; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028989 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028989
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein SKIP28
Genome locationchr8:33869359..33870827
RNA-Seq ExpressionLag0028989
SyntenyLag0028989
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579265.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]4.0e-13376.8Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LH+VVE NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK +LL NRS+Q  Q+QQQ++ L +HE+I+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLL +EY  MIDV+MCPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CNRPYC RH 
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV VSS+AAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

XP_022939676.1 F-box protein SKIP28 [Cucurbita moschata]4.4e-13276.8Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LHEVVE NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK +LL NRSQQ  Q+QQQ++ L +HE+I+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLL ++Y  MIDV+MCPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CNRPYC RH 
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV  SSSAAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

XP_022973574.1 F-box protein SKIP28 [Cucurbita maxima]5.8e-13276.49Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP + I AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LHEVV+ NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK YLL NRSQQ  Q+QQQ+Q  LYH+ I+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLL +E   MIDV+MCPKC ++GRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVC   LC+SCWLQLPKCN CN+PYC RHR
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV  SSSAAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

XP_023551551.1 F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]3.1e-13376.8Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL E+LSM AVCVSLRDAVE DVLPWLH+ VD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LHEVVE NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK +LL N SQQ  Q+QQQ+Q  LYH+YI+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
         KLL +EY  MIDV+MCPKC +IG+VYDCSRERCKIKQE+   A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CNRPYC RHR
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV VSSSAAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]5.4e-13879.62Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSENQEP NPA  AGSS P +RIEAGPPHEALF VLSYLPL ELLSMS+VCVSLRDAVE DVLPWLHIVVD  LS RLSD  L RIARKA GRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDSG HEVVEKNPLLTKLYVPGC+SLTPGGVVRAVKTLSQHSHNLKSLMI GIY I+ NEHLEVLKC+LL NRS  L Q+++++Q  LY E+IDR
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLLS+E+QP+IDVQ+CPKC++I  VYDCSRERCKIKQE++L ADCRGC  C+ RCEECGGCVDDDE EEAVCA  LCSSCWLQLPKCN CNRPYC RH 
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         N  VSSS  GFVCE+CLE
Subjt:  DNVTVSSSAAGFVCEVCLE

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein3.5e-12774.61Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSENQEPPNPA  A         EAGPPHEALF V++YLPL ELLS+SAVCVSLRDAVE DVLPWLHIVVD  LS RLSD  L RIARKA GRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDSGLHEVVE NPLLTKLYVPGC+SLTP GVVRAVKTLSQ SHNLK+LMI GIY I+ N+HLEVL+ +LL NRS    Q+ +Q    LYHE++DR
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
         +LLS ++ P+IDVQ+CPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RCEECGGCVDDDE EEA+C+  LCSSCW QLPKCN CNRPYCKRHR
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
        DN  VSSS AGFVCE+CLE
Subjt:  DNVTVSSSAAGFVCEVCLE

A0A5A7TYB5 F-box protein SKIP28 isoform X13.9e-12674.61Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSENQEPPNPA  A         EAGPPHEALF V+SYL L ELLSMSAVCVSLRDAVE DVLPWLHIVVD  LS RLSD  L RIARKA GRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        +C KISDSGLHEVVE NPLLTKLYVPGC+SLTP GVVRAVKT SQHSHNLK+LMI GIY I+N+ HLEVL+ +LL NRSQ   Q+ +Q    LYHE++DR
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
          LLS+++ P+IDVQ+CPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RCEECGGCVD DE EEA+C   +CSSCWLQLPKCN CNRPYCKRHR
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
        DN  VSSS AGFVCE+CLE
Subjt:  DNVTVSSSAAGFVCEVCLE

A0A6J1CZ11 F-box protein SKIP282.1e-12472.12Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MS NQE PNPA         + I+AGPPH+A F VLSYLPL ELLSMSAVCVSLRDAVERD+LPW HI+VD  LS RLSD+IL+RI RKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
         C KISDSGLH+VV +NPLL KLYVPGC+ LTP GVVRAVKTLSQHSHNLKS+MI GIY I+ NEHLEVL+ +L INRSQ     QQQ+Q LL HEYIDR
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVD--DDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKR
        SKLLSDEYQPMIDVQ+CPKCN+I RVYDCSRE CKIKQE+KLQADCR C+ C+ RCEECGGCVD  D E EEAVCA +LC+SCWL+LPKCN CN+PYC R
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVD--DDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKR

Query:  HR---------DNVTVSSSAAGFVCEVCLE
                    +  V +SA GFVCEVCLE
Subjt:  HR---------DNVTVSSSAAGFVCEVCLE

A0A6J1FGL5 F-box protein SKIP282.1e-13276.8Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LHEVVE NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK +LL NRSQQ  Q+QQQ++ L +HE+I+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLL ++Y  MIDV+MCPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CNRPYC RH 
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV  SSSAAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

