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Lag0029101 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029101
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionextensin-like
Genome locationchr8:35387968..35388282
RNA-Seq ExpressionLag0029101
SyntenyLag0029101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]1.3e-0853.33Show/hide
Query:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS
        MG     SY+FSLLIAF  L+LP+KLTAH I  S ST  Y Y  PP P    LP P P C QG+ P A KK+ KLK L  L P  P+  WP R     KS
Subjt:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

KAG6602173.1 hypothetical protein SDJN03_07406, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0851.38Show/hide
Query:  MGSLIFVSYVFSLLIAF-VSLDLPSKLTAHCIRPSPSTKPYEYQPP----PPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVA
        MGSL+  S++ SLLIAF +SL LPS+L A       +  PY+YQPP    PPPP  KL  P PP          K +YKL+SLLQ     IRPWP R  A
Subjt:  MGSLIFVSYVFSLLIAF-VSLDLPSKLTAHCIRPSPSTKPYEYQPP----PPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVA

Query:  ARKSPPPPF
         RKSPPPPF
Subjt:  ARKSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]1.8e-1052.25Show/hide
Query:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQ-GSAPAANKKKYKLKSLLQLPSRPIRPWPPRR
        MGSLI  S Y+FSLLIA +SLDLPSKL A  + PSP T P++YQPPPPP    PS+KLP P P  C+Q    P   K ++K K+     S P R  P +R
Subjt:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQ-GSAPAANKKKYKLKSLLQLPSRPIRPWPPRR

Query:  VAARKSPPPPF
             SPPPPF
Subjt:  VAARKSPPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]3.3e-1254.29Show/hide
Query:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVAARKS
        MGSLI  S Y+FSLLIA +SLDLPSKL A  + PSP T P+EYQPPPP PS KLP P P      AP   K ++K K+     S P R  P +R     S
Subjt:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVAARKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]2.5e-1254.55Show/hide
Query:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRV
        MGSLI  S Y+FSLLIA +SLDLPSKL A  + PSP T P++YQPPPPP    PS+KLP P P  C+Q + P   K ++K K     PS P  P P +R 
Subjt:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRV

Query:  AARKSPPPPF
           KSPPPPF
Subjt:  AARKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein2.8e-0955.24Show/hide
Query:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS
        MG     SY+FSLLIAF  L+LPSKLTAH I  S ST  YEY PPP P    L  P P C QG+ P A KK+ KLK L  L P  P   WP R     KS
Subjt:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

A0A5A7UW72 Uncharacterized protein6.2e-0953.33Show/hide
Query:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS
        MG     SY+FSLLIAF  L+LP+KLTAH I  S ST  Y Y  PP P    LP P P C QG+ P A KK+ KLK L  L P  P+  WP R     KS
Subjt:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQL-PSRPIRPWPPRRVAARKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

A0A5D3E2A1 Uncharacterized protein7.1e-0541.32Show/hide
Query:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPP-------------PPPPSRKLPDPAPPCSQ----GSAPAANKKKYKLKSLLQLPS
        MG +I  SY+F LL AF SL+LPSKLTAH I PS  TK  EY+PP             PPPP  K   P  P  +       P+  KK+YK K       
Subjt:  MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPP-------------PPPPSRKLPDPAPPCSQ----GSAPAANKKKYKLKSLLQLPS

Query:  RPIRPWPPRRVAARKSPPPPF
            P P ++    KSPP PF
Subjt:  RPIRPWPPRRVAARKSPPPPF

A0A6J1FFZ9 extensin-like8.7e-1152.25Show/hide
Query:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQ-GSAPAANKKKYKLKSLLQLPSRPIRPWPPRR
        MGSLI  S Y+FSLLIA +SLDLPSKL A  + PSP T P++YQPPPPP    PS+KLP P P  C+Q    P   K ++K K+     S P R  P +R
Subjt:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPP----PSRKLPDPAPP-CSQ-GSAPAANKKKYKLKSLLQLPSRPIRPWPPRR

Query:  VAARKSPPPPF
             SPPPPF
Subjt:  VAARKSPPPPF

A0A6J1JSJ5 extensin-like1.6e-1254.29Show/hide
Query:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVAARKS
        MGSLI  S Y+FSLLIA +SLDLPSKL A  + PSP T P+EYQPPPP PS KLP P P      AP   K ++K K+     S P R  P +R     S
Subjt:  MGSLIFVS-YVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVAARKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTCTAATATTTGTGTCCTATGTTTTCTCCCTTCTCATTGCGTTTGTTTCTTTAGATCTGCCTTCAAAATTGACTGCACATTGCATTCGCCCATCTCCATCCAC
CAAGCCTTATGAATACCAACCTCCGCCGCCGCCGCCGTCCAGAAAACTCCCGGATCCAGCTCCTCCCTGCAGCCAAGGCTCAGCACCGGCAGCCAACAAGAAGAAATACA
AATTGAAGTCACTGCTGCAGCTGCCAAGTAGGCCAATAAGACCATGGCCGCCAAGGAGGGTCGCGGCCCGTAAATCGCCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTCTAATATTTGTGTCCTATGTTTTCTCCCTTCTCATTGCGTTTGTTTCTTTAGATCTGCCTTCAAAATTGACTGCACATTGCATTCGCCCATCTCCATCCAC
CAAGCCTTATGAATACCAACCTCCGCCGCCGCCGCCGTCCAGAAAACTCCCGGATCCAGCTCCTCCCTGCAGCCAAGGCTCAGCACCGGCAGCCAACAAGAAGAAATACA
AATTGAAGTCACTGCTGCAGCTGCCAAGTAGGCCAATAAGACCATGGCCGCCAAGGAGGGTCGCGGCCCGTAAATCGCCTCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MGSLIFVSYVFSLLIAFVSLDLPSKLTAHCIRPSPSTKPYEYQPPPPPPSRKLPDPAPPCSQGSAPAANKKKYKLKSLLQLPSRPIRPWPPRRVAARKSPPPPF