; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029106 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029106
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr8:35439000..35439542
RNA-Seq ExpressionLag0029106
SyntenyLag0029106
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9621452.1 hypothetical protein IFM89_021524 [Coptis chinensis]2.2e-0840.59Show/hide
Query:  PSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPS-PSEESPVPQPP-VSEPIVPYFPFVYIPIPSPAEESP--VPQPPISEPIVPY
        PSKF   YV  P  +P   KP       P V  PIVPYFPF  +P  S P++  PV +PP V+ P VPYFPF ++P  +P +++P  V  P +  P VPY
Subjt:  PSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPS-PSEESPVPQPP-VSEPIVPYFPFVYIPIPSPAEESP--VPQPPISEPIVPY

Query:  FPFVYIPIPSPSEKPREDTSP-----PLSPYYPFRSPPP--PSRKR----FPPPDPSPWAPKFIVLSPPP
        FPF ++P  +P +K      P     P  PY+PFR  PP  P +K      PP  P+P  P F     PP
Subjt:  FPFVYIPIPSPSEKPREDTSP-----PLSPYYPFRSPPP--PSRKR----FPPPDPSPWAPKFIVLSPPP

PON76262.1 hypothetical protein PanWU01x14_036800 [Parasponia andersonii]6.5e-0840.33Show/hide
Query:  SPFAFY---LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEE
        SP AF    LL+ L SL+LPSK +A   + P   P  H   +SP P PPV  P  P  P+ Y   P P  + P   PPV  P  P  P+ Y   P P  +
Subjt:  SPFAFY---LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEE

Query:  SPVPQPPISEPIVPYFPFVY-IPIPSPSEKPRED---TSPPLSPYYPFRSPPPPSRKR--FPPPDPSPWAPKFIVLSPPPP
         P   PP+  P  P  P+ Y  P P P +KP       SPP  PY+ ++SPPPP  K+   PPP PSP    +   SPPPP
Subjt:  SPVPQPPISEPIVPYFPFVY-IPIPSPSEKPRED---TSPPLSPYYPFRSPPPPSRKR--FPPPDPSPWAPKFIVLSPPPP

ROT69497.1 hypothetical protein C7M84_012311 [Penaeus vannamei]5.0e-0840.88Show/hide
Query:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF
        +PS   + +   PSP P    P  SP P P    P  P  PF+ +P P P   SPV  PP S       PF  +P P P+  SPVP PP     VP  P 
Subjt:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF

Query:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF
         + P+PSP   P     SPP SP+ P  SPP       P P PSP++P   V SPPPPF
Subjt:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF

XP_022141655.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]9.3e-2349.51Show/hide
Query:  MGFATAISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSES--PMPQ----------PPVSEPIVPYFPFVYIPIPS--PSEESPVPQP---PV
        MG ATAI       LIA   LN+ +K SA++VH  SP P    P  S  P+P           PPV+EPIVPYFPFVYIP PS  P E +  P P    V
Subjt:  MGFATAISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSES--PMPQ----------PPVSEPIVPYFPFVYIPIPS--PSEESPVPQP---PV

Query:  SEPIVPYFPFVYIPIPS--PAEESPVPQP---PISEPIVPYFPFVYIPIPSPSEKPREDTSPPLSPYYPFRSP----PPPSRKRFPPPDPSPWAPKFIVL
        +EPIVPYFPFVYIP PS  P E +  P P    ++EPIVPYFPF +   PSPSE+P E T PP S   P+RSP    PP    R  P    PW P F V 
Subjt:  SEPIVPYFPFVYIPIPS--PAEESPVPQP---PISEPIVPYFPFVYIPIPSPSEKPREDTSPPLSPYYPFRSP----PPPSRKRFPPPDPSPWAPKFIVL

Query:  SPPPPF
        + PPPF
Subjt:  SPPPPF

XP_027222637.1 vegetative cell wall protein gp1-like, partial [Penaeus vannamei]5.0e-0840.88Show/hide
Query:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF
        +PS   + +   PSP P    P  SP P P    P  P  PF+ +P P P   SPV  PP S       PF  +P P P+  SPVP PP     VP  P 
Subjt:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF

Query:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF
         + P+PSP   P     SPP SP+ P  SPP       P P PSP++P   V SPPPPF
Subjt:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KCN5 RRM domain-containing protein7.7e-3151.91Show/hide
Query:  ISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP
        I PF   LL+AL SLNLPSKFSA Y HYP PLP+KHK SE P+ QP VSEPIVPYFPFVY+PIPSPSE+   P P                 P P ++  
Subjt:  ISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP

Query:  VPQPPISEPIVPYFPFVYIPIPSPSEKPREDTSP--------PLSPYYPFR-SPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF
         P  P S P+VPYFPFVY+P+PSPS+KP E  +P        P+ PYY FR SPP P +  +PPP+P     +F    PP P+
Subjt:  VPQPPISEPIVPYFPFVYIPIPSPSEKPREDTSP--------PLSPYYPFR-SPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF

A0A2P5DSL1 Uncharacterized protein3.1e-0840.33Show/hide
Query:  SPFAFY---LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEE
        SP AF    LL+ L SL+LPSK +A   + P   P  H   +SP P PPV  P  P  P+ Y   P P  + P   PPV  P  P  P+ Y   P P  +
Subjt:  SPFAFY---LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEE

Query:  SPVPQPPISEPIVPYFPFVY-IPIPSPSEKPRED---TSPPLSPYYPFRSPPPPSRKR--FPPPDPSPWAPKFIVLSPPPP
         P   PP+  P  P  P+ Y  P P P +KP       SPP  PY+ ++SPPPP  K+   PPP PSP    +   SPPPP
Subjt:  SPVPQPPISEPIVPYFPFVY-IPIPSPSEKPRED---TSPPLSPYYPFRSPPPPSRKR--FPPPDPSPWAPKFIVLSPPPP

A0A423SZ60 Uncharacterized protein2.4e-0840.88Show/hide
Query:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF
        +PS   + +   PSP P    P  SP P P    P  P  PF+ +P P P   SPV  PP S       PF  +P P P+  SPVP PP     VP  P 
Subjt:  LPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPF

Query:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF
         + P+PSP   P     SPP SP+ P  SPP       P P PSP++P   V SPPPPF
Subjt:  VYIPIPSPSEKPREDT-SPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF

A0A445CYN8 Uncharacterized protein1.2e-0735.14Show/hide
Query:  LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP------V
        L++A+ +L+ PS+ SA   HY SP P   +P     P PPV  P  PY+   Y   P P    P P    S P  P  P+ Y   P P    P       
Subjt:  LLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP------V

Query:  PQPPISEPIVPYF-------------PFVYIPIPSPSEKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP
        P PP+  P  PY+             P+ Y   P P +KP + +SPP  PY+ + SPPPP +K +  P P P  P +   SPPPP
Subjt:  PQPPISEPIVPYF-------------PFVYIPIPSPSEKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP

A0A6J1CIP8 leucine-rich repeat extensin-like protein 34.5e-2349.51Show/hide
Query:  MGFATAISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSES--PMPQ----------PPVSEPIVPYFPFVYIPIPS--PSEESPVPQP---PV
        MG ATAI       LIA   LN+ +K SA++VH  SP P    P  S  P+P           PPV+EPIVPYFPFVYIP PS  P E +  P P    V
Subjt:  MGFATAISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSES--PMPQ----------PPVSEPIVPYFPFVYIPIPS--PSEESPVPQP---PV

Query:  SEPIVPYFPFVYIPIPS--PAEESPVPQP---PISEPIVPYFPFVYIPIPSPSEKPREDTSPPLSPYYPFRSP----PPPSRKRFPPPDPSPWAPKFIVL
        +EPIVPYFPFVYIP PS  P E +  P P    ++EPIVPYFPF +   PSPSE+P E T PP S   P+RSP    PP    R  P    PW P F V 
Subjt:  SEPIVPYFPFVYIPIPS--PAEESPVPQP---PISEPIVPYFPFVYIPIPSPSEKPREDTSPPLSPYYPFRSP----PPPSRKRFPPPDPSPWAPKFIVL

Query:  SPPPPF
        + PPPF
Subjt:  SPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 12.7e-0440.25Show/hide
Query:  YVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPI-PSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPS
        Y   P P      P   P P PP  E   P     Y P+  SP   SPV  PPV++   P  P VY P   P   SP P  P+  P V Y P    P PS
Subjt:  YVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPI-PSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPS

Query:  PSEKPREDTS-PPLSP-YYP--FRSPPPPSRKRFPP--PDPSPWAPKF---IVLSPPPP
        P   P+   S PP SP YYP    SPPPPS   +PP  P P P +P +   +  SPPPP
Subjt:  PSEKPREDTS-PPLSP-YYP--FRSPPPPSRKRFPP--PDPSPWAPKF---IVLSPPPP

