; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028990 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028990
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynein light chain
Genome locationchr8:33873324..33875840
RNA-Seq ExpressionLag0028990
SyntenyLag0028990
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]4.9e-4997.17Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]1.7e-4996.23Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERRSKFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]8.4e-4996.23Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]3.8e-4997.17Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERRSKFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]2.2e-4997.17Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFL+GLILKKKA EQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain2.4e-4997.17Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

A0A1S3CSY6 Dynein light chain2.4e-4997.17Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

A0A6J1CWZ8 Dynein light chain8.2e-5096.23Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERRSKFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

A0A6J1FHG9 Dynein light chain4.1e-4996.23Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

A0A6J1I7W2 Dynein light chain7.0e-4995.28Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERRSKFLNGLILKKKA E QE RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HSLGGF
Subjt:  HSLGGF

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm4.7e-1044.93Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        ++ +DMP  +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

Q22799 Dynein light chain 1, cytoplasmic4.0e-0943.48Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

Q24117 Dynein light chain 1, cytoplasmic5.2e-0943.48Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

Q6BZF8 Dynein light chain 1, cytoplasmic4.0e-0947.83Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        ++ASD+P  +Q R F  + E + +   K++ K +A  LKKE D  YG  WH IVG SFGSYVTH  G F
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

Q86A88 Dynein light chain, cytoplasmic3.0e-0942.25Show/hide
Query:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        + V+ +DMP  +Q  A  C  +  +    + D   +A+ +KKEFD  Y P WHCIVG SFGS+VTH    F
Subjt:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein9.6e-4378.3Show/hide
Query:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEG E+ELERRSKFLN LI KKKA EQQ+Q+D  NVRVRASDMP P QNRAFS +RE+L++ PGK D+KRLA ALKK+FDS+YGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGF
        HS GGF
Subjt:  HSLGGF

AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.7e-1044.93Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        V  SDMP  +Q +A + A + LD +    D K +A  +KKEFD  YG  W C+VG++FG + THS G F
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

AT3G16120.1 Dynein light chain type 1 family protein2.2e-1044.29Show/hide
Query:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        +V  +DMP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG + THS G F
Subjt:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF

AT4G27360.1 Dynein light chain type 1 family protein7.0e-0943.66Show/hide
Query:  SDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFFRAPV
        +DM   ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F    V
Subjt:  SDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFFRAPV

AT5G20110.1 Dynein light chain type 1 family protein2.0e-1961.33Show/hide
Query:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF
        + L VR+ A+DMP  +Q  AF CAR  LDS+  K  SK +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F
Subjt:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAGCAAGTTTCTGAACGGACTGATTCTTAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGTGATCGTCTCAATGTCCG
CGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTCG
CCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTCACACATTCTCTGGGTGGCTTCTTTCGAGCCCCT
GTCTCGTGGAACATCGTTAAAAGATTAAGTTTCTCAATCCGAAACGAGGATCGAACACGCATCGATTTGATCGTAAAATCAACAGCTGCTGAAGTCATGAGCAAGAACGG
CCAGTCTAACAGCAAGGATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAGCAAGTTTCTGAACGGACTGATTCTTAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGTGATCGTCTCAATGTCCG
CGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTCG
CCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTCACACATTCTCTGGGTGGCTTCTTTCGAGCCCCT
GTCTCGTGGAACATCGTTAAAAGATTAAGTTTCTCAATCCGAAACGAGGATCGAACACGCATCGATTTGATCGTAAAATCAACAGCTGCTGAAGTCATGAGCAAGAACGG
CCAGTCTAACAGCAAGGATTTGTGA
Protein sequenceShow/hide protein sequence
MEGAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFFRAP
VSWNIVKRLSFSIRNEDRTRIDLIVKSTAAEVMSKNGQSNSKDL