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Lag0028956 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028956
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:33390645..33391196
RNA-Seq ExpressionLag0028956
SyntenyLag0028956
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG73339.1 hypothetical protein EZV62_001918 [Acer yangbiense]4.1e-2635.75Show/hide
Query:  EDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFDK
        +++ D ++   + E++G V++  ++E+    +D+D CLV KV++ KK N +AF+S++  +W        E   +N+F   F  + ++ RV    PW F K
Subjt:  EDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFDK

Query:  SLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        SLIV+  PK       + FN+ AFWVQ+H+ P+ CM   MAK + E  G V  I  D K  W G  MRV++ +DI+ PL
Subjt:  SLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]9.4e-3941.67Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++++ D W+ +K T  E + V     +   + +++ LC+V K+ +SK+ + +A +SVM+SVWRVH++TRFE  G N++ + FK+  EK+RV+SS PW F+
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        KSL+V+  P   +Q +DM FN  AFW+Q+HN+P  C++ EMA  +G   G VE I+ D    W+GP +RVR+++D++ PL
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.9e-3240.88Show/hide
Query:  IEDLVDRWKTWKLT-EKEGKVVDAIDSE-VFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWP
        ++++ + W+ + LT EKE  ++  IDSE    + E++    V K+ +SK+ + +AF+SVM+S+W+VH +T  E+AG N++ + FK+  EK RV++S PW 
Subjt:  IEDLVDRWKTWKLT-EKEGKVVDAIDSE-VFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWP

Query:  FDKSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSP
        F+ SL+V+  P   DQ  DM FN  A W+Q+H +P  CM  +MAK +G   G VE ID +    W+GP +RVR+++DI+ P
Subjt:  FDKSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSP

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]5.2e-2935.56Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++D+   W+ + L ++E   +   + +   + ++I LC V K+  SK+   +AF SVM+ VW++H++TR E+AG N++ + FKT  EK RV S  PW FD
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        KSL++++     ++ +D+  +  AFWVQ+H +   CMT +MAK +G   G VE +D      W  P + VR+++++  PL
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]9.8e-2839.74Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++++ + W+ + LT +E +     + +   + E+I LC V K+ +SK+ +  A  SVM+ VW++H +TR E+AG N++ + FKT +EK RV+SS PW FD
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGID
        KSL V++ P   D+ +D+ F   AFWVQ+H +P   +T +MAK +G+  G VE +D
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGID

TrEMBL top hitse value%identityAlignment
A0A5C7IW83 CCHC-type domain-containing protein2.0e-2635.75Show/hide
Query:  EDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFDK
        +++ D ++   + E++G V++  ++E+    +D+D CLV KV++ KK N +AF+S++  +W        E   +N+F   F  + ++ RV    PW F K
Subjt:  EDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFDK

Query:  SLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        SLIV+  PK       + FN+ AFWVQ+H+ P+ CM   MAK + E  G V  I  D K  W G  MRV++ +DI+ PL
Subjt:  SLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

A0A6J1D765 uncharacterized protein LOC1110179024.6e-3941.67Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++++ D W+ +K T  E + V     +   + +++ LC+V K+ +SK+ + +A +SVM+SVWRVH++TRFE  G N++ + FK+  EK+RV+SS PW F+
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        KSL+V+  P   +Q +DM FN  AFW+Q+HN+P  C++ EMA  +G   G VE I+ D    W+GP +RVR+++D++ PL
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

A0A6J1DP89 uncharacterized protein LOC1110229321.4e-3240.88Show/hide
Query:  IEDLVDRWKTWKLT-EKEGKVVDAIDSE-VFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWP
        ++++ + W+ + LT EKE  ++  IDSE    + E++    V K+ +SK+ + +AF+SVM+S+W+VH +T  E+AG N++ + FK+  EK RV++S PW 
Subjt:  IEDLVDRWKTWKLT-EKEGKVVDAIDSE-VFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWP

Query:  FDKSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSP
        F+ SL+V+  P   DQ  DM FN  A W+Q+H +P  CM  +MAK +G   G VE ID +    W+GP +RVR+++DI+ P
Subjt:  FDKSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSP

A0A6J1DVS4 uncharacterized protein LOC1110235552.5e-2935.56Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++D+   W+ + L ++E   +   + +   + ++I LC V K+  SK+   +AF SVM+ VW++H++TR E+AG N++ + FKT  EK RV S  PW FD
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL
        KSL++++     ++ +D+  +  AFWVQ+H +   CMT +MAK +G   G VE +D      W  P + VR+++++  PL
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL

A0A6J1DYG3 uncharacterized protein LOC1110246764.7e-2839.74Show/hide
Query:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD
        ++++ + W+ + LT +E +     + +   + E+I LC V K+ +SK+ +  A  SVM+ VW++H +TR E+AG N++ + FKT +EK RV+SS PW FD
Subjt:  IEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFD

Query:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGID
        KSL V++ P   D+ +D+ F   AFWVQ+H +P   +T +MAK +G+  G VE +D
Subjt:  KSLIVMILPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAATTGAAGACCTTGTTGATCGATGGAAGACGTGGAAATTAACAGAGAAGGAAGGGAAGGTTGTGGACGCGATAGACAGTGAAGTGTTTTTTTCGAATGAGGA
TATTGATCTGTGCTTAGTCACAAAAGTGGTATCTAGCAAAAAGGCGAATTGTGATGCTTTTAAGTCTGTTATGAGGTCAGTTTGGAGGGTGCACCATAACACAAGGTTTG
AGTCTGCTGGGAATAATGTTTTCTTTGTCCAGTTTAAGACTAAAATGGAAAAGGCAAGGGTTGTTAGTTCAGACCCTTGGCCTTTCGATAAATCACTTATAGTGATGATA
TTGCCAAAGGAAAACGATCAGATTATTGATATGAAATTCAACGAGGAGGCTTTCTGGGTGCAGGTCCATAATGTGCCAGTGAACTGTATGACTGTTGAGATGGCCAAACG
AGTAGGGGAGGTTGCGGGGGTTGTGGAAGGGATAGACTGGGATGAGAAGAGTAGGTGGTCTGGCCCTGTGATGAGAGTACGGCTGAGAGTGGATATAACTAGCCCTCTGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAATTGAAGACCTTGTTGATCGATGGAAGACGTGGAAATTAACAGAGAAGGAAGGGAAGGTTGTGGACGCGATAGACAGTGAAGTGTTTTTTTCGAATGAGGA
TATTGATCTGTGCTTAGTCACAAAAGTGGTATCTAGCAAAAAGGCGAATTGTGATGCTTTTAAGTCTGTTATGAGGTCAGTTTGGAGGGTGCACCATAACACAAGGTTTG
AGTCTGCTGGGAATAATGTTTTCTTTGTCCAGTTTAAGACTAAAATGGAAAAGGCAAGGGTTGTTAGTTCAGACCCTTGGCCTTTCGATAAATCACTTATAGTGATGATA
TTGCCAAAGGAAAACGATCAGATTATTGATATGAAATTCAACGAGGAGGCTTTCTGGGTGCAGGTCCATAATGTGCCAGTGAACTGTATGACTGTTGAGATGGCCAAACG
AGTAGGGGAGGTTGCGGGGGTTGTGGAAGGGATAGACTGGGATGAGAAGAGTAGGTGGTCTGGCCCTGTGATGAGAGTACGGCTGAGAGTGGATATAACTAGCCCTCTGT
AG
Protein sequenceShow/hide protein sequence
MAKIEDLVDRWKTWKLTEKEGKVVDAIDSEVFFSNEDIDLCLVTKVVSSKKANCDAFKSVMRSVWRVHHNTRFESAGNNVFFVQFKTKMEKARVVSSDPWPFDKSLIVMI
LPKENDQIIDMKFNEEAFWVQVHNVPVNCMTVEMAKRVGEVAGVVEGIDWDEKSRWSGPVMRVRLRVDITSPL