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Lag0029183 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029183
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionchalcone synthase-like
Genome locationchr8:36168776..36169171
RNA-Seq ExpressionLag0029183
SyntenyLag0029183
Gene Ontology termsGO:0030639 - polyketide biosynthetic process (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR011141 - Polyketide synthase, type III
IPR012328 - Chalcone/stilbene synthase, C-terminal
IPR016039 - Thiolase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
3WD8_A TypeIII polyketide synthases [Citrus x microcarpa]1.8e-3662.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

GAY52068.1 hypothetical protein CUMW_139120, partial [Citrus unshiu]1.8e-3662.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

XP_006434306.1 chalcone synthase [Citrus clementina]1.8e-3662.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

XP_006473029.1 chalcone synthase-like [Citrus sinensis]1.1e-3662.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K+T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

XP_022141572.1 chalcone synthase-like [Momordica charantia]2.7e-4069.53Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        MG +Y LSRNIPK++G NI+KCL  A      +YNSLFY IHPGGRA+LDEIE+ LGL + KLE SR VL EYGNM G TV FVLDE R KSIR+GKSTT
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        G G +CGVL+  GPGLTIETLIL+SVPI
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

TrEMBL top hitse value%identityAlignment
A0A2H5PI80 Uncharacterized protein (Fragment)8.9e-3762.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

A0A6J1CK67 chalcone synthase-like1.3e-4069.53Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        MG +Y LSRNIPK++G NI+KCL  A      +YNSLFY IHPGGRA+LDEIE+ LGL + KLE SR VL EYGNM G TV FVLDE R KSIR+GKSTT
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        G G +CGVL+  GPGLTIETLIL+SVPI
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

U3KRF1 Type III polyketide synthase quinolone synthase8.9e-3762.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

U6C889 Quinolone synthase8.9e-3762.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

V4TCZ9 Uncharacterized protein8.9e-3762.79Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        MG    LS+++P  VG NI+K L DA+ P GI+++NSLFY++HPGGRA+LD++E  LGL K KL  SR+VL EYGNM GS+V F+LDE RKKS++E K T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TGDGLE GVL  +GPGLT+ET+IL SVPI
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI

SwissProt top hitse value%identityAlignment
F1LKH7 Polyketide synthase 28.0e-3553.91Show/hide
Query:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        G ++ L +++P  +  NI+KCL +A  P GI+++NS+F+  HPGG+A+LD++E+KL L+  K   SR+VL E+GNM  STV FV+DE RK+S+ EGKSTT
Subjt:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        GDG E GVL   GPGLT+E ++L+SVPI
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

F1LKH8 Polyketide synthase 44.7e-3553.91Show/hide
Query:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        G ++ L +++P  +  NI+KCL +A  P GI+++NS+F+  HPGG+A+LD++E+KL L+K K   SR+VL E+GNM  STV FV+DE RK+S+ EGKSTT
Subjt:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        GDG E GVL   GPGLT+E ++++SVPI
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

F1LKH9 Polyketide synthase 55.5e-3655.47Show/hide
Query:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        G ++ L +++P  +  NI+KCL +A  P GI+++NS+F+  HPGG+A+LD++E+KL L+K K   SR+VL E+GNM  STV FV+DE RK+S+ EGKSTT
Subjt:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        GDG E GVL   GPGLT+ET++L+SVPI
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

P53416 Bibenzyl synthase2.1e-3555.47Show/hide
Query:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        G L  L R++P+ V  N+ KCL +A  P GI+++NS+F+  HPGGRA+LD++E+++GL+  KL VSR+VL EYGNM    V F LDE RK+S  EGK+TT
Subjt:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        G+GLE GVL   GPGLT+ET++L+SVP+
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

Q94FV7 Polyketide synthase BAS6.1e-3552.34Show/hide
Query:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT
        G  + L + +P  +  NIK CL DA  P  I+++NSLF+  HPGG A+LD++  K+GLEK KL+V+R VL++YGNM  +TV F++DE RKKS+  G++TT
Subjt:  GCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTT

Query:  GDGLECGVLVTLGPGLTIETLILQSVPI
        G+GLE GVL   GPG+T+ET++L+SVP+
Subjt:  GDGLECGVLVTLGPGLTIETLILQSVPI

Arabidopsis top hitse value%identityAlignment
AT1G02050.1 Chalcone and stilbene synthase family protein4.1e-1837.21Show/hide
Query:  GCLYQLSRNIPKYVGGNI----KKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGK
        G  ++L R++P+ +  NI    KK +G A    + E+N +F+A+HPGG A+L+ +E KL LEK KLE SR  L +YGN+  +T+ +V++  R +  ++G 
Subjt:  GCLYQLSRNIPKYVGGNI----KKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGK

Query:  STTGDGLECGVLVTLGPGLTIETLILQSV
        +      E G+ +  GPG+T E L+++S+
Subjt:  STTGDGLECGVLVTLGPGLTIETLILQSV

AT1G04220.1 3-ketoacyl-CoA synthase 27.2e-0738.96Show/hide
Query:  YAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKS-IREGKST----TGDGLECGVLV
        + IH GGRAVLDEIE+ L L +  +E SR  L  +GN   S++ + L  +  K  I+ G  T     G G +C   V
Subjt:  YAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKS-IREGKST----TGDGLECGVLV

AT4G00040.1 Chalcone and stilbene synthase family protein7.0e-1835.16Show/hide
Query:  GCLYQLSRNIPKYVGGNIK---KCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKS
        G  ++L R++P+ +  N++   K L     SG  E N LF+A+HPGG A+L  +E KL L+  KLE SR  L +YGN+  +T+ +++D+ R +  ++G  
Subjt:  GCLYQLSRNIPKYVGGNIK---KCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKS

Query:  TTGDGLECGVLVTLGPGLTIETLILQSV
           +G E G+ +  GPG+T E  +++++
Subjt:  TTGDGLECGVLVTLGPGLTIETLILQSV

AT4G34850.1 Chalcone and stilbene synthase family protein3.8e-1633.59Show/hide
Query:  GCLYQLSRNIPKYVGGNI----KKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGK
        G  ++LSR +P+ +  N+    KK +G A  +  N YN +F+A+HPGG A+L+ IE++L L   KL  SR  L +YGN   +++ +VL+   ++S ++ +
Subjt:  GCLYQLSRNIPKYVGGNI----KKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGK

Query:  STTGDGLECGVLVTLGPGLTIETLILQSVPI
        +   +  E G+++  GPG+T E +I +++ +
Subjt:  STTGDGLECGVLVTLGPGLTIETLILQSVPI

AT5G13930.1 Chalcone and stilbene synthase family protein3.5e-3350.39Show/hide
Query:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST
        +G  + L +++P  +  NI K L +A  P GI+++NSLF+  HPGG A+LD++E KLGL++ K+  +R+VL EYGNM  + V F+LDE R+KS ++G +T
Subjt:  MGCLYQLSRNIPKYVGGNIKKCLGDAI-PSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKST

Query:  TGDGLECGVLVTLGPGLTIETLILQSVPI
        TG+GLE GVL   GPGLT+ET++L SVP+
Subjt:  TGDGLECGVLVTLGPGLTIETLILQSVPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTTGTACCAATTATCACGAAATATACCAAAATACGTTGGTGGAAACATTAAGAAATGCTTGGGTGATGCAATCCCAAGTGGGATCAATGAGTATAACTCGTT
GTTCTATGCAATCCATCCAGGGGGTCGAGCAGTTCTTGATGAAATAGAGCAAAAGCTTGGGCTTGAAAAGGGCAAATTGGAAGTGAGTAGGTATGTGCTTCGTGAGTATG
GTAATATGATGGGCTCAACTGTTGGATTTGTTTTAGATGAGACGAGGAAGAAGTCAATAAGAGAAGGAAAAAGCACTACAGGTGATGGATTAGAGTGTGGTGTGCTTGTG
ACTCTTGGACCTGGTCTCACTATAGAGACTCTCATATTGCAAAGTGTCCCTATAGCTCAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTTGTACCAATTATCACGAAATATACCAAAATACGTTGGTGGAAACATTAAGAAATGCTTGGGTGATGCAATCCCAAGTGGGATCAATGAGTATAACTCGTT
GTTCTATGCAATCCATCCAGGGGGTCGAGCAGTTCTTGATGAAATAGAGCAAAAGCTTGGGCTTGAAAAGGGCAAATTGGAAGTGAGTAGGTATGTGCTTCGTGAGTATG
GTAATATGATGGGCTCAACTGTTGGATTTGTTTTAGATGAGACGAGGAAGAAGTCAATAAGAGAAGGAAAAAGCACTACAGGTGATGGATTAGAGTGTGGTGTGCTTGTG
ACTCTTGGACCTGGTCTCACTATAGAGACTCTCATATTGCAAAGTGTCCCTATAGCTCAAGTTTAA
Protein sequenceShow/hide protein sequence
MGCLYQLSRNIPKYVGGNIKKCLGDAIPSGINEYNSLFYAIHPGGRAVLDEIEQKLGLEKGKLEVSRYVLREYGNMMGSTVGFVLDETRKKSIREGKSTTGDGLECGVLV
TLGPGLTIETLILQSVPIAQV