A0A6J1IEZ1 F-box protein SKIP282.8e-13276.49Show/hide
Query:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP + I AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR
        NC KISDS LHEVV+ NPLLTKLYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK YLL NRSQQ  Q+QQQ+Q  LYH+ I+ 
Subjt:  NCCKISDSGLHEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDR

Query:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR
        SKLL +E   MIDV+MCPKC ++GRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVC   LC+SCWLQLPKCN CN+PYC RHR
Subjt:  SKLLSDEYQPMIDVQMCPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHR

Query:  DNVTVSSSAAGFVCEVCLE
         NV  SSSAAGFVCEVC+E
Subjt:  DNVTVSSSAAGFVCEVCLE

SwissProt top hitse value%identityAlignment
Q9LK24 F-box protein At3g272902.5e-2933.59Show/hide
Query:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLY
        G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLY

Query:  VPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDI
        V GC  L+  G+V  ++ L S +   +KSL+  G       +  E+    LL+    ++  ++++K+   ++        L D+   + D+++CP C   
Subjt:  VPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDI

Query:  GRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC
          V+DC  + C +K Q    ++ CR C +C+ RC ECG C++D E  +  C    C  C
Subjt:  GRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC

Q9LU91 F-box protein SKIP142.7e-3935Show/hide
Query:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPGC
        H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  +A G ++ L +++CC+I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPGC

Query:  SSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY
        + +T  G++  ++ L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH        +S +    +D++MCPKC +   VY
Subjt:  SSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY

Query:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK
        DC  E CK K  +K   +CR CSLC+ RC  CG C+ D E EE  C   LC+ C    PK
Subjt:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK

Q9ZU90 F-box protein SKIP286.5e-5439.46Show/hide
Query:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPG
        HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPG

Query:  CSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY
        CS LTP G++  V++LS+++H L++L I+G+      +HL  L  YL                                  +  ID+++CPKC+++  + 
Subjt:  CSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY

Query:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAAGFVCEVC
         CSRE C  KQ +     CRGC LC+ RC EC  C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S   F CE C
Subjt:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAAGFVCEVC

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein4.7e-5539.46Show/hide
Query:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPG
        HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPG

Query:  CSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY
        CS LTP G++  V++LS+++H L++L I+G+      +HL  L  YL                                  +  ID+++CPKC+++  + 
Subjt:  CSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY

Query:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAAGFVCEVC
         CSRE C  KQ +     CRGC LC+ RC EC  C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S   F CE C
Subjt:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAAGFVCEVC

AT3G26000.1 Ribonuclease inhibitor1.9e-4035Show/hide
Query:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPGC
        H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  +A G ++ L +++CC+I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLYVPGC

Query:  SSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY
        + +T  G++  ++ L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH        +S +    +D++MCPKC +   VY
Subjt:  SSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDIGRVY

Query:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK
        DC  E CK K  +K   +CR CSLC+ RC  CG C+ D E EE  C   LC+ C    PK
Subjt:  DCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein1.8e-3033.59Show/hide
Query:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLY
        G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGLHEVVEKNPLLTKLY

Query:  VPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDI
        V GC  L+  G+V  ++ L S +   +KSL+  G       +  E+    LL+    ++  ++++K+   ++        L D+   + D+++CP C   
Subjt:  VPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKCNDI

Query:  GRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC
          V+DC  + C +K Q    ++ CR C +C+ RC ECG C++D E  +  C    C  C
Subjt:  GRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCACCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTGTACTGAG
TTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCTGCCCT
TGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACTCTGGCTTTGATCAACTGTTGCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGGTTAGAGCAGTGAAGACTCTATCTCAACATTC
TCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAACAATGAACACCTTGAAGTCCTCAAATGCTATCTTCTCATCAACCGATCACAACAGCTACCGC
AGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCCAATGATTGATGTACAAATGTGCCCAAAATGC
AATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCCGGGGTTGCAGCCTTTGCGTTACAAGGTGTGA
AGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACGAATGTAATAGGC
CATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGGGTACATTTGGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCACCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTGTACTGAG
TTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCTGCCCT
TGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACTCTGGCTTTGATCAACTGTTGCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGGTTAGAGCAGTGAAGACTCTATCTCAACATTC
TCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAACAATGAACACCTTGAAGTCCTCAAATGCTATCTTCTCATCAACCGATCACAACAGCTACCGC
AGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCCAATGATTGATGTACAAATGTGCCCAAAATGC
AATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCCGGGGTTGCAGCCTTTGCGTTACAAGGTGTGA
AGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACGAATGTAATAGGC
CATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGGGTACATTTGGTGTTGA
Protein sequenceShow/hide protein sequence
MSENQEPPNPAVTAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCCKISDSGL
HEVVEKNPLLTKLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCYLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQMCPKC
NDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLEGYIWC