CuGenDBv2

Gene ID	Lag0029031
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Proliferating cell nuclear antigen
Genome location	chr8:34447114..34448853
RNA-Seq Expression	Lag0029031
Synteny	Lag0029031
Gene Ontology terms	GO:0006272 - leading strand elongation (biological process) GO:0006275 - regulation of DNA replication (biological process) GO:0006298 - mismatch repair (biological process) GO:0019985 - translesion synthesis (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0043626 - PCNA complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0030337 - DNA polymerase processivity factor activity (molecular function)
InterPro domains	IPR022648 - Proliferating cell nuclear antigen, PCNA, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600018.1 Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

XP_022942180.1 proliferating cell nuclear antigen-like [Cucurbita moschata]

8.0e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

XP_022996079.1 proliferating cell nuclear antigen-like [Cucurbita maxima]

8.0e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

XP_023549127.1 proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo]

8.0e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

XP_038891866.1 proliferating cell nuclear antigen-like [Benincasa hispida]

1.0e-09

57.14

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DC+T +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSC4 Proliferating cell nuclear antigen

1.6e-08

45.88

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD-QMLEVCVTVLLEMVCLGIS
        MGMNLNNMAKMLRCAGNDDIV LKA+D +D +T +FENP + + +  +++   + +EHL + D + Q +     V    +C  +S
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD-QMLEVCVTVLLEMVCLGIS

A0A5D3BG12 Proliferating cell nuclear antigen

2.1e-08

45.88

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD-QMLEVCVTVLLEMVCLGIS
        MGMNLNNMAKMLRCAGNDDIV LKA+D +D +T +FENP + + +  +++   + +EHL + D + Q +     V    +C  +S
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD-QMLEVCVTVLLEMVCLGIS

A0A6J1DUY3 Proliferating cell nuclear antigen

1.5e-09

55.38

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD
        +GMNL NMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD

A0A6J1FVS4 Proliferating cell nuclear antigen

3.9e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

A0A6J1K7Q7 Proliferating cell nuclear antigen

3.9e-10

58.73

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNLNNMAKMLRCAGNDDIV LKA+D +DCIT +FENP + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

SwissProt top hits

e value

%identity

Alignment

O82134 Proliferating cell nuclear antigen

2.8e-10

52.54

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL
        MGMNLNNMAKML+CAGNDDI+ +KA+D +D +T +FE+P + + S  +++   + +EHL
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL

P17070 Proliferating cell nuclear antigen

1.3e-10

49.23

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD
        MGMNLNNMAKMLRCAGNDDI+ +KA+D +D +T +FE+P + + +  +++   + +EHL + D +
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD

P22177 Proliferating cell nuclear antigen (Fragment)

2.8e-10

52.54

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL
        MGMNLNNMAKML+CAGNDDI+ +KA+D +D +T +FE+P + + S  +++   + +EHL
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL

P24314 Proliferating cell nuclear antigen

1.7e-10

54.24

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL
        MGMNLNNMAKML+CAGNDDI+ LKA+D +D +T +FE+P + + S  +++   + +EHL
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHL

Q43266 Proliferating cell nuclear antigen

1.3e-10

49.23

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD
        MGMNLNNMAKMLRCAGNDDI+ +KA+D +D +T +FE+P + + +  +++   + +EHL + D +
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLNDDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G07370.1 proliferating cellular nuclear antigen 1

3.8e-10

46.03

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNL NM+KML+CAGNDDI+ +KA+D  D +T +FE+P + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

AT2G29570.1 proliferating cell nuclear antigen 2

2.9e-10

46.03

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Query:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND
        MGMNL NM+KML+CAGNDDI+ +KA+D +D +T +FE+P + + +  +++   + +EHL + D
Subjt:  MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSV-TEHLLLND

Sequences

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CDS sequence

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ATGGGTATGAACCTCAACAACATGGCTAAGATGCTCCGTTGCGCCGGCAACGATGACATTGTTATGCTGAAGGCTAATGATAGTAACGATTGCATCACATTAATTTTTGA
AAACCCTTGTGAGTGTAGGAAGTCTCTGGAAAAATTAAGGTCTCCTTCTGTGACTGAGCATTTGTTGTTAAACGACGATGATCAGATGCTTGAAGTTTGTGTTACAGTTC
TACTTGAGATGGTGTGTTTAGGAATAAGTAAGCAAATTTTCGACAGTAATAACTTTGTGTAG

mRNA sequence

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Protein sequence

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MGMNLNNMAKMLRCAGNDDIVMLKANDSNDCITLIFENPCECRKSLEKLRSPSVTEHLLLNDDDQMLEVCVTVLLEMVCLGISKQIFDSNNFV

Lag0029031 (gene) of Sponge gourd (AG-4) v1 genome