CuGenDBv2

Gene ID	Lag0029124
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DUF150 domain-containing protein
Genome location	chr8:35622932..35623564
RNA-Seq Expression	Lag0029124
Synteny	Lag0029124
Gene Ontology terms	GO:0042274 - ribosomal small subunit biogenesis (biological process) GO:0005737 - cytoplasm (cellular component)
InterPro domains	IPR028989 - Ribosome maturation factor RimP, N-terminal IPR035956 - RimP, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148816.1 uncharacterized protein LOC101204078 [Cucumis sativus]

1.2e-65

91.37

Show/hide

Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP MEDIEAFSTTYRA+LD+AELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTN+V+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

XP_008441558.1 PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo]

1.4e-66

92.81

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

XP_008441560.1 PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo]

1.4e-66

92.81

Show/hide

Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

XP_023550697.1 uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo]

7.2e-63

90.58

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIA-SSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP MEDIEAFS+ YRA+LDEAEL+K+VPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+  SSSSESDGIFKLVSFDIE RCC WGLAD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIA-SSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
        VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD

XP_038884405.1 uncharacterized protein LOC120075260 [Benincasa hispida]

3.8e-64

91.37

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDV-IASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPEN+SLEVSSPGVERV++IPDELDRFKERAMYVKYTNDV  ASSSSESDGIFKLVSFDIEA+ CTWGLAD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDV-IASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQR+WRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDA0 DUF150 domain-containing protein

5.7e-66

91.37

Show/hide

Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP MEDIEAFSTTYRA+LD+AELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTN+V+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

A0A1S3B3P3 uncharacterized protein LOC103485652 isoform X1

6.8e-67

92.81

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

A0A1S3B4D1 uncharacterized protein LOC103485652 isoform X2

6.8e-67

92.81

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

A0A5A7UZ84 DUF150 domain-containing protein

6.8e-67

92.81

Show/hide

Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP+MEDIEAFSTTYRA+LDEAELAKSVPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+ ASSSSESDG+FKLVSFDIEA+CCTWG+AD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVI-ASSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        V+INREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

A0A6J1FH63 uncharacterized protein LOC111445430 isoform X2

1.0e-62

89.86

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Query:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIA-SSSSESDGIFKLVSFDIEARCCTWGLAD
        +SGSP MEDIEAFS+ YRA+LDEAEL+K+VPENISLEVSSPGVERV+RIPDELDRFKERAMYVKYTNDV+  SSSSESDGIFKLVSF+IE RCC WGLAD
Subjt:  RSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIA-SSSSESDGIFKLVSFDIEARCCTWGLAD

Query:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
        VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  VRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69210.1 Uncharacterised protein family UPF0090

8.6e-30

45.19

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Query:  GSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIASSSSESDGIFKLVSFDIEARCCTWGLADVRI
        G PTM+++E FS  ++ +LD+A   K +PE+++LEVSSPG ER++R+P++L RFK+  M V Y  +  +  + +S G+F L S D E+  C W LADVR 
Subjt:  GSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIASSSSESDGIFKLVSFDIEARCCTWGLADVRI

Query:  NREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
        NR+   KGRPLS+KQ++ R+  PF   + + LY D
Subjt:  NREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD

AT1G77122.1 Uncharacterised protein family UPF0090

4.8e-57

75.74

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Query:  GSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIASSSSESDGIFKLVSFDIEARCCTWGLADVRI
        GSPTMEDIEAFST YRA+L EAELAKS+P+NISLEVSSPGVERV+RIP +LDR+K+R MYV+YTN+    + +E DGIF+LVSFD+EA+ C WG+AD+R+
Subjt:  GSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIASSSSESDGIFKLVSFDIEARCCTWGLADVRI

Query:  NREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC
        NREKAGKGRPLSKKQREWRLET F+SLRLVRL+S+C
Subjt:  NREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

Sequences

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CDS sequence

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ATGTACCTCAGATCCGGTTCCCCCACTATGGAAGATATTGAGGCTTTTTCTACAACATATCGAGCACAATTGGATGAAGCAGAGCTTGCTAAATCCGTGCCAGAGAACAT
ATCTTTAGAGGTTTCATCTCCTGGTGTTGAACGGGTTATTCGGATTCCTGACGAGCTTGACCGGTTCAAAGAAAGGGCAATGTATGTGAAATACACAAACGACGTTATAG
CCAGTTCATCCTCCGAGAGTGATGGCATTTTCAAGCTTGTATCATTCGACATAGAAGCAAGATGCTGCACTTGGGGTTTGGCAGACGTGAGGATAAATAGAGAGAAGGCG
GGGAAAGGAAGACCACTAAGCAAAAAGCAAAGAGAATGGCGTTTAGAGACTCCCTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGA

mRNA sequence

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Protein sequence

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MYLRSGSPTMEDIEAFSTTYRAQLDEAELAKSVPENISLEVSSPGVERVIRIPDELDRFKERAMYVKYTNDVIASSSSESDGIFKLVSFDIEARCCTWGLADVRINREKA
GKGRPLSKKQREWRLETPFDSLRLVRLYSDC

Lag0029124 (gene) of Sponge gourd (AG-4) v1 genome