; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029000 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029000
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHMG-Y-related protein A
Genome locationchr8:34008625..34009272
RNA-Seq ExpressionLag0029000
SyntenyLag0029000
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150116.1 HMG-Y-related protein A [Cucumis sativus]6.1e-9496.24Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AID+LNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTSAP  AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

XP_008466945.1 PREDICTED: HMG-Y-related protein A [Cucumis melo]4.7e-9496.77Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AID+LNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTSAP  AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

XP_022938491.1 HMG-Y-related protein A [Cucurbita moschata]1.8e-9093.01Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        M T+DQLNNPPQPPPPAPSLPHYPEMIMTAI+ALNDKNGVSK+AITKQIESTYGDLPPAFTTLL HHLDVMKQTG+LLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKK S+GSGRPRGRPPK PKPAPTSAP  AGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

XP_022953026.1 HMG-Y-related protein B-like [Cucurbita moschata]3.7e-9194.62Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AIDALNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTS PVA+ PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

XP_038906720.1 HMG-Y-related protein A-like [Benincasa hispida]2.0e-9296.24Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMTAI++LNDKNGVSKSAITKQIESTYGDLPPAF+TLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK + GSGRPRGRPPKYPKPAPTSAPV AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

TrEMBL top hitse value%identityAlignment
A0A0A0KPG4 H15 domain-containing protein3.0e-9496.24Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AID+LNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTSAP  AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

A0A1S3CSD8 HMG-Y-related protein A2.3e-9496.77Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AID+LNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTSAP  AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

A0A5D3E3W3 HMG-Y-related protein A2.3e-9496.77Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AID+LNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTSAP  AGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

A0A6J1GLV6 HMG-Y-related protein B-like1.8e-9194.62Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AIDALNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTS PVA+ PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

A0A6J1JSA2 HMG-Y-related protein B-like1.8e-9194.62Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AIDALNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTS PVA+ PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A9.0e-4861.96Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT++   N PQ      SLP YPEMI+  ++ALN+ NG +KSAI+K IE+TYG+LP A  T+L  HL+ MK +G+L F +NNYMK DPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPV
        PKPK PLPPGTVVSPPRPRGRP  PKDP AP   PK K + GSGRPRGRP K P+    +AP A    R RGRPPKVKP +  V
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPV

Q10370 HMG-Y-related protein B (Fragment)1.2e-3962.5Show/hide
Query:  ALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI
        ALN+ +G +KSAI+K IE+TYG+LP    T+L  HL+ MK++G+L F +NNYMK DPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRP  PKDP AP 
Subjt:  ALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI

Query:  SQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPV
          PK K +  +GRPRGRP K  +     +P A    R RGRPPKVKP +  V
Subjt:  SQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPV

Q43386 HMG-Y-related protein A2.4e-4560.85Show/hide
Query:  PAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AI++LNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ VKNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+       AP  A  A G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGPPRGRGRPPKVKP-AVAPVGC

Q9FYS5 HMG-Y-related protein A2.1e-3350.76Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPD-PNAPPKRGRGR
        MATD+     P PP        YPEMI+ AI+ L+DK+G +KSAI+K IE  YG LPPA  +LLT HL  MK++G+L+F+KNNY +   P+APPKRGRGR
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPD-PNAPPKRGRGR

Query:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGP-----PRGRGRPPKVKPAV
        PPK   P  P P P +  S  R RGRPPK K   +P+    K+ ++G  +PRGRPPK  K      P+P+ AP  AG       RGRGRPPKV+PAV
Subjt:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGP-----PRGRGRPPKVKPAV

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A1.7e-4660.85Show/hide
Query:  PAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AI++LNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ VKNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+       AP  A  A G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPK------PAPTSAPVAAGPPRGRGRPPKVKP-AVAPVGC

AT1G48620.1 high mobility group A52.6e-1034.13Show/hide
Query:  ATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP-
        A   Q    P PP P+ S P Y +MI TAI ALN+ +G SK AI++ IE  Y  +P A   LLTHHL  +K +G L+ VK +Y       PP      P 
Subjt:  ATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP-

Query:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFA---PISQPK------KKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKV
                      P P   L   T  +  R RGRPPK K       P++  K      + P S     + +PP+ P           G PR  G  P V
Subjt:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFA---PISQPK------KKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKV

Query:  KPAVAPVG
        KPA +  G
Subjt:  KPAVAPVG

AT3G18035.1 winged-helix DNA-binding transcription factor family protein9.0e-1135.47Show/hide
Query:  PQPP----PPAPSLPH--YPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPP--------KRG
        PQP      P  S+PH  Y EMI  AI ALN+ +G SK AI++ IE  Y  L  A   LLTHHL  +K +G L  VK +Y     + PP           
Subjt:  PQPP----PPAPSLPH--YPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPP--------KRG

Query:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPFAPISQPKKKPSS---GSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPK---VKPAV
        +G   P+ ++       P+  G+   P  R RGRPPKPK    P    +  P++    +G+P     +   P P   PV     RG GRP K     PA 
Subjt:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPFAPISQPKKKPSS---GSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPK---VKPAV

Query:  APV
        AP+
Subjt:  APV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGACGACCAACTCAACAACCCCCCTCAGCCTCCTCCTCCGGCTCCCTCTCTCCCTCACTACCCCGAGATGATTATGACGGCGATCGACGCTCTCAACGACAA
AAACGGAGTCAGCAAATCGGCGATTACGAAGCAAATCGAGTCCACATACGGCGATCTACCCCCAGCTTTCACTACGCTCCTCACCCACCACTTAGACGTCATGAAGCAAA
CCGGCCAACTCCTCTTCGTCAAAAACAACTACATGAAGCCCGATCCCAACGCGCCGCCGAAGCGTGGCCGTGGCCGCCCTCCCAAGCCCAAAGTCCCTCTCCCGCCGGGC
ACCGTCGTGTCTCCGCCGCGCCCACGTGGGCGACCCCCGAAACCCAAAGATCCATTCGCCCCCATTTCGCAGCCCAAGAAGAAACCCTCCTCGGGAAGTGGAAGGCCACG
TGGCCGCCCTCCGAAGTACCCGAAACCGGCGCCGACGTCGGCTCCGGTCGCCGCAGGTCCGCCCCGAGGCAGAGGGCGGCCGCCGAAGGTAAAGCCGGCCGTCGCCCCGG
TTGGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGACGACCAACTCAACAACCCCCCTCAGCCTCCTCCTCCGGCTCCCTCTCTCCCTCACTACCCCGAGATGATTATGACGGCGATCGACGCTCTCAACGACAA
AAACGGAGTCAGCAAATCGGCGATTACGAAGCAAATCGAGTCCACATACGGCGATCTACCCCCAGCTTTCACTACGCTCCTCACCCACCACTTAGACGTCATGAAGCAAA
CCGGCCAACTCCTCTTCGTCAAAAACAACTACATGAAGCCCGATCCCAACGCGCCGCCGAAGCGTGGCCGTGGCCGCCCTCCCAAGCCCAAAGTCCCTCTCCCGCCGGGC
ACCGTCGTGTCTCCGCCGCGCCCACGTGGGCGACCCCCGAAACCCAAAGATCCATTCGCCCCCATTTCGCAGCCCAAGAAGAAACCCTCCTCGGGAAGTGGAAGGCCACG
TGGCCGCCCTCCGAAGTACCCGAAACCGGCGCCGACGTCGGCTCCGGTCGCCGCAGGTCCGCCCCGAGGCAGAGGGCGGCCGCCGAAGGTAAAGCCGGCCGTCGCCCCGG
TTGGGTGCTGA
Protein sequenceShow/hide protein sequence
MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIDALNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPG
TVVSPPRPRGRPPKPKDPFAPISQPKKKPSSGSGRPRGRPPKYPKPAPTSAPVAAGPPRGRGRPPKVKPAVAPVGC