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Lag0029166 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029166
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr8:35988400..35989035
RNA-Seq ExpressionLag0029166
SyntenyLag0029166
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG46396.1 hypothetical protein EZV62_028104 [Acer yangbiense]1.2e-1240.66Show/hide
Query:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L LC+V KVLT++ VN  AF ++M S WRV     +E A GN+FV+ F+   ++ R+L  GPW FDR+++V +E   +  +L   F+   F
Subjt:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

TXG70085.1 hypothetical protein EZV62_005020 [Acer yangbiense]1.2e-1240.66Show/hide
Query:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L LC+V KVLT++ VN  AF ++M S WRV     +E A GN+FV+ F+   ++ R+L  GPW FDR+++V +E   +  +L   F+   F
Subjt:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.4e-1846.88Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+  +++LCVV K+ TSKR++ +A R+VM+S WRVHN+TR EP G N++V+ F++  EK RVL +GPW F++SL+VL         L+ +F+ C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.9e-1743.75Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+V +++LC V K+  SKR+  +AF +VM+  W++HN+TR+E AG N++V+ F+T  EK+RV   GPW FD+SL++L  +      L+ D S C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.2e-1543.75Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+  +++LC V K+ TSKR++  A  +VM+  W++H +TR+E AG N++V+ F+T  EK RVL +GPW FD+SL VL         L+ DF  C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

TrEMBL top hitse value%identityAlignment
A0A5C7GQA1 CCHC-type domain-containing protein6.0e-1340.66Show/hide
Query:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L LC+V KVLT++ VN  AF ++M S WRV     +E A GN+FV+ F+   ++ R+L  GPW FDR+++V +E   +  +L   F+   F
Subjt:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

A0A5C7ILM0 CCHC-type domain-containing protein6.0e-1340.66Show/hide
Query:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L LC+V KVLT++ VN  AF ++M S WRV     +E A GN+FV+ F+   ++ R+L  GPW FDR+++V +E   +  +L   F+   F
Subjt:  LELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

A0A6J1D765 uncharacterized protein LOC1110179021.6e-1846.88Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+  +++LCVV K+ TSKR++ +A R+VM+S WRVHN+TR EP G N++V+ F++  EK RVL +GPW F++SL+VL         L+ +F+ C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

A0A6J1DVS4 uncharacterized protein LOC1110235551.4e-1743.75Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+V +++LC V K+  SKR+  +AF +VM+  W++HN+TR+E AG N++V+ F+T  EK+RV   GPW FD+SL++L  +      L+ D S C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

A0A6J1DYG3 uncharacterized protein LOC1110246765.8e-1643.75Show/hide
Query:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF
        L+  +++LC V K+ TSKR++  A  +VM+  W++H +TR+E AG N++V+ F+T  EK RVL +GPW FD+SL VL         L+ DF  C F
Subjt:  LSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRTRGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTAGGTTGCAGGTGGGGCACTACCGTCGTTGTGTTGTGGTTTTCTATAGGTTCCAGTGGGTCGTGTGTTTGTTGAAAGTGAGTGTTACGTTTTGTGGTGTGCT
TGAGAGGCAGCGGTGGAGGTTCGCGAGTGTTCGTCCAGGTACAGTTTCGTCTTCTCTGTCGGTGACAGACTTGGAGCTATGTGTGGTGTGCAAGGTTCTGACGTCCAAGC
GGGTCAACCCAGATGCTTTTCGCAATGTGATGCGATCGGCGTGGAGAGTTCATAATGCGACACGTGTGGAGCCGGCTGGAGGGAATGTTTTCGTGGTTCAGTTCCGTACC
AGGGGCGAAAAGTTGAGAGTTCTGGGTACTGGTCCTTGGGCTTTTGATCGATCCCTGGTTGTGCTAAAGGAATCAAAAGATATTGCATCGGTGCTAGAAACAGATTTTAG
TGACTGTCCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTAGGTTGCAGGTGGGGCACTACCGTCGTTGTGTTGTGGTTTTCTATAGGTTCCAGTGGGTCGTGTGTTTGTTGAAAGTGAGTGTTACGTTTTGTGGTGTGCT
TGAGAGGCAGCGGTGGAGGTTCGCGAGTGTTCGTCCAGGTACAGTTTCGTCTTCTCTGTCGGTGACAGACTTGGAGCTATGTGTGGTGTGCAAGGTTCTGACGTCCAAGC
GGGTCAACCCAGATGCTTTTCGCAATGTGATGCGATCGGCGTGGAGAGTTCATAATGCGACACGTGTGGAGCCGGCTGGAGGGAATGTTTTCGTGGTTCAGTTCCGTACC
AGGGGCGAAAAGTTGAGAGTTCTGGGTACTGGTCCTTGGGCTTTTGATCGATCCCTGGTTGTGCTAAAGGAATCAAAAGATATTGCATCGGTGCTAGAAACAGATTTTAG
TGACTGTCCTTTCTAG
Protein sequenceShow/hide protein sequence
MVLRLQVGHYRRCVVVFYRFQWVVCLLKVSVTFCGVLERQRWRFASVRPGTVSSSLSVTDLELCVVCKVLTSKRVNPDAFRNVMRSAWRVHNATRVEPAGGNVFVVQFRT
RGEKLRVLGTGPWAFDRSLVVLKESKDIASVLETDFSDCPF