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Lag0029005 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029005
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate receptor
Genome locationchr8:34137141..34140058
RNA-Seq ExpressionLag0029005
SyntenyLag0029005
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum]6.1e-0742.86Show/hide
Query:  AVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELG
        A +SP  + L ++++VKLD  NYP W  +VL ++RG K+DGY+LGT E P +F+T+  + +K   +P+ G
Subjt:  AVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELG

KGN65642.1 hypothetical protein Csa_019906 [Cucumis sativus]2.6e-1351.95Show/hide
Query:  EISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTN
        E +++T I   S+ I     A+++ FGHPL T L++KLDDK +  W GMVL VLRGQK+DGYVLG K QPP+ + +N
Subjt:  EISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTN

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]8.3e-1252.5Show/hide
Query:  MAKDEISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITT
        MA +  S ST   +    + +   A++  FGHPL T LTVKLDDKNY  W GMVL VL GQK+DGYVL TK  P ++ TT
Subjt:  MAKDEISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITT

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]1.4e-1446.36Show/hide
Query:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF
        +SS P   V+ + +  P      ++ FGHPLGTVLTVKLDDKNY  W GMVL VLRGQK DGYVLGT  +PP+F+ +    +  G S  L   Q N +  
Subjt:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF

Query:  DSRAIEDAMI
        + +A++ A++
Subjt:  DSRAIEDAMI

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]1.4e-1446.36Show/hide
Query:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF
        +SS P   V+ + +  P      ++ FGHPLGTVLTVKLDDKNY  W GMVL VLRGQK DGYVLGT  +PP+F+ +    +  G S  L   Q N +  
Subjt:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF

Query:  DSRAIEDAMI
        + +A++ A++
Subjt:  DSRAIEDAMI

TrEMBL top hitse value%identityAlignment
A0A0A0LXU0 Uncharacterized protein1.2e-1351.95Show/hide
Query:  EISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTN
        E +++T I   S+ I     A+++ FGHPL T L++KLDDK +  W GMVL VLRGQK+DGYVLG K QPP+ + +N
Subjt:  EISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTN

A0A2Z6P4D5 Integrase catalytic domain-containing protein3.0e-0742.86Show/hide
Query:  AVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELG
        A +SP  + L ++++VKLD  NYP W  +VL ++RG K+DGY+LGT E P +F+T+  + +K   +P+ G
Subjt:  AVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELG

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like4.0e-1252.5Show/hide
Query:  MAKDEISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITT
        MA +  S ST   +    + +   A++  FGHPL T LTVKLDDKNY  W GMVL VL GQK+DGYVL TK  P ++ TT
Subjt:  MAKDEISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITT

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X26.6e-1546.36Show/hide
Query:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF
        +SS P   V+ + +  P      ++ FGHPLGTVLTVKLDDKNY  W GMVL VLRGQK DGYVLGT  +PP+F+ +    +  G S  L   Q N +  
Subjt:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF

Query:  DSRAIEDAMI
        + +A++ A++
Subjt:  DSRAIEDAMI

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X16.6e-1546.36Show/hide
Query:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF
        +SS P   V+ + +  P      ++ FGHPLGTVLTVKLDDKNY  W GMVL VLRGQK DGYVLGT  +PP+F+ +    +  G S  L   Q N +  
Subjt:  SSSTPIGTVSMIILTNP---IAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCF

Query:  DSRAIEDAMI
        + +A++ A++
Subjt:  DSRAIEDAMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGACGAGATTTCTTCATCAACGCCAATAGGCACTGTCTCTATGATCATCCTAACGAATCCCATAGCTGTGCATTCTCCTTTTGGCCACCCACTAGGCACAGT
TCTCACAGTTAAACTTGATGACAAAAATTATCCTCCCTGGAATGGTATGGTACTTGTTGTACTTCGAGGACAGAAGATTGATGGCTATGTTCTTGGAACAAAAGAACAAC
CACCTGAATTCATCACCACTAACCTGCAGTTGCAGAAGACTGGACGTAGTCCCGAGCTTGGGGCGAATCAGTATAACTTTCAGTGTTTTGATTCAAGGGCAATTGAGGAT
GCGATGATCAAGTTCAAGGTTTCATTGATGAAGTTTAAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTATCACCAATCGCCGACCAGCCCC
TCCCTCCAGACGCCATCTCCGCGCGACAGCAACGACGCAGCACCCCTCCACCGCCGTCGTCTCTCTCTCTCTGAAACCCACCTGTGAAACCCACGAAACCCACCTGCAAG
AAACCCACCCGCATCGACCCCTCTCTCCAGACGTATCTCCGGTGACAGCAACGTGCAGACGACGCAATACCCCTCCGCCGCCGCCGTCTCTCTCTGAAACCCACCTACGA
AACCCACGAAACTCCCCGCTGCACGAAACCCACTCGCGTCACTGTCGAACTTCACCGCTGCACCCTCGCACCAGCGTCGTCTCTCTCTCCCTCTTGCTCGTGATGGTCTC
CGACAACAAGAATGGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAGACGAGATTTCTTCATCAACGCCAATAGGCACTGTCTCTATGATCATCCTAACGAATCCCATAGCTGTGCATTCTCCTTTTGGCCACCCACTAGGCACAGT
TCTCACAGTTAAACTTGATGACAAAAATTATCCTCCCTGGAATGGTATGGTACTTGTTGTACTTCGAGGACAGAAGATTGATGGCTATGTTCTTGGAACAAAAGAACAAC
CACCTGAATTCATCACCACTAACCTGCAGTTGCAGAAGACTGGACGTAGTCCCGAGCTTGGGGCGAATCAGTATAACTTTCAGTGTTTTGATTCAAGGGCAATTGAGGAT
GCGATGATCAAGTTCAAGGTTTCATTGATGAAGTTTAAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTATCACCAATCGCCGACCAGCCCC
TCCCTCCAGACGCCATCTCCGCGCGACAGCAACGACGCAGCACCCCTCCACCGCCGTCGTCTCTCTCTCTCTGAAACCCACCTGTGAAACCCACGAAACCCACCTGCAAG
AAACCCACCCGCATCGACCCCTCTCTCCAGACGTATCTCCGGTGACAGCAACGTGCAGACGACGCAATACCCCTCCGCCGCCGCCGTCTCTCTCTGAAACCCACCTACGA
AACCCACGAAACTCCCCGCTGCACGAAACCCACTCGCGTCACTGTCGAACTTCACCGCTGCACCCTCGCACCAGCGTCGTCTCTCTCTCCCTCTTGCTCGTGATGGTCTC
CGACAACAAGAATGGGATCTGA
Protein sequenceShow/hide protein sequence
MAKDEISSSTPIGTVSMIILTNPIAVHSPFGHPLGTVLTVKLDDKNYPPWNGMVLVVLRGQKIDGYVLGTKEQPPEFITTNLQLQKTGRSPELGANQYNFQCFDSRAIED
AMIKFKVSLMKFKGKNTLLVPEVWVKLHFITNRRPAPPSRRHLRATATTQHPSTAVVSLSLKPTCETHETHLQETHPHRPLSPDVSPVTATCRRRNTPPPPPSLSETHLR
NPRNSPLHETHSRHCRTSPLHPRTSVVSLSLLLVMVSDNKNGI