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Lag0029189 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029189
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr8:36251872..36252839
RNA-Seq ExpressionLag0029189
SyntenyLag0029189
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]1.7e-2436.89Show/hide
Query:  EEVQTHNDETDGRLPNGKYKKADQSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLG
        +E+   N +   +LP        ++G KSF+Q Q ELK   G DIGPVDLF +SH+ EK+G +N+ A++ Y  M  ++KA +++G E ++QP+  ++VLG
Subjt:  EEVQTHNDETDGRLPNGKYKKADQSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLG

Query:  TRSGHIRGLGWDP-----KSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQS
         R  H++GLG+ P     K GSS +V+SS   EKELE+KVE M+ EM  +K+  +                      LK     WE RW +I      + 
Subjt:  TRSGHIRGLGWDP-----KSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQS

Query:  GGGSSN
        G G SN
Subjt:  GGGSSN

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]1.1e-2845.25Show/hide
Query:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS
        ++G KSFVQ Q E+K   G D+  VDLF  SHF EK+GW+NN AK+ YLEM  +++AS ++    +S  +V KQVLG RSG+I+GLG +PK  SS SV+S
Subjt:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS

Query:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN
            +KELE+K+E M+ EM  +K+  E M              +   +AL S+  MWE RWA+IQ++ G   G  G SN
Subjt:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.1e-2845.25Show/hide
Query:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS
        ++G KSFVQ Q E+K   G D+  VDLF  SHF EK+GW+NN AK+ YLEM  +++AS ++    +S  +V KQVLG RSG+I+GLG +PK  SS SV+S
Subjt:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS

Query:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN
            +KELE+K+E M+ EM  +K+  E M              +   +AL S+  MWE RWA+IQ++ G   G  G SN
Subjt:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]1.6e-1436.31Show/hide
Query:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS
        ++G KSFVQ Q E+K   G D+  VDLF  SHF EK+GW+NN AK+ YLEM  +++AS ++                           DP   SSV    
Subjt:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS

Query:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN
            +KELE+K+E M+ EM  +K+  E M              +   +AL S+  MWE RWA+IQ++ G   G  G SN
Subjt:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.1e-2845.25Show/hide
Query:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS
        ++G KSFVQ Q E+K   G D+  VDLF  SHF EK+GW+NN AK+ YLEM  +++AS ++    +S  +V KQVLG RSG+I+GLG +PK  SS SV+S
Subjt:  QSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSS

Query:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN
            +KELE+K+E M+ EM  +K+  E M              +   +AL S+  MWE RWA+IQ++ G   G  G SN
Subjt:  SNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG-GGSSN

TrEMBL top hitse value%identityAlignment
A0A5A7SWX9 DUF4218 domain-containing protein2.5e-1337.11Show/hide
Query:  EVQTHNDETDGRLPNGKYKKADQ----SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQ
        EV+T++     R  N + + A +    +G KSF+Q + ELK+  G D+  +++FH++HF EK GWIN+KAK+ YLEM  I+  S+E G + IS     + 
Subjt:  EVQTHNDETDGRLPNGKYKKADQ----SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQ

Query:  VLGTRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEM
        VLG+RS        +P+SG S+  + S+ REKE        ++EM  LK   E +  E+
Subjt:  VLGTRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEM

A0A5A7SWX9 DUF4218 domain-containing protein3.4e-0262.16Show/hide
Query:  YGISPSYSQWVHHGEPPNLARFHRDTNSSVDDELSRE
        YGIS  Y++WV+HGE  NLARF R   SS  D LSRE
Subjt:  YGISPSYSQWVHHGEPPNLARFHRDTNSSVDDELSRE

A0A5A7SWX9 DUF4218 domain-containing protein2.6e-1033.92Show/hide
Query:  GCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSSN
        G KSF+Q + EL++  G D+  V++F ++HF EK GWIN+KAK+ Y     I+  S+E G + IS     K VLG+ S  I  L    KSG S+  + S+
Subjt:  GCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSSN

Query:  PREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG
         REKE        ++EM  LK   E +  E+                       WE RW  I+   G + G
Subjt:  PREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQSG

A0A5A7TRX4 DUF4216 domain-containing protein5.1e-1439.39Show/hide
Query:  SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSS
        +G KSF+Q + ELK+  G+D+  +++FH++HF EK GW N+KAK+ YLEM  I++ S+E G + IS     + VLG+RS        +P+SG S+  + S
Subjt:  SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSS

