| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.7e-09 | 34.27 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNVHK
FVLK+LI KLA E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF ++ +
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNVHK
Query: KEKENFA--TSYCIDV-------EEVDNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL----------------------------------
+ E A T+ ++V EE+DNS +QRTSVFD IKP TTR S FQR+SMA +EENQ
Subjt: KEKENFA--TSYCIDV-------EEVDNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL----------------------------------
Query: --------------------NSDKKLQSSIPSRMKRKFSVLINTEGSL
N D K+ S +PSRMKRK SV INTEGSL
Subjt: --------------------NSDKKLQSSIPSRMKRKFSVLINTEGSL
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| KAA0035697.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.6e-09 | 35.05 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
FVLK+LILKLA E KI+LD+DE+AQ+N ++ S P L + Q ++ V+ + + N+A+S +EV NS +Q
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
Query: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
TSVF+RIKP TTR S FQR+SMA EEENQ N+D K+ S + SRM
Subjt: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
Query: KRKFSVLINTEGSL
KRK SV INTEGSL
Subjt: KRKFSVLINTEGSL
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| KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.8e-08 | 27.97 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNL------------------------------------------------------------------------
FVLK+LILKLA E KI+LD+DEVAQ+N
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNL------------------------------------------------------------------------
Query: ------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFA------TSYCIDV-------EEVDNSEMGEQRTS
I K K +R K K +P +++ +KF QP++ + L + F ++ + E T+ ++V EEVDNS +QRTS
Subjt: ------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFA------TSYCIDV-------EEVDNSEMGEQRTS
Query: VFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRMKRK
VFDRIKP TTR S FQR+SMA EEENQ N D K+ S +PSR+KRK
Subjt: VFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRMKRK
Query: FSVLINTEGSL
S+ INTEGSL
Subjt: FSVLINTEGSL
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-12 | 37.39 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEV
FVLK+LILKLA E KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + ++ + + N+ +S +EV
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEV
Query: DNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKL
+NS QRTSVFDRIKP TTR S FQR+S+A EEENQ N D K+
Subjt: DNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKL
Query: QSSIPSRMKRKFSVLINTEGSL
S +PSRMKRK V INTEGSL
Subjt: QSSIPSRMKRKFSVLINTEGSL
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| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.8e-11 | 37.38 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
FVLK+LILKLA + KIELD+DEVAQ+N A + S P L +S P++++ + + ++ E +N SY EEVDNS +Q
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
Query: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
RT VFDRIKP TTR S FQR+SMA EEE Q N D K+ S +PSR
Subjt: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
Query: KRKFSVLINTEGSL
KRK SV INTEGSL
Subjt: KRKFSVLINTEGSL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.3e-09 | 34.27 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNVHK
FVLK+LI KLA E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF ++ +
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNVHK
Query: KEKENFA--TSYCIDV-------EEVDNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL----------------------------------
+ E A T+ ++V EE+DNS +QRTSVFD IKP TTR S FQR+SMA +EENQ
Subjt: KEKENFA--TSYCIDV-------EEVDNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL----------------------------------
Query: --------------------NSDKKLQSSIPSRMKRKFSVLINTEGSL
N D K+ S +PSRMKRK SV INTEGSL
Subjt: --------------------NSDKKLQSSIPSRMKRKFSVLINTEGSL
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| A0A5A7U974 Retrotransposon gag protein | 8.6e-09 | 27.97 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNL------------------------------------------------------------------------
FVLK+LILKLA E KI+LD+DEVAQ+N
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNL------------------------------------------------------------------------
Query: ------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFA------TSYCIDV-------EEVDNSEMGEQRTS
I K K +R K K +P +++ +KF QP++ + L + F ++ + E T+ ++V EEVDNS +QRTS
Subjt: ------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFA------TSYCIDV-------EEVDNSEMGEQRTS
Query: VFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRMKRK
VFDRIKP TTR S FQR+SMA EEENQ N D K+ S +PSR+KRK
Subjt: VFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRMKRK
Query: FSVLINTEGSL
S+ INTEGSL
Subjt: FSVLINTEGSL
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| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 7.5e-13 | 37.39 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEV
FVLK+LILKLA E KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + ++ + + N+ +S +EV
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEV
Query: DNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKL
+NS QRTSVFDRIKP TTR S FQR+S+A EEENQ N D K+
Subjt: DNSEMGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKL
Query: QSSIPSRMKRKFSVLINTEGSL
S +PSRMKRK V INTEGSL
Subjt: QSSIPSRMKRKFSVLINTEGSL
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| A0A5D3CA53 Retrotransposon gag protein | 1.9e-11 | 37.38 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
FVLK+LILKLA + KIELD+DEVAQ+N A + S P L +S P++++ + + ++ E +N SY EEVDNS +Q
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
Query: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
RT VFDRIKP TTR S FQR+SMA EEE Q N D K+ S +PSR
Subjt: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
Query: KRKFSVLINTEGSL
KRK SV INTEGSL
Subjt: KRKFSVLINTEGSL
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| A0A5D3E4T1 Retrotransposon gag protein | 1.7e-09 | 35.05 | Show/hide |
Query: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
FVLK+LILKLA E KI+LD+DE+AQ+N ++ S P L + Q ++ V+ + + N+A+S +EV NS +Q
Subjt: FVLKDLILKLAMEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNVHKKEKENFATSYCIDVEEVDNSEMGEQ
Query: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
TSVF+RIKP TTR S FQR+SMA EEENQ N+D K+ S + SRM
Subjt: RTSVFDRIKPPTTRPSAFQRMSMAATEEENQL------------------------------------------------------NSDKKLQSSIPSRM
Query: KRKFSVLINTEGSL
KRK SV INTEGSL
Subjt: KRKFSVLINTEGSL
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