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Lag0029103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionExtensin-3-like
Genome locationchr8:35402734..35403072
RNA-Seq ExpressionLag0029103
SyntenyLag0029103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058946.1 extensin-3-like [Cucumis melo var. makuwa]4.6e-0441.18Show/hide
Query:  LIFLNFPPNFAARYIHP---SPRSLPP-----------LSPPP----------PTT-------RPIVPYYPFKFPPPPSRKRPNPPPSYHV-----ITQQ
        L+  N P NFA  YI P   SP S+PP           + PPP          P++       RPIVPYYP+KF PPP RK  +PPP YHV     + QQ
Subjt:  LIFLNFPPNFAARYIHP---SPRSLPP-----------LSPPP----------PTT-------RPIVPYYPFKFPPPPSRKRPNPPPSYHV-----ITQQ

Query:  ------GSARRAAPPPPPK
                AR+AAP PPP+
Subjt:  ------GSARRAAPPPPPK

KAA0058948.1 extensin-3-like [Cucumis melo var. makuwa]1.5e-1053.33Show/hide
Query:  FPPNFAARYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK
        FPP F   +   +    PPL P     RPIVPYYP+KFPPPPSRK+ NPP SYH                   RRAAPPPPPKKPYQWPK
Subjt:  FPPNFAARYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK

KAE8647164.1 hypothetical protein Csa_018816, partial [Cucumis sativus]4.3e-1052.17Show/hide
Query:  FPPNFAARYIHPSPRSLPPLSPP--PPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK
        FP  F   + H     LPP SPP      RPIVPY+P+KFPPPPSRK+ NPPPSYH                   RRA PPPPP KPYQWPK
Subjt:  FPPNFAARYIHPSPRSLPPLSPP--PPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK

XP_008466986.1 PREDICTED: extensin-3-like, partial [Cucumis melo]5.8e-0742.54Show/hide
Query:  MGSHKPLFVFFL--LIALIFLNFPPNFAARYIHPSPRSLPPLS----------------------------PPP-----PTTRPIVPYYPFKFPPPPSRK
        M SH P+FVFFL  ++ L+ LN P NFAA YI  S  S PP+                             PPP        RPIVPYYP+KFPPPPSRK
Subjt:  MGSHKPLFVFFL--LIALIFLNFPPNFAARYIHPSPRSLPPLS----------------------------PPP-----PTTRPIVPYYPFKFPPPPSRK

Query:  RPNPPPSYHVITQQGSARRAAPPP----PPKKPY
        + NPP SYH          A PPP    P KK Y
Subjt:  RPNPPPSYHVITQQGSARRAAPPP----PPKKPY

XP_022141653.1 extensin-3-like [Momordica charantia]2.4e-0842.86Show/hide
Query:  PLFVFFLLIALIFLNFPPNFAA-RYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRK-------------------------RPNPPPSYHVITQQ
        P FV F L+AL+    P  FAA +YIHPSP SL P   P  T RPIVPYYPF FPPPP +K                         R  PPP YH     
Subjt:  PLFVFFLLIALIFLNFPPNFAA-RYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRK-------------------------RPNPPPSYHVITQQ

Query:  GSAR-------RAAPPPPPKKPYQWP
         +         +++PPPPPK+PYQWP
Subjt:  GSAR-------RAAPPPPPKKPYQWP

TrEMBL top hitse value%identityAlignment
A0A0A0KD80 Uncharacterized protein9.7e-1645.22Show/hide
Query:  MGSHKPLFVFFLLI--ALIFLNFPPNFAARYIHPSPRSLPPLSP---------------------------PPPT-------TRPIVPYYPFKFPPPPSR
        M S  P+FVFFL I  +L+ LN P N A   I PS    PPL P                           PPP+        RPIVPY+P+KFPPPPSR
Subjt:  MGSHKPLFVFFLLI--ALIFLNFPPNFAARYIHPSPRSLPPLSP---------------------------PPPT-------TRPIVPYYPFKFPPPPSR

Query:  KRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPKVTGRKSPPPPF
        K+ NPPPSYH                   RRA PPPPP KPYQWPK   RKSPPPPF
Subjt:  KRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPKVTGRKSPPPPF

A0A1S3CSG8 extensin-3-like2.8e-0742.54Show/hide
Query:  MGSHKPLFVFFL--LIALIFLNFPPNFAARYIHPSPRSLPPLS----------------------------PPP-----PTTRPIVPYYPFKFPPPPSRK
        M SH P+FVFFL  ++ L+ LN P NFAA YI  S  S PP+                             PPP        RPIVPYYP+KFPPPPSRK
Subjt:  MGSHKPLFVFFL--LIALIFLNFPPNFAARYIHPSPRSLPPLS----------------------------PPP-----PTTRPIVPYYPFKFPPPPSRK

Query:  RPNPPPSYHVITQQGSARRAAPPP----PPKKPY
        + NPP SYH          A PPP    P KK Y
Subjt:  RPNPPPSYHVITQQGSARRAAPPP----PPKKPY

A0A5A7UXN4 Extensin-3-like2.2e-0441.18Show/hide
Query:  LIFLNFPPNFAARYIHP---SPRSLPP-----------LSPPP----------PTT-------RPIVPYYPFKFPPPPSRKRPNPPPSYHV-----ITQQ
        L+  N P NFA  YI P   SP S+PP           + PPP          P++       RPIVPYYP+KF PPP RK  +PPP YHV     + QQ
Subjt:  LIFLNFPPNFAARYIHP---SPRSLPP-----------LSPPP----------PTT-------RPIVPYYPFKFPPPPSRKRPNPPPSYHV-----ITQQ

Query:  ------GSARRAAPPPPPK
                AR+AAP PPP+
Subjt:  ------GSARRAAPPPPPK

A0A5D3CVI1 Extensin-3-like7.2e-1153.33Show/hide
Query:  FPPNFAARYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK
        FPP F   +   +    PPL P     RPIVPYYP+KFPPPPSRK+ NPP SYH                   RRAAPPPPPKKPYQWPK
Subjt:  FPPNFAARYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVI-----------TQQGSARRAAPPPPPKKPYQWPK

A0A6J1CL44 extensin-3-like1.1e-0842.86Show/hide
Query:  PLFVFFLLIALIFLNFPPNFAA-RYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRK-------------------------RPNPPPSYHVITQQ
        P FV F L+AL+    P  FAA +YIHPSP SL P   P  T RPIVPYYPF FPPPP +K                         R  PPP YH     
Subjt:  PLFVFFLLIALIFLNFPPNFAA-RYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRK-------------------------RPNPPPSYHVITQQ

Query:  GSAR-------RAAPPPPPKKPYQWP
         +         +++PPPPPK+PYQWP
Subjt:  GSAR-------RAAPPPPPKKPYQWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATGGGATCTCATAAGCCCCTTTTTGTGTTCTTCCTCCTCATAGCATTGATCTTTTTAAATTTTCCACCAAACTTTGCTGCACGCTATATTCACCCATCTCCTCG
GTCGCTGCCGCCACTGTCACCACCACCTCCGACCACCAGGCCTATAGTTCCTTATTATCCCTTTAAGTTTCCACCACCTCCATCAAGAAAACGCCCCAATCCTCCTCCGA
GCTACCATGTCATTACCCAACAGGGCTCAGCACGGCGGGCAGCCCCGCCACCACCGCCTAAGAAGCCATACCAGTGGCCAAAGGTGACCGGCCGTAAATCGCCCCCACCT
CCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAATGGGATCTCATAAGCCCCTTTTTGTGTTCTTCCTCCTCATAGCATTGATCTTTTTAAATTTTCCACCAAACTTTGCTGCACGCTATATTCACCCATCTCCTCG
GTCGCTGCCGCCACTGTCACCACCACCTCCGACCACCAGGCCTATAGTTCCTTATTATCCCTTTAAGTTTCCACCACCTCCATCAAGAAAACGCCCCAATCCTCCTCCGA
GCTACCATGTCATTACCCAACAGGGCTCAGCACGGCGGGCAGCCCCGCCACCACCGCCTAAGAAGCCATACCAGTGGCCAAAGGTGACCGGCCGTAAATCGCCCCCACCT
CCTTTCTAG
Protein sequenceShow/hide protein sequence
MRMGSHKPLFVFFLLIALIFLNFPPNFAARYIHPSPRSLPPLSPPPPTTRPIVPYYPFKFPPPPSRKRPNPPPSYHVITQQGSARRAAPPPPPKKPYQWPKVTGRKSPPP
PF