AT1G26250.1 Proline-rich extensin-like family protein6.0e-0438.82Show/hide
Query:  YPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVY-IPIPSPSEESPVPQPPVSEPIVPYFPFVY-IPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPSPS
        Y SP P  +  +  P P    S P  P  P+VY  P P P   S  P PP      P  P+VY  P P P   S  P PP      P  P+VY P P P 
Subjt:  YPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVY-IPIPSPSEESPVPQPPVSEPIVPYFPFVY-IPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPSPS

Query:  EKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDP----SPWAPKFIVLSPPPP
          P    SPP  PY     PPPP   + PPP P    SP  P ++  SPPPP
Subjt:  EKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDP----SPWAPKFIVLSPPPP

AT2G43150.1 Proline-rich extensin-like family protein2.7e-0432.26Show/hide
Query:  LIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPY---FPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP-----
        ++A+ +L + S  +    +Y SP P    P E   P PPV  P  PY    P   +  P P      P PPV  P  PY   VY   P P +  P     
Subjt:  LIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPY---FPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESP-----

Query:  -VPQPPISEPIVPYF------PFVYIPIPSPSEKPREDTSPPLSPYY------PFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP
          P PP+  P  PY+      P    P P     P      P  PYY      P +SPPPP     PPP      P ++  SPPPP
Subjt:  -VPQPPISEPIVPYF------PFVYIPIPSPSEKPREDTSPPLSPYY------PFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP

AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related3.5e-0435.14Show/hide
Query:  PSPLPEKHKPSES---PMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPSPS
        P+P+P    P  +   P P PPVS P     P V  P P  S   P P P V  P  P  P    P P+P    P P PP+S P     P V  P P   
Subjt:  PSPLPEKHKPSES---PMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQPPISEPIVPYFPFVYIPIPSPS

Query:  EKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP
          P     PP+SP  P  +P  PS     P  P+P  P    ++P PP
Subjt:  EKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP

AT4G18670.1 Leucine-rich repeat (LRR) family protein2.7e-0438.93Show/hide
Query:  SPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIP-SPAEESP--VPQPPISEPIVPYFPFVYIP--IPSP
        +P P    PS S  P PP++ P  P  P    P   PS  SP P  P+  P  P  P    P P SP + SP  +P PP + P  P  P   +P  IPSP
Subjt:  SPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIP-SPAEESP--VPQPPISEPIVPYFPFVYIP--IPSP

Query:  SEKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP
               +SPP S   P  SPPPPS    PPP  + ++P     SPPPP
Subjt:  SEKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGCAACTGCAATATCCCCATTTGCTTTCTACCTTCTCATTGCGTTGTTCTCTTTGAATCTGCCATCAAAATTTAGTGCACGATATGTTCATTATCCATCTCC
TTTACCCGAAAAGCATAAGCCATCAGAGTCGCCTATGCCACAACCTCCAGTCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCATCCG
AAGAGTCGCCTGTGCCACAACCTCCAGTCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCGGCCGAAGAGTCGCCTGTGCCACAACCT
CCCATCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCATCCGAAAAGCCTCGTGAAGATACATCACCGCCGCTGTCTCCTTATTATCC
CTTCCGGTCTCCACCGCCTCCCTCGAGAAAACGCTTTCCTCCTCCAGATCCCAGTCCCTGGGCACCCAAGTTCATTGTTCTATCTCCTCCACCTCCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGCAACTGCAATATCCCCATTTGCTTTCTACCTTCTCATTGCGTTGTTCTCTTTGAATCTGCCATCAAAATTTAGTGCACGATATGTTCATTATCCATCTCC
TTTACCCGAAAAGCATAAGCCATCAGAGTCGCCTATGCCACAACCTCCAGTCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCATCCG
AAGAGTCGCCTGTGCCACAACCTCCAGTCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCGGCCGAAGAGTCGCCTGTGCCACAACCT
CCCATCTCTGAGCCAATAGTTCCCTACTTTCCTTTTGTATATATACCAATACCATCCCCATCCGAAAAGCCTCGTGAAGATACATCACCGCCGCTGTCTCCTTATTATCC
CTTCCGGTCTCCACCGCCTCCCTCGAGAAAACGCTTTCCTCCTCCAGATCCCAGTCCCTGGGCACCCAAGTTCATTGTTCTATCTCCTCCACCTCCTTTCTGA
Protein sequenceShow/hide protein sequence
MGFATAISPFAFYLLIALFSLNLPSKFSARYVHYPSPLPEKHKPSESPMPQPPVSEPIVPYFPFVYIPIPSPSEESPVPQPPVSEPIVPYFPFVYIPIPSPAEESPVPQP
PISEPIVPYFPFVYIPIPSPSEKPREDTSPPLSPYYPFRSPPPPSRKRFPPPDPSPWAPKFIVLSPPPPF