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Lag0029204 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029204
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:36482753..36483354
RNA-Seq ExpressionLag0029204
SyntenyLag0029204
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.1e-1731.44Show/hide
Query:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP-----------------------------LTRVIWW---------
        MVK+D   WRFTG YG+ V   R ++W+LI RL++  + PW+LGGDFNEIL                                 +  +  W         
Subjt:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP-----------------------------LTRVIWW---------

Query:  IW-------------------AIRRACILGGDRR---AKAMGLRKGSIVASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSN
        IW                    IR    L  D R   A+ +G+ + ++         +  R P+   RFEE W +F+EC++I+ + W   G      F  
Subjt:  IW-------------------AIRRACILGGDRR---AKAMGLRKGSIVASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSN

Query:  KIKECLAKLNSWNRRRLGGSLKGAISRKE
        KI  CL +L  WN  RLGGSL+GAI RKE
Subjt:  KIKECLAKLNSWNRRRLGGSLKGAISRKE

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]3.0e-2336.13Show/hide
Query:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRAC---------ILGGDRRAKAMGLRKGSIVAS
        ++ D  G WRFTGFYGNP T +R  SWKL+ERL   ++ PW++GGDFNEI+        +    +  R C         ++      K + L+   +   
Subjt:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRAC---------ILGGDRRAKAMGLRKGSIVAS

Query:  LVTDSYQ------NKRMPNG-------VVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRKE
        L++  ++      +  +P          +RFEESW     CRDII   W      GI  F  KI  CL++LN WN+ RL  SLKGAI+ KE
Subjt:  LVTDSYQ------NKRMPNG-------VVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRKE

XP_030924668.1 uncharacterized protein LOC115951644 [Quercus lobata]6.3e-1331.61Show/hide
Query:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRACILGGDR------RAKAMGLRKGSIVAS------LVTDS
        WRFTGFYG+P T  R +SW L+  L+ R   PW+  GDFNEIL            W  R    + G R      R K +G+       S      L  DS
Subjt:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRACILGGDR------RAKAMGLRKGSIVAS------LVTDS

Query:  YQNKRMPNG-VVRFEESWTNFKECRDIIDQHW-KDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRK
          N+    G   RFE  W   + C +++   W K+   A    F++KI  C + L  WN +++ G ++ ++ +K
Subjt:  YQNKRMPNG-VVRFEESWTNFKECRDIIDQHW-KDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRK

XP_030938668.1 uncharacterized protein LOC115963692 [Quercus lobata]5.7e-1432.8Show/hide
Query:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEIL--------LERPLTRVI----------WWIWAIR----RACILGGDRRAKAMGLRKG
        WR TGFYG P  +R+++SW+L++ L++R   PWL  GDFNEIL        L +PL  ++          WWIW  R    RAC    + R K   ++  
Subjt:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEIL--------LERPLTRVI----------WWIWAIR----RACILGGDRRAKAMGLRKG

Query:  SIVAS-------LVTDSYQ-----NKRMPNGVVRFEESWTNFKECRDIIDQHWKD--SGAAGIGNFSNKIKECLAKLNSWNRRRLG
         + AS       LVT   +      K++P+   RFEE W    +C +II   W       + +     KIK C   L  W+R   G
Subjt:  SIVAS-------LVTDSYQ-----NKRMPNGVVRFEESWTNFKECRDIIDQHWKD--SGAAGIGNFSNKIKECLAKLNSWNRRRLG

XP_031121072.1 uncharacterized protein LOC116024317 [Ipomoea triloba]8.2e-1330.05Show/hide
Query:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLE--------------RPLTRVI----------------W--------WIWAIRRAC
        WRFTG+YGNP  +RRRDSW L+   ++    PW++ GDFN++LLE              R    V+                W        W+       
Subjt:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLE--------------RPLTRVI----------------W--------WIWAIRRAC

Query:  ILGGDRRAKAMGLRKGSIVAS--------LVTD---SYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGG
        ++ GD R    G R  S+           L+TD   + Q +R P    RFE  W    ECR +I   W      GIG   N++ EC   + +W RR+  G
Subjt:  ILGGDRRAKAMGLRKGSIVAS--------LVTD---SYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGG

Query:  SLK
        +L+
Subjt:  SLK

TrEMBL top hitse value%identityAlignment
A0A1R3H2R0 Reverse transcriptase8.9e-1327.54Show/hide
Query:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP----LTRVIWWIWAIRRA--------CILGGDRRA------------------
        WRFTGFYG PV  RR +SW L+  L+++ + PWL  GD+NEIL          R   +I A R           ++ G +                    
Subjt:  WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP----LTRVIWWIWAIRRA--------CILGGDRRA------------------

Query:  ------KAMGLRKGSIVASLVTD----------SYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLK
              K         + S+++D           ++N +    V RFE  W    E ++++   W+   A G  N   KI+ C A L+ W+ +R+ G++K
Subjt:  ------KAMGLRKGSIVASLVTD----------SYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLK

Query:  GAISRKE
         AI RK+
Subjt:  GAISRKE

A0A2N9I611 Uncharacterized protein1.0e-1330.17Show/hide
Query:  VKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRACILGGDRRAKAMG------LRKGSIVAS----
        +K   G WRFTGFYG+P T +R+ SW L++ L      PW+  GDFNEIL       V W     R      G R  +  G      + K +++ +    
Subjt:  VKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRACILGGDRRAKAMG------LRKGSIVAS----

Query:  ----------LVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFS--NKIKECLAKLNSWNRRRLG
                  L+ +    KR P  + RFE++WT  +EC  +I   W+D+ +     F    K+K C  +L  W++   G
Subjt:  ----------LVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFS--NKIKECLAKLNSWNRRRLG

A0A6J1DRA0 uncharacterized protein LOC1110224235.4e-1831.44Show/hide
Query:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP-----------------------------LTRVIWW---------
        MVK+D   WRFTG YG+ V   R ++W+LI RL++  + PW+LGGDFNEIL                                 +  +  W         
Subjt:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERP-----------------------------LTRVIWW---------

Query:  IW-------------------AIRRACILGGDRR---AKAMGLRKGSIVASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSN
        IW                    IR    L  D R   A+ +G+ + ++         +  R P+   RFEE W +F+EC++I+ + W   G      F  
Subjt:  IW-------------------AIRRACILGGDRR---AKAMGLRKGSIVASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSN

Query:  KIKECLAKLNSWNRRRLGGSLKGAISRKE
        KI  CL +L  WN  RLGGSL+GAI RKE
Subjt:  KIKECLAKLNSWNRRRLGGSLKGAISRKE

A0A6J1DUG8 uncharacterized protein LOC1110241351.5e-2336.13Show/hide
Query:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRAC---------ILGGDRRAKAMGLRKGSIVAS
        ++ D  G WRFTGFYGNP T +R  SWKL+ERL   ++ PW++GGDFNEI+        +    +  R C         ++      K + L+   +   
Subjt:  MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRAC---------ILGGDRRAKAMGLRKGSIVAS

Query:  LVTDSYQ------NKRMPNG-------VVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRKE
        L++  ++      +  +P          +RFEESW     CRDII   W      GI  F  KI  CL++LN WN+ RL  SLKGAI+ KE
Subjt:  LVTDSYQ------NKRMPNG-------VVRFEESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRKE

A0A7N2LGY8 zf-CCHC_4 domain-containing protein6.2e-1431.76Show/hide
Query:  MVKDDLGW-WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILL------ERPLTRVIWWIWAIRRACILGGDRRAKAMGLR-----KGSI
        ++ +D G+ WR TGFY NP   RR++SW L++ L+ + + PWL  GDFNEI L      E    R  W I  + +  I       K M +          
Subjt:  MVKDDLGW-WRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILL------ERPLTRVIWWIWAIRRACILGGDRRAKAMGLR-----KGSI

Query:  VASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDS-GAAGIGNFSNKIKECLAKLNSWNRRRL
         A L+TDS  ++R     ++FE  WT   + RDII   W DS            +++C  +L+ WN+ ++
Subjt:  VASLVTDSYQNKRMPNGVVRFEESWTNFKECRDIIDQHWKDS-GAAGIGNFSNKIKECLAKLNSWNRRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAAGACGATTTAGGTTGGTGGAGGTTTACCGGCTTCTACGGGAATCCCGTGACTAGAAGGAGAAGGGATTCTTGGAAGCTAATCGAGAGGTTGAATGCCCGTTT
AGAGTTTCCTTGGTTGTTGGGAGGAGACTTCAACGAAATCCTCTTAGAGAGGCCATTGACACGAGTAATTTGGTGGATCTGGGCTATTCGGCGAGCTTGTATACTTGGAG
GAGATCGCAGGGCAAAGGCAATGGGGTTAAGGAAAGGCTCGATAGTGGCTAGCCTAGTCACTGACTCGTACCAAAATAAGAGAATGCCCAACGGAGTGGTGAGATTCGAA
GAAAGCTGGACGAATTTTAAGGAGTGCAGGGACATTATCGATCAACATTGGAAGGACTCGGGAGCAGCTGGAATAGGTAACTTCAGCAACAAGATTAAGGAGTGCTTGGC
TAAATTGAACAGCTGGAACAGAAGAAGGTTGGGAGGCTCTCTTAAGGGGGCAATCTCGAGGAAAGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAAGACGATTTAGGTTGGTGGAGGTTTACCGGCTTCTACGGGAATCCCGTGACTAGAAGGAGAAGGGATTCTTGGAAGCTAATCGAGAGGTTGAATGCCCGTTT
AGAGTTTCCTTGGTTGTTGGGAGGAGACTTCAACGAAATCCTCTTAGAGAGGCCATTGACACGAGTAATTTGGTGGATCTGGGCTATTCGGCGAGCTTGTATACTTGGAG
GAGATCGCAGGGCAAAGGCAATGGGGTTAAGGAAAGGCTCGATAGTGGCTAGