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Lag0029009 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029009
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:34195106..34195623
RNA-Seq ExpressionLag0029009
SyntenyLag0029009
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU35627.1 hypothetical protein TSUD_30450 [Trifolium subterraneum]3.7e-1135.77Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD--SQCAYALADERDGSALGGKMV----LWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQL
        M  AWR      I+   +NLF  +F +K E   V  T   S   Y L   R  S +G K+V    ++ +  ++D + MG  LRIRV + + +P++RG +L
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD--SQCAYALADERDGSALGGKMV----LWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQL

Query:  QDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECGAV
           +GK+      YERLP+FC+ CG +GH  R+C  V
Subjt:  QDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECGAV

OMO64558.1 hypothetical protein CCACVL1_21676 [Corchorus capsularis]5.3e-1036.36Show/hide
Query:  WRAHGATRIETAGENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALG--------GKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQD
        W   G  +I+  G+ L   QF  + EK RV    S    AL     G+++G        G+ V W           GP LRIRV+LK+ +P+RRG  L  
Subjt:  WRAHGATRIETAGENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALG--------GKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQD

Query:  EEGKEFRCPVLYERLPDFCYECGCLGHSRREC
         +  +      YERLPDFCY CGCL +   EC
Subjt:  EEGKEFRCPVLYERLPDFCYECGCLGHSRREC

PPE01936.1 hypothetical protein GOBAR_DD01012 [Gossypium barbadense]1.8e-1037.82Show/hide
Query:  GENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALGGKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCY
        G+N  + +F      +RV S   +          G+A+G  M +   W  RDG W    +RI+V + + +P+RR  +L D EG E    + YERLPDFCY
Subjt:  GENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALGGKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCY

Query:  ECGCLGHSRRECGAVGEGV
         CG +GHS R C +  EGV
Subjt:  ECGCLGHSRRECGAVGEGV

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-1834.76Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD-------------------------SQCAYAL---------ADERDGSALGGKM--VLWRKW
        M++ WR H +TR E  G N++ I F+S  EK RV+S+                          + CA+ +               + LG K+  V   + 
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD-------------------------SQCAYAL---------ADERDGSALGGKM--VLWRKW

Query:  GLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRREC
           DG W GP +R+RV++ + +P+RRG +L++ +GK+  CP+ YE+LPDFCYECG +GHS REC
Subjt:  GLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRREC

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]5.3e-1833.33Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMST-----DSQCAYALADERDGSALGGKMVLWRKW------------------------------G
        M+  W+ H +TRIETAG N++ I F++  EK+RV S      D      +        L   + L   W                              G
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMST-----DSQCAYALADERDGSALGGKMVLWRKW------------------------------G

Query:  LRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRE
        +   DW+ P L +RV++ + +P+RRG +++  +GK+  CP+ YERLPDFCY CGC+GHS RE
Subjt:  LRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRE

TrEMBL top hitse value%identityAlignment
A0A1R3H2G0 Uncharacterized protein2.6e-1036.36Show/hide
Query:  WRAHGATRIETAGENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALG--------GKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQD
        W   G  +I+  G+ L   QF  + EK RV    S    AL     G+++G        G+ V W           GP LRIRV+LK+ +P+RRG  L  
Subjt:  WRAHGATRIETAGENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALG--------GKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQD

Query:  EEGKEFRCPVLYERLPDFCYECGCLGHSRREC
         +  +      YERLPDFCY CGCL +   EC
Subjt:  EEGKEFRCPVLYERLPDFCYECGCLGHSRREC

A0A2Z6NZM7 Uncharacterized protein1.8e-1135.77Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD--SQCAYALADERDGSALGGKMV----LWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQL
        M  AWR      I+   +NLF  +F +K E   V  T   S   Y L   R  S +G K+V    ++ +  ++D + MG  LRIRV + + +P++RG +L
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD--SQCAYALADERDGSALGGKMV----LWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQL

Query:  QDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECGAV
           +GK+      YERLP+FC+ CG +GH  R+C  V
Subjt:  QDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECGAV

A0A6J1D765 uncharacterized protein LOC1110179026.7e-1934.76Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD-------------------------SQCAYAL---------ADERDGSALGGKM--VLWRKW
        M++ WR H +TR E  G N++ I F+S  EK RV+S+                          + CA+ +               + LG K+  V   + 
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTD-------------------------SQCAYAL---------ADERDGSALGGKM--VLWRKW

Query:  GLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRREC
           DG W GP +R+RV++ + +P+RRG +L++ +GK+  CP+ YE+LPDFCYECG +GHS REC
Subjt:  GLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRREC

A0A6J1DVS4 uncharacterized protein LOC1110235552.6e-1833.33Show/hide
Query:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMST-----DSQCAYALADERDGSALGGKMVLWRKW------------------------------G
        M+  W+ H +TRIETAG N++ I F++  EK+RV S      D      +        L   + L   W                              G
Subjt:  MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMST-----DSQCAYALADERDGSALGGKMVLWRKW------------------------------G

Query:  LRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRE
        +   DW+ P L +RV++ + +P+RRG +++  +GK+  CP+ YERLPDFCY CGC+GHS RE
Subjt:  LRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRE

A0A7J9LZJ5 Uncharacterized protein9.8e-1042.5Show/hide
Query:  DGSALGGKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECG
        +GSA+G  + + R+   R+G W+   +R+RV+L + +P+RR   +   EG+E  C + YERLP FCY CGC+GH   +CG
Subjt:  DGSALGGKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYERLPDFCYECGCLGHSRRECG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACAGCGTGGAGAGCTCATGGGGCAACGCGCATTGAAACTGCGGGGGAGAATTTGTTTGCTATCCAATTTAGGTCCAAGGGGGAGAAGATGCGAGTGATGTCTAC
GGATTCACAATGTGCCTATGCGCTGGCAGACGAGAGAGATGGCTCAGCTTTGGGTGGTAAGATGGTACTGTGGAGGAAGTGGGGTTTGAGGGATGGTGACTGGATGGGTC
CGATTCTGCGAATACGGGTTCGTTTGAAGATGGATCGTCCGATGAGAAGAGGGTTTCAGCTGCAGGACGAGGAAGGTAAGGAATTTCGGTGTCCGGTTCTGTATGAACGT
CTGCCAGATTTCTGTTATGAATGTGGTTGTCTGGGGCACTCGAGGAGGGAGTGCGGGGCTGTGGGTGAAGGTGTGTCGGGCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGACAGCGTGGAGAGCTCATGGGGCAACGCGCATTGAAACTGCGGGGGAGAATTTGTTTGCTATCCAATTTAGGTCCAAGGGGGAGAAGATGCGAGTGATGTCTAC
GGATTCACAATGTGCCTATGCGCTGGCAGACGAGAGAGATGGCTCAGCTTTGGGTGGTAAGATGGTACTGTGGAGGAAGTGGGGTTTGAGGGATGGTGACTGGATGGGTC
CGATTCTGCGAATACGGGTTCGTTTGAAGATGGATCGTCCGATGAGAAGAGGGTTTCAGCTGCAGGACGAGGAAGGTAAGGAATTTCGGTGTCCGGTTCTGTATGAACGT
CTGCCAGATTTCTGTTATGAATGTGGTTGTCTGGGGCACTCGAGGAGGGAGTGCGGGGCTGTGGGTGAAGGTGTGTCGGGCAGCTAG
Protein sequenceShow/hide protein sequence
MRTAWRAHGATRIETAGENLFAIQFRSKGEKMRVMSTDSQCAYALADERDGSALGGKMVLWRKWGLRDGDWMGPILRIRVRLKMDRPMRRGFQLQDEEGKEFRCPVLYER
LPDFCYECGCLGHSRRECGAVGEGVSGS