; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029151 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029151
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr8:35844639..35847249
RNA-Seq ExpressionLag0029151
SyntenyLag0029151
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0009694 - jasmonic acid metabolic process (biological process)
GO:0009850 - auxin metabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004564 - beta-fructofuranosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579696.1 Monocopper oxidase-like protein SKS1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1657.01Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSDS------FT
        MDT SDL+ PPYT L DH    PP+RKPL FT ATI+SLL LVSL+TLI +H PSP +      A S P F+L RGVA    AKS  Y SDS      F 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSDS------FT

Query:  WTNTMFS
        WTN MFS
Subjt:  WTNTMFS

XP_004143623.1 acid beta-fructofuranosidase 1, vacuolar [Cucumis sativus]6.4e-1759.41Show/hide
Query:  TTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATI-ISLLFLVSLVTLIS-NHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD----SFTWTNTMF
        T+SDL  PPY+ L D H SPP +RK L FTT TI IS L +VSL+TL S NH PSP+S +LP+N QS     +A GV+AKSN YFSD    SF WTN MF
Subjt:  TTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATI-ISLLFLVSLVTLIS-NHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD----SFTWTNTMF

Query:  S
        S
Subjt:  S

XP_022929002.1 acid beta-fructofuranosidase 1, vacuolar-like [Cucurbita moschata]1.3e-1757.94Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT
        MDT SDL+ PPYT L DH    PP+RKPL+FT ATI+SLL LVSL+TLI +H PSP +T      QS P  KL RGVA    AKS  Y SD      SF 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT

Query:  WTNTMFS
        WTN MFS
Subjt:  WTNTMFS

XP_023550101.1 acid beta-fructofuranosidase 1, vacuolar-like [Cucurbita pepo subsp. pepo]1.4e-1655.34Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD------SFTWTNT
        MDT SDL+ PPYT L DH    PP+RKPL FT ATI+SLL LVS++TLI +H PSP +T+ P   +   P  +A GV+AKS  Y SD      SF WTN 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD------SFTWTNT

Query:  MFS
        MFS
Subjt:  MFS

XP_038874686.1 acid beta-fructofuranosidase 1, vacuolar-like [Benincasa hispida]1.1e-2163.55Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTAT--IISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD----SFT
        MD TSDL  PPYT L D H SP PTRK L  +TAT  +ISLL LVSL+ LIS H PSP++ +LP N QS PPF+LARGVA    AKSN YFSD    SF 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTAT--IISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD----SFT

Query:  WTNTMFS
        WTN MFS
Subjt:  WTNTMFS

TrEMBL top hitse value%identityAlignment
A0A0A0KLF0 Beta-fructofuranosidase3.1e-1759.41Show/hide
Query:  TTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATI-ISLLFLVSLVTLIS-NHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD----SFTWTNTMF
        T+SDL  PPY+ L D H SPP +RK L FTT TI IS L +VSL+TL S NH PSP+S +LP+N QS     +A GV+AKSN YFSD    SF WTN MF
Subjt:  TTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATI-ISLLFLVSLVTLIS-NHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSD----SFTWTNTMF

Query:  S
        S
Subjt:  S

A0A6J1ELJ2 Beta-fructofuranosidase6.2e-1857.94Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT
        MDT SDL+ PPYT L DH    PP+RKPL+FT ATI+SLL LVSL+TLI +H PSP +T      QS P  KL RGVA    AKS  Y SD      SF 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT

Query:  WTNTMFS
        WTN MFS
Subjt:  WTNTMFS

A0A6J1FD79 pentatricopeptide repeat-containing protein At3g265402.0e-1684.31Show/hide
Query:  SIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        SI+D+DHVTL LILNVCTGLLDVERGKQVHG +YR+GFYANLYIGNAL D+
Subjt:  SIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

A0A6J1I2F4 Beta-fructofuranosidase1.3e-1555.14Show/hide
Query:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT
        MDT SDL+ PPYT L DH    PP+RKPL  T ATI+SLL LVSL+TLI +H  SP +T  P      P F+L RGVA    AKS  Y SD      SF 
Subjt:  MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVA----AKSNLYFSD------SFT

Query:  WTNTMFS
        WTN MFS
Subjt:  WTNTMFS

A0A6J1K1B7 pentatricopeptide repeat-containing protein At3g265402.0e-1684.31Show/hide
Query:  SIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        SI+D+DHVTL LILNVCTGLLDVERGKQVHG +YR+GFYANLYIGNAL D+
Subjt:  SIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

SwissProt top hitse value%identityAlignment
Q9LRV2 Pentatricopeptide repeat-containing protein At3g265402.3e-0951.79Show/hide
Query:  TMFSCSIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        T+    IE+ID+VTL  ILNVC+G+ DV+ GKQ HG +YR G+  N+ + NAL D+
Subjt:  TMFSCSIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

Arabidopsis top hitse value%identityAlignment
AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein3.0e-0441.86Show/hide
Query:  DHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNAL
        DH T   ++  C G+ DV  G  VHGLV + G   ++++GNAL
Subjt:  DHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNAL

AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein5.1e-0443.59Show/hide
Query:  ILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        +L+ C+GL D+ +G QVH L+ +  F +++YIG+AL D+
Subjt:  ILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

AT2G36980.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-0437.5Show/hide
Query:  DIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        D DH     +L+ C+GL  +  GK +HG +   GF    Y+GNAL ++
Subjt:  DIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.9e-0439.13Show/hide
Query:  DHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        DH     +L  CT ++D+  G+ VHG + R+G   +LY GNAL ++
Subjt:  DHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI

AT3G26540.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-1051.79Show/hide
Query:  TMFSCSIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI
        T+    IE+ID+VTL  ILNVC+G+ DV+ GKQ HG +YR G+  N+ + NAL D+
Subjt:  TMFSCSIEDIDHVTLHLILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCACTTCAGATCTCCACTCTCCACCGTACACGCCCTTGTCGGACCACCACTCCTCGCCGCCGCCAACTCGAAAACCCCTCTACTTCACGACTGCTACCATTAT
CTCTCTTCTTTTTCTTGTCTCTTTAGTCACTCTCATTTCCAACCATGCCCCATCGCCCGAATCCACCAGATTGCCAAAAAACGCCCAATCGTCGCCGCCGTTTAAGCTGG
CCAGAGGCGTCGCCGCCAAATCGAACCTGTATTTTTCTGATTCGTTCACCTGGACCAACACTATGTTCTCTTGTTCGATTGAGGATATTGATCACGTTACTCTTCACCTG
ATACTGAATGTGTGTACTGGCCTTTTAGATGTTGAAAGGGGAAAGCAAGTTCATGGTCTTGTTTATAGAGTTGGTTTCTATGCTAATCTCTATATTGGCAATGCCCTTTT
TGACATCCGTGAGTCCTCTGCAGCTCCCTTCCTCGGTCGATTGTCTTCCTCGGCGGCCCATTCTCCGGCGAACTTGGAACCACGAGCGGCGGCGGCGTTCCAGCACCTAA
GGCGCGCGAAGAAGGGGCGTTCCGCGGACAGTAGCCCTCGATCGCATGCCGGCCATTGTTGCAGCGTGGGTGTCGAGCGGCGGCGTTTTCAGCAGCTTTCGGGGTTGATT
TCCGGCGTTTTGTTCAGTGGTGGGTCTTCAAGTTTCAGTGTCGTGGAGCATTATCGGCAGTGGGTTTTCGTGGCATTCGGGATTGTATTTGTCATTTTGGAGCGAGATTG
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACCACTTCAGATCTCCACTCTCCACCGTACACGCCCTTGTCGGACCACCACTCCTCGCCGCCGCCAACTCGAAAACCCCTCTACTTCACGACTGCTACCATTAT
CTCTCTTCTTTTTCTTGTCTCTTTAGTCACTCTCATTTCCAACCATGCCCCATCGCCCGAATCCACCAGATTGCCAAAAAACGCCCAATCGTCGCCGCCGTTTAAGCTGG
CCAGAGGCGTCGCCGCCAAATCGAACCTGTATTTTTCTGATTCGTTCACCTGGACCAACACTATGTTCTCTTGTTCGATTGAGGATATTGATCACGTTACTCTTCACCTG
ATACTGAATGTGTGTACTGGCCTTTTAGATGTTGAAAGGGGAAAGCAAGTTCATGGTCTTGTTTATAGAGTTGGTTTCTATGCTAATCTCTATATTGGCAATGCCCTTTT
TGACATCCGTGAGTCCTCTGCAGCTCCCTTCCTCGGTCGATTGTCTTCCTCGGCGGCCCATTCTCCGGCGAACTTGGAACCACGAGCGGCGGCGGCGTTCCAGCACCTAA
GGCGCGCGAAGAAGGGGCGTTCCGCGGACAGTAGCCCTCGATCGCATGCCGGCCATTGTTGCAGCGTGGGTGTCGAGCGGCGGCGTTTTCAGCAGCTTTCGGGGTTGATT
TCCGGCGTTTTGTTCAGTGGTGGGTCTTCAAGTTTCAGTGTCGTGGAGCATTATCGGCAGTGGGTTTTCGTGGCATTCGGGATTGTATTTGTCATTTTGGAGCGAGATTG
TTAG
Protein sequenceShow/hide protein sequence
MDTTSDLHSPPYTPLSDHHSSPPPTRKPLYFTTATIISLLFLVSLVTLISNHAPSPESTRLPKNAQSSPPFKLARGVAAKSNLYFSDSFTWTNTMFSCSIEDIDHVTLHL
ILNVCTGLLDVERGKQVHGLVYRVGFYANLYIGNALFDIRESSAAPFLGRLSSSAAHSPANLEPRAAAAFQHLRRAKKGRSADSSPRSHAGHCCSVGVERRRFQQLSGLI
SGVLFSGGSSSFSVVEHYRQWVFVAFGIVFVILERDC