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Lag0029171 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029171
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:36027388..36028154
RNA-Seq ExpressionLag0029171
SyntenyLag0029171
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]5.3e-2539.09Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK KVP KFK+P  K+YDG  DP+ HL+ Y  W D + +++AIRCR F FTLTGS R WF++LKR+SIS FKELA+AF+ QF G   +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRP
                                                     GK  + T++E  S AQ YMS  EL+ SKR  +         Y    TK  RP
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRP

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.7e-2336.25Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK KVP KFK+PT KQ+DG  D V HL+AYR WMD + VS+A++CR F  TL+GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRPTRE
                                                     GK    T++E +S AQKYMSA E   SKR E E K+ S  N   +   G +P   
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRPTRE

Query:  AEAEQTMAETDQTKEHILSVSSRNTPNCCSTGASTDGDPKYGPPEIPREDE
                + D++   I   + +N        +  +GD +    ++ REDE
Subjt:  AEAEQTMAETDQTKEHILSVSSRNTPNCCSTGASTDGDPKYGPPEIPREDE

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]5.3e-2538.65Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK K   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRCR F FTLTGS R+WF +LKR SIS FKELA+AF+ QF+G R + +P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRS-EREYKRFSSSNYDIKRTKGSRPTR
                                                     GK    T+ E +S AQKYMSA EL+   R  ERE      +NY  KR +      
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRS-EREYKRFSSSNYDIKRTKGSRPTR

Query:  EAEAEQT
         +  E++
Subjt:  EAEAEQT

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.0e-2542.53Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        M+ KVP KFK+PT KQ+D   DPV HL+AYR WMD + VS+A+RCR F  TL GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKR
                                                     GK    T++E +S AQ+YMSA E   SKR
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.9e-2440.29Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVK-
        M+ KVP KFK+PT K +DG  +PV HL+AYR WMD + VSDAIRCR F  TL GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+K 
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVK-

Query:  ------------------QLPG------------------------KSQTRTYAEFVSLAQKYMSAEELLKSKRS----------EREYKRFSSSNYDIK
                          QL G                        K    T++E +S AQ+YMSA E   SKR           ER   +   S ++ K
Subjt:  ------------------QLPG------------------------KSQTRTYAEFVSLAQKYMSAEELLKSKRS----------EREYKRFSSSNYDIK

Query:  RTKGSR
        R +GS+
Subjt:  RTKGSR

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.5e-2539.09Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK KVP KFK+P  K+YDG  DP+ HL+ Y  W D + +++AIRCR F FTLTGS R WF++LKR+SIS FKELA+AF+ QF G   +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRP
                                                     GK  + T++E  S AQ YMS  EL+ SKR  +         Y    TK  RP
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRP

A0A6J1D7D2 uncharacterized protein LOC1110183078.2e-2436.25Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK KVP KFK+PT KQ+DG  D V HL+AYR WMD + VS+A++CR F  TL+GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRPTRE
                                                     GK    T++E +S AQKYMSA E   SKR E E K+ S  N   +   G +P   
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRPTRE

Query:  AEAEQTMAETDQTKEHILSVSSRNTPNCCSTGASTDGDPKYGPPEIPREDE
                + D++   I   + +N        +  +GD +    ++ REDE
Subjt:  AEAEQTMAETDQTKEHILSVSSRNTPNCCSTGASTDGDPKYGPPEIPREDE

A0A6J1DWY0 uncharacterized protein LOC1110252931.9e-2542.53Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        M+ KVP KFK+PT KQ+D   DPV HL+AYR WMD + VS+A+RCR F  TL GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKR
                                                     GK    T++E +S AQ+YMSA E   SKR
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKR

A0A6J1DZ49 uncharacterized protein LOC1110248512.5e-2538.65Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ
        MK K   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRCR F FTLTGS R+WF +LKR SIS FKELA+AF+ QF+G R + +P   LLT+KQ
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQ

Query:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRS-EREYKRFSSSNYDIKRTKGSRPTR
                                                     GK    T+ E +S AQKYMSA EL+   R  ERE      +NY  KR +      
Subjt:  LP-------------------------------------------GKSQTRTYAEFVSLAQKYMSAEELLKSKRS-EREYKRFSSSNYDIKRTKGSRPTR

Query:  EAEAEQT
         +  E++
Subjt:  EAEAEQT

A0A6J1E1E7 uncharacterized protein LOC1110255484.8e-2440.29Show/hide
Query:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVK-
        M+ KVP KFK+PT K +DG  +PV HL+AYR WMD + VSDAIRCR F  TL GS R WF +LKR SIS FK LA+AF+ QF+G R +  P   LLT+K 
Subjt:  MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVK-

Query:  ------------------QLPG------------------------KSQTRTYAEFVSLAQKYMSAEELLKSKRS----------EREYKRFSSSNYDIK
                          QL G                        K    T++E +S AQ+YMSA E   SKR           ER   +   S ++ K
Subjt:  ------------------QLPG------------------------KSQTRTYAEFVSLAQKYMSAEELLKSKRS----------EREYKRFSSSNYDIK

Query:  RTKGSR
        R +GS+
Subjt:  RTKGSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCAAGGTGCCCCAAAAGTTTAAGGTACCCACGTTCAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATATAGAAGCTGGATGGACTTCCA
CAGCGTCTCAGATGCAATCAGATGTCGTGCATTCTTTTTCACTCTGACAGGATCAGTCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAAGAGT
TGGCCCAAGCATTCCTGGCACAGTTTATGGGAGCCAGAGAGCAACGCGAGCCTCACATCAACCTCTTGACAGTCAAACAACTGCCAGGTAAGAGCCAAACTCGAACCTAT
GCGGAGTTTGTCTCCCTAGCACAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGTACAAAAGGTTTTCTTCATCTAACTACGACATAAA
AAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGACCGACCAGACCAAGGAGCACATCCTTTCGGTAAGTTCGAGAAATACACCCA
ACTGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCAAGGTGCCCCAAAAGTTTAAGGTACCCACGTTCAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATATAGAAGCTGGATGGACTTCCA
CAGCGTCTCAGATGCAATCAGATGTCGTGCATTCTTTTTCACTCTGACAGGATCAGTCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAAGAGT
TGGCCCAAGCATTCCTGGCACAGTTTATGGGAGCCAGAGAGCAACGCGAGCCTCACATCAACCTCTTGACAGTCAAACAACTGCCAGGTAAGAGCCAAACTCGAACCTAT
GCGGAGTTTGTCTCCCTAGCACAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGTACAAAAGGTTTTCTTCATCTAACTACGACATAAA
AAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGACCGACCAGACCAAGGAGCACATCCTTTCGGTAAGTTCGAGAAATACACCCA
ACTGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGATAG
Protein sequenceShow/hide protein sequence
MKAKVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHSVSDAIRCRAFFFTLTGSVRHWFERLKRRSISCFKELAQAFLAQFMGAREQREPHINLLTVKQLPGKSQTRTY
AEFVSLAQKYMSAEELLKSKRSEREYKRFSSSNYDIKRTKGSRPTREAEAEQTMAETDQTKEHILSVSSRNTPNCCSTGASTDGDPKYGPPEIPREDEVECR