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Lag0029113 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029113
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:35531242..35532638
RNA-Seq ExpressionLag0029113
SyntenyLag0029113
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042506.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]3.8e-0636.59Show/hide
Query:  LKCPIYFELNPGAEVQYISNSTLELRSKSSQILVKSNPVLELRSKPV--PISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPV-SIS
        L  P++ + NPG +V   SN            LVKS+P L+LRSKPV  P S   E EAC+    +I  P+   +  +   LVKS+P L+LR KPV    
Subjt:  LKCPIYFELNPGAEVQYISNSTLELRSKSSQILVKSNPVLELRSKPV--PISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPV-SIS

Query:  PGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKHVSIRFNIFRTNLELRSKSSQI
           EVEAC+    +I  P+   +  +   LVKS+P L+LR K     + +   + ELR    QI
Subjt:  PGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKHVSIRFNIFRTNLELRSKSSQI
TrEMBL top hitse value%identityAlignment
A0A5A7TKN3 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H1.8e-0636.59Show/hide
Query:  LKCPIYFELNPGAEVQYISNSTLELRSKSSQILVKSNPVLELRSKPV--PISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPV-SIS
        L  P++ + NPG +V   SN            LVKS+P L+LRSKPV  P S   E EAC+    +I  P+   +  +   LVKS+P L+LR KPV    
Subjt:  LKCPIYFELNPGAEVQYISNSTLELRSKSSQILVKSNPVLELRSKPV--PISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPV-SIS

Query:  PGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKHVSIRFNIFRTNLELRSKSSQI
           EVEAC+    +I  P+   +  +   LVKS+P L+LR K     + +   + ELR    QI
Subjt:  PGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKHVSIRFNIFRTNLELRSKSSQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGAAGACTAGTATTAAATTCTTTGGCCCCGGTCTCAAGTGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCCAATATATTTCGAACTCAACCCTGGA
GCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTACCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATC
AGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGT
CCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCT
GGAACTGAGGTCGAAGCATGTATCCATCAGGTTCAATATATTTCGAACCAACCTAGAGCTGAGGTCGAAGTCTTCTCAAATTTTGGCTAAATTGAACCCAGTCCTGGAAC
TGAGGTCGAAGCCTGTATTCATCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGAAGACTAGTATTAAATTCTTTGGCCCCGGTCTCAAGTGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCCAATATATTTCGAACTCAACCCTGGA
GCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTACCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATC
AGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGT
CCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCT
GGAACTGAGGTCGAAGCATGTATCCATCAGGTTCAATATATTTCGAACCAACCTAGAGCTGAGGTCGAAGTCTTCTCAAATTTTGGCTAAATTGAACCCAGTCCTGGAAC
TGAGGTCGAAGCCTGTATTCATCAGGTAA
Protein sequenceShow/hide protein sequence
MSVKTSIKFFGPGLKCPIYFELNPGAEVQYISNSTLELRSKSSQILVKSNPVLELRSKPVPISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPVSIS
PGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKHVSIRFNIFRTNLELRSKSSQILAKLNPVLELRSKPVFIR