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Lag0029102 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029102
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionextensin-like
Genome locationchr8:35399659..35399964
RNA-Seq ExpressionLag0029102
SyntenyLag0029102
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]3.5e-1159.79Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF
        ++FSLLIAF  L+LP+KLTA  + IH S STN + Y  PP P       PPPPICRQG PPPA K+ K K  P   PPPP F+WPRRF  KSPPPPF
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF

TYK29731.1 hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]5.1e-1047.01Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP-PSRKLSY--PPPPICRQGPPP--------------PAMKKYKFKSPPPPP-------
        ++F LL AF SL+LPSKLTA  + IHPS  T   EYKPPP P P    SY  PPPP  +  PPP              PA K+YKFK PPPP        
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP-PSRKLSY--PPPPICRQGPPP--------------PAMKKYKFKSPPPPP-------

Query:  --------------PPPKFQWPRRFNRKSPPPPF
                      PPPK+ WPR+FNR SPPPPF
Subjt:  --------------PPPKFQWPRRFNRKSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]4.4e-1457.14Show/hide
Query:  SVIFVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ--GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKS
        S  ++FSLLIA +SLDLPSKL A   S+HPSP TNPH+Y+PPP P    PS+KL YPPP +C Q   PPPP   ++KFK+ PP   PP   W R+F   S
Subjt:  SVIFVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ--GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]5.2e-1560.42Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPPF
        ++FSLLIA +SLDLPSKL A   S+HPSP TNPHEY+PPP  PS KL YPPP +C Q  PPP   ++KFK+ PP   PP   W R+F   SPPPPF
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]3.1e-1559.41Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ-GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPP
        ++FSLLIA +SLDLPSKL A   S+HPSP TNPH+Y+PPP P    PS+KL YPPP +C Q  PPPP   ++KFK  PP P P    W R+F  KSPPPP
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ-GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPP

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein9.6e-1563.92Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF
        ++FSLLIAF  L+LPSKLTA  + IH S STN +EY PPP P       PPPPICRQG PPPA K+ K K  P   PPPPKF+WPRRF  KSPPPPF
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF

A0A5A7UW72 Uncharacterized protein1.7e-1159.79Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF
        ++FSLLIAF  L+LP+KLTA  + IH S STN + Y  PP P       PPPPICRQG PPPA K+ K K  P   PPPP F+WPRRF  KSPPPPF
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKS-PPPPPPPPKFQWPRRFNRKSPPPPF

A0A5D3E2A1 Uncharacterized protein2.5e-1047.01Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP-PSRKLSY--PPPPICRQGPPP--------------PAMKKYKFKSPPPPP-------
        ++F LL AF SL+LPSKLTA  + IHPS  T   EYKPPP P P    SY  PPPP  +  PPP              PA K+YKFK PPPP        
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP-PSRKLSY--PPPPICRQGPPP--------------PAMKKYKFKSPPPPP-------

Query:  --------------PPPKFQWPRRFNRKSPPPPF
                      PPPK+ WPR+FNR SPPPPF
Subjt:  --------------PPPKFQWPRRFNRKSPPPPF

A0A6J1FFZ9 extensin-like2.1e-1457.14Show/hide
Query:  SVIFVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ--GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKS
        S  ++FSLLIA +SLDLPSKL A   S+HPSP TNPH+Y+PPP P    PS+KL YPPP +C Q   PPPP   ++KFK+ PP   PP   W R+F   S
Subjt:  SVIFVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSP----PSRKLSYPPPPICRQ--GPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

A0A6J1JSJ5 extensin-like2.5e-1560.42Show/hide
Query:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPPF
        ++FSLLIA +SLDLPSKL A   S+HPSP TNPHEY+PPP  PS KL YPPP +C Q  PPP   ++KFK+ PP   PP   W R+F   SPPPPF
Subjt:  FVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCAGTGATATTTGTTTTCTCCCTTCTCATTGCATTTGTCTCTTTAGATCTGCCTTCAAAATTAACTGCATTCTCCTACTCCATCCACCCATCTCCATCCACCAA
CCCTCATGAATACAAACCTCCGCCATCGCCGCCGTCTAGAAAACTCTCATATCCTCCTCCTCCGATCTGCAGGCAAGGCCCACCACCGCCAGCCATGAAGAAATACAAAT
TCAAGTCGCCGCCGCCGCCGCCACCACCGCCCAAGTTCCAATGGCCACGAAGGTTCAACCGTAAATCGCCTCCACCTCCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCAGTGATATTTGTTTTCTCCCTTCTCATTGCATTTGTCTCTTTAGATCTGCCTTCAAAATTAACTGCATTCTCCTACTCCATCCACCCATCTCCATCCACCAA
CCCTCATGAATACAAACCTCCGCCATCGCCGCCGTCTAGAAAACTCTCATATCCTCCTCCTCCGATCTGCAGGCAAGGCCCACCACCGCCAGCCATGAAGAAATACAAAT
TCAAGTCGCCGCCGCCGCCGCCACCACCGCCCAAGTTCCAATGGCCACGAAGGTTCAACCGTAAATCGCCTCCACCTCCTTTCTAG
Protein sequenceShow/hide protein sequence
MESVIFVFSLLIAFVSLDLPSKLTAFSYSIHPSPSTNPHEYKPPPSPPSRKLSYPPPPICRQGPPPPAMKKYKFKSPPPPPPPPKFQWPRRFNRKSPPPPF