGKEV LK++VQAIP Y M+ F+LP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I + MARFWW  S   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

A0A803Q6Z2 Uncharacterized protein5.0e-2948.8Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        M+N EKSV++FSPN     Q +  H+L +P  PCH+QYLGLPSF   ++S     I D++WK +  W+ + F +GGKEVLLK++VQAIP Y M+ F+LP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I + M+RFWW  S   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

A0A803QJN9 Uncharacterized protein5.5e-2844.8Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        ++N +K V++FSPN    +Q +  H+L +P  PCH++YLGLPSF   +++     I D++WK +  WK + F +GGKEVLLK++VQAIP Y M+ FRLP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I   M+ FWW  +   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

A0A803QK36 Uncharacterized protein1.1e-2848Show/hide
Query:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR
        ++N EKSV++FSPN     Q +  H+L +P  PCH+QYLGLPSF   ++S     I D++WK +  W+ + F +GGKEVLLK++VQAIP Y M+ F+LP 
Subjt:  MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPR

Query:  CLIREIHRAMARFWWNGSEEVNRIH
         L  +I + M+RFWW  S   N IH
Subjt:  CLIREIHRAMARFWWNGSEEVNRIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.3e-0438.46Show/hide
Query:  AIPCYTMNFFRLPRCLIREIHRAMARFWWNGSEEVNRIH
        A+P YTM  F LP+ + ++I   +A FWW   +E   +H
Subjt:  AIPCYTMNFFRLPRCLIREIHRAMARFWWNGSEEVNRIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAATTATGAGAAGTCAGTGGTTGCTTTCAGTCCGAACGCTGGGGAGGACTCACAACAGTATATCAGTCATGTGCTCTTGGTACCTCGGTGTCCATGCCATCAACA
ATACCTTGGGCTCCCCTCATTCATGCCTAGTAATCGCTCGGGGACGTTGAAGTTTATTAAGGACCGTGTCTGGAAGCAGATCCAGGGTTGGAAGGGAAAGTTCTTTTTCT
TGGGGGGTAAGGAAGTCCTTCTAAAGTCGATTGTTCAAGCCATCCCTTGCTACACGATGAATTTTTTTCGCCTGCCCCGGTGTCTGATTAGAGAAATCCATCGGGCCATG
GCCAGGTTCTGGTGGAATGGTTCTGAGGAGGTGAATAGGATTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAATTATGAGAAGTCAGTGGTTGCTTTCAGTCCGAACGCTGGGGAGGACTCACAACAGTATATCAGTCATGTGCTCTTGGTACCTCGGTGTCCATGCCATCAACA
ATACCTTGGGCTCCCCTCATTCATGCCTAGTAATCGCTCGGGGACGTTGAAGTTTATTAAGGACCGTGTCTGGAAGCAGATCCAGGGTTGGAAGGGAAAGTTCTTTTTCT
TGGGGGGTAAGGAAGTCCTTCTAAAGTCGATTGTTCAAGCCATCCCTTGCTACACGATGAATTTTTTTCGCCTGCCCCGGTGTCTGATTAGAGAAATCCATCGGGCCATG
GCCAGGTTCTGGTGGAATGGTTCTGAGGAGGTGAATAGGATTCACTAG
Protein sequenceShow/hide protein sequence
MINYEKSVVAFSPNAGEDSQQYISHVLLVPRCPCHQQYLGLPSFMPSNRSGTLKFIKDRVWKQIQGWKGKFFFLGGKEVLLKSIVQAIPCYTMNFFRLPRCLIREIHRAM
ARFWWNGSEEVNRIH