CuGenDBv2

Gene ID	Lag0028998
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	chr8:33980789..33981339
RNA-Seq Expression	Lag0028998
Synteny	Lag0028998
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

2.8e-32

55.09

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGT+KKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKI-SMTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAEAKSLKESERLEKEI EVQ+M +KI +MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKI-SMTPDEYFEKHANLRNKLDDDIRNRLLG

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

7.5e-33

55.69

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEF+TL +AF+E +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAEAKSLKESERLEKE+VEVQ+M +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

2.2e-32

55.69

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAE KSLKESERLEKEIVEVQ++ +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

9.8e-33

56.29

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAE KSLKESERLEKEIVEVQ+M +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

XP_038893313.1 ATP synthase subunit d, mitochondrial [Benincasa hispida]

2.8e-32

55.69

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGT+KKV NVA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAE KSLKESERLEKEIVEVQ+M +KIS MT DEYF KH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

1.4e-32

55.09

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGT+KKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKI-SMTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAEAKSLKESERLEKEI EVQ+M +KI +MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKI-SMTPDEYFEKHANLRNKLDDDIRNRLLG

A0A5D2IY04 ATP synthase subunit d, mitochondrial

4.0e-32

62.04

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------TVTLQYKPKFDALHVELKEAEAKSLKESERLEKEIVE
        MSG  KKV +VA KA KNIDW+G+AKLLVS++ARKEF+TL + F+E +               T+T QYKPKFDAL VELKEAE KSLKESERLEKEI E
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------TVTLQYKPKFDALHVELKEAEAKSLKESERLEKEIVE

Query:  VQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        VQ++ +KIS MT DEYFEKH  L+ K DD+IRN   G
Subjt:  VQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

3.6e-33

55.69

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEF+TL +AF+E +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAEAKSLKESERLEKE+VEVQ+M +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

A0A6J1G072 ATP synthase subunit d, mitochondrial

2.4e-32

55.09

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFD+L VELKEAE KSLKESERLEKEIVEVQ++ +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

1.1e-32

55.69

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK
        MSGTVKKV +VA KA KNIDWDG+AKLLVS++ARKEFS+L +AFEE +                                             TVT QYK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETH---------------------------------------------TVTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG
        PKFDAL VELKEAE KSLKESERLEKEIVEVQ++ +KIS MT DEYFEKH  LR K DD+IRN   G
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRNRLLG

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

3.1e-29

47.85

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHT---------------------------------------------VTLQYK
        MSG  KK+ +VA KA + IDWDG+AK+LV+++AR+EFS L +AF+E +T                                             VT +YK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHT---------------------------------------------VTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI +VQ++++K+S MT DEYFEKH  L+ K DD+IRN
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRN

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

2.2e-30

47.85

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHT---------------------------------------------VTLQYK
        MSG  KK+ +VA KA + IDWDG+AK+LV+++AR+EFS L +AF+E +T                                             VT +YK
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHT---------------------------------------------VTLQYK

Query:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI +VQ++++K+S MT DEYFEKH  L+ K DD+IRN
Subjt:  PKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKIS-MTPDEYFEKHANLRNKLDDDIRN

AT3G52300.2 ATP synthase D chain, mitochondrial

2.5e-10

53.45

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Query:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHTVTLQYKPKF
        MSG  KK+ +VA KA + IDWDG+AK+LV+++AR+EFS L +AF+E +T   Q + KF
Subjt:  MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHTVTLQYKPKF

Sequences

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CDS sequence

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ATGAGCGGAACCGTTAAGAAAGTCCCCAATGTTGCCTCCAAAGCATTCAAGAACATCGATTGGGATGGCATAGCAAAGCTTTTGGTCTCCAATCAGGCTCGCAAGGAGTT
CTCAACCCTTCACCAAGCCTTCGAGGAGACACACACAGTGACTCTGCAGTACAAACCTAAATTCGATGCGTTGCATGTAGAATTGAAGGAAGCTGAAGCGAAATCCCTAA
AGGAGTCTGAGCGGTTGGAAAAGGAGATTGTTGAAGTTCAAAAAATGAACGAAAAGATCAGCATGACTCCTGATGAATACTTCGAGAAGCATGCTAATCTGAGGAATAAA
TTGGATGACGACATCCGAAACAGACTACTGGGGCTATTGATTGCAAATTACTGGTTGAAGCACCAAAGTTTCACAATTTAA

mRNA sequence

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Protein sequence

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MSGTVKKVPNVASKAFKNIDWDGIAKLLVSNQARKEFSTLHQAFEETHTVTLQYKPKFDALHVELKEAEAKSLKESERLEKEIVEVQKMNEKISMTPDEYFEKHANLRNK
LDDDIRNRLLGLLIANYWLKHQSFTI

Lag0028998 (gene) of Sponge gourd (AG-4) v1 genome