Query:  NPREKELEQKVEMMQSEMDALKSREEMMHSEM
        + REKE        ++EM  LK   E +  E+
Subjt:  NPREKELEQKVEMMQSEMDALKSREEMMHSEM

A0A5D3E0V3 Uncharacterized protein6.6e-1440.15Show/hide
Query:  SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSS
        +G KSF+Q + ELK+  G D+  +++FH++HF EK GWIN+KAK+ YLEM  I+  S+E G + IS     + VLG+RS        +P+SG S+  + S
Subjt:  SGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSS

Query:  NPREKELEQKVEMMQSEMDALKSREEMMHSEM
        + REKE        ++EM  LK   E +  E+
Subjt:  NPREKELEQKVEMMQSEMDALKSREEMMHSEM

A0A6J1DUH3 uncharacterized protein LOC1110232128.3e-2536.89Show/hide
Query:  EEVQTHNDETDGRLPNGKYKKADQSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLG
        +E+   N +   +LP        ++G KSF+Q Q ELK   G DIGPVDLF +SH+ EK+G +N+ A++ Y  M  ++KA +++G E ++QP+  ++VLG
Subjt:  EEVQTHNDETDGRLPNGKYKKADQSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLEMDGILKASSEQGSEQISQPDVMKQVLG

Query:  TRSGHIRGLGWDP-----KSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQS
         R  H++GLG+ P     K GSS +V+SS   EKELE+KVE M+ EM  +K+  +                      LK     WE RW +I      + 
Subjt:  TRSGHIRGLGWDP-----KSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHRWAKIQHLFGEQS

Query:  GGGSSN
        G G SN
Subjt:  GGGSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGGATATCTCCTTCATACAGTCAATGGGTTCATCATGGAGAACCCCCAAACTTAGCTCGATTTCACAGAGACACGAATTCTTCAGTAGACGACGAGTTAAGTAG
GGAGGAAGTTCAAACTCACAATGATGAGACAGATGGGAGACTCCCGAATGGAAAGTATAAAAAAGCGGATCAAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAAC
TGAAAGAACTACATGGTCATGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAATGGATGGATCAACAACAAAGCAAAAGAAGTATACTTGGAA
ATGGATGGGATACTGAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTATGAAACAGGTTTTGGGAACTCGATCAGGCCACATCAGAGGTCTTGG
TTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAATCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATGGATGCACTCAAGA
GTAGGGAGGAGATGATGCACTCTGAGATGGATGCACTCAAGAGTAGGGAGGAGGTGAGGCAATCTGAAATGATTGCGCTCAAGAGCAAGGATGAGATGTGGGAACATAGA
TGGGCTAAAATCCAACATTTGTTTGGCGAACAATCGGGAGGAGGGTCTTCAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGGATATCTCCTTCATACAGTCAATGGGTTCATCATGGAGAACCCCCAAACTTAGCTCGATTTCACAGAGACACGAATTCTTCAGTAGACGACGAGTTAAGTAG
GGAGGAAGTTCAAACTCACAATGATGAGACAGATGGGAGACTCCCGAATGGAAAGTATAAAAAAGCGGATCAAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAAC
TGAAAGAACTACATGGTCATGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAATGGATGGATCAACAACAAAGCAAAAGAAGTATACTTGGAA
ATGGATGGGATACTGAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTATGAAACAGGTTTTGGGAACTCGATCAGGCCACATCAGAGGTCTTGG
TTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAATCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATGGATGCACTCAAGA
GTAGGGAGGAGATGATGCACTCTGAGATGGATGCACTCAAGAGTAGGGAGGAGGTGAGGCAATCTGAAATGATTGCGCTCAAGAGCAAGGATGAGATGTGGGAACATAGA
TGGGCTAAAATCCAACATTTGTTTGGCGAACAATCGGGAGGAGGGTCTTCAAACTGA
Protein sequenceShow/hide protein sequence
MYGISPSYSQWVHHGEPPNLARFHRDTNSSVDDELSREEVQTHNDETDGRLPNGKYKKADQSGCKSFVQKQEELKELHGHDIGPVDLFHDSHFTEKNGWINNKAKEVYLE
MDGILKASSEQGSEQISQPDVMKQVLGTRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEMDALKSREEMMHSEMDALKSREEVRQSEMIALKSKDEMWEHR
WAKIQHLFGEQSGGGSSN