CuGenDBv2

Gene ID	Lag0028948
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	EAF domain-containing protein
Genome location	chr8:33284014..33286986
RNA-Seq Expression	Lag0028948
Synteny	Lag0028948
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579241.1 Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-156

87.97

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA VA     A+ST+AS  HSLT PEPRLSPP AKV KPMHMGR S P+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+D GFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

XP_022151706.1 ELL-associated factor 1 [Momordica charantia]

2.8e-140

82.34

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MAN+NKEEP+TAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAV  LRHVRQ  ES          A  S T SVPHSLTVPEPRLSPPVAKV KPMHMGRSS P VPVEVERIDIGEPGNTGA  VAASK +AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA
        Y+SDPPNVSAPSP P   NDDEHQDIDID+IFGSVSSDDGNNVEEEK+DVGFDINVPH NDTDDEIADVDDSGDEA+KGPNAAE                
Subjt:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA

Query:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
          ALRAQVNAEGRD QTSSSSSSESGSGSSSGSSSGSSDS+ SDEDSVTSI
Subjt:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

2.1e-156

88.25

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA VA    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR S P+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+D GFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

2.5e-157

88.54

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AAGVA    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR S P+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+D GFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

1.2e-156

86.87

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAA---------GVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKF
        RLERLHRAVKQLRH+RQPGESAAA         GVAA    + S  AS  HSLT PEPRLSPPVAKVAKPMHMGR S P +PVEVERIDIGEPGNTGAK 
Subjt:  RLERLHRAVKQLRHVRQPGESAAA---------GVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKF

Query:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ
        V ASKGLADYSSDPPNVSA SPG KNDDEHQDIDIDD+FGSV SDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+
Subjt:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ

Query:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        GRE P AA ALRAQV+AEGRDDQ+SSSSSS SGSGSSSGSSSGSSDS+GSDEDSVTSI
Subjt:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

9.6e-139

80.85

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEP+TAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVT------PAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAA
        RLERLHRAV QLRH+RQPGESAAA  A  T      PAAA TTASV HSLT PEPRLSPPV KV+KPMHMGRSS P +PVEVERIDIGEPGN GAK V A
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVT------PAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAA

Query:  SKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGRE
        SKGL +YSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVSSDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAE            
Subjt:  SKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGRE

Query:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
              ALRAQVNAEGR +Q+SSSSSS SGSGSSSGSSS SSDS+ SDEDSVTSI
Subjt:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

5.7e-139

79.05

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEP+TAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAA---------VTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKF
        RLERLHRAV QLRH+RQPGESAAA   A           PAA  ++ASV HSLT PEPRLSPPV KVAKPMHMGRSS P +PVEVERIDIGEPGN GAK 
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAA---------VTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKF

Query:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ
        V ASKGL DYSSDPPN S  SPG KNDDEHQDIDIDDIFGSVSSDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAE         
Subjt:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ

Query:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
                 ALRAQVNAEGR +Q+SSSSSS SGSGSSSGSSS SSDS+GSDEDSVTSI
Subjt:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

A0A6J1DE82 ELL-associated factor 1

1.3e-140

82.34

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MAN+NKEEP+TAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAV  LRHVRQ  ES          A  S T SVPHSLTVPEPRLSPPVAKV KPMHMGRSS P VPVEVERIDIGEPGNTGA  VAASK +AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA
        Y+SDPPNVSAPSP P   NDDEHQDIDID+IFGSVSSDDGNNVEEEK+DVGFDINVPH NDTDDEIADVDDSGDEA+KGPNAAE                
Subjt:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA

Query:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
          ALRAQVNAEGRD QTSSSSSSESGSGSSSGSSSGSSDS+ SDEDSVTSI
Subjt:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

1.0e-156

88.25

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA VA    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR S P+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+D GFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

1.2e-157

88.54

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AAGVA    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR S P+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+D GFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

1.9e-70

52.53

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        M+N++++EP TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK + GS+ K K+NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE F
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD
        RLERLHRAV QLRHVR PGESAAA  +AV          V H L+        PV + AK   + RS +P VPVEVERI+IG+P N+             
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLAD

Query:  YSSDPPNVSAPSP-GPKND--DEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAQGRE
          ++  NV A SP   KND  DEHQ+ID+ +IFGS + ++ +N E+E  D G  +   ++  + T++EIADV DDSG E EKG NAAEALRAQVNA+ ++
Subjt:  YSSDPPNVSAPSP-GPKND--DEHQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAQGRE

Query:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGS-DEDSVTSI
        +  ++ +  +  ++    D  S S SS SGSG  S S S S  S GS DED V S+
Subjt:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

9.5e-46

41.21

Show/hide

Query:  NNNKEEPRTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDG
        +N+ EEP+ AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID TKPG L K+K+N+VT+EFQNNQL KP V F G SEDY  ++ DA+LFFDG
Subjt:  NNNKEEPRTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDG

Query:  ETFRLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKG
        E FRLE+LHR+VK+L+ +R P ESA+A    VT                   ++ PPV K               PV++  IDI  P             
Subjt:  ETFRLERLHRAVKQLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKG

Query:  LADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVG---FDINVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGR
                             D  +D++I+D       ++   +  ++   G    DIN+PH  +  DDEIA VD + DE+ KG NAAEALRAQVNA+ R
Subjt:  LADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDVG---FDINVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGR

Query:  EAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDG
        E     ++ ++  +  GR+ ++S S    SGSGSSS S S  S S+G
Subjt:  EAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDG

Sequences

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CDS sequence

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ATGGCGAACAACAACAAAGAAGAGCCGAGGACCGCGCCCCAGCCCGATCGGTGGTATAATCTCTCTCTTGGTCCTTCCTTCAAGGATGAATCCTCCAACAAATTCTGCAC
TCTTCGATATGAATTTAAACCGGCGTCGATCGATAAAACGAAGCCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTGGGGA
AACCCAATGTGGCGTTTGTTGGCAGTAGTGAGGATTATAAGGAAAACGATGCCGTTTTGTTTTTTGACGGCGAGACTTTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAG
CAGCTTCGCCACGTTCGACAGCCGGGCGAATCCGCTGCTGCTGGCGTTGCCGCCGTCACCCCCGCCGCCGCGTCCACCACCGCTTCTGTCCCTCATTCTTTGACGGTGCC
GGAGCCTCGGTTATCTCCTCCAGTGGCTAAAGTTGCCAAACCTATGCATATGGGTCGGAGCAGTATTCCGGCAGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGC
CAGGAAATACAGGTGCAAAATTTGTTGCTGCTAGTAAAGGGCTTGCTGATTACTCATCAGACCCACCAAATGTGTCTGCTCCCTCTCCGGGCCCGAAGAATGATGATGAG
CATCAAGACATAGATATTGATGATATTTTTGGGTCTGTTTCATCTGATGATGGAAATAATGTCGAAGAAGAAAAACTTGACGTTGGATTCGATATAAATGTACCACATCA
GAACGATACTGACGATGAGATTGCTGATGTGGATGATAGTGGGGACGAAGCTGAGAAGGGACCTAATGCTGCTGAAGCCCTCAGAGCTCAGGTTAATGCACAGGGCAGGG
AGGCACCTAATGCTGCAGATGCCCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGACGACCAGACTTCAAGTTCTAGCAGCAGCGAATCGGGCAGTGGCAGCAGCAGCGGA
AGTAGCAGTGGCAGCAGTGACAGTGATGGTAGCGATGAGGATTCAGTTACGTCGATCTGA

mRNA sequence

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Protein sequence

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MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVK
QLRHVRQPGESAAAGVAAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSIPAVPVEVERIDIGEPGNTGAKFVAASKGLADYSSDPPNVSAPSPGPKNDDE
HQDIDIDDIFGSVSSDDGNNVEEEKLDVGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSG
SSSGSSDSDGSDEDSVTSI

Lag0028948 (gene) of Sponge gourd (AG-4) v1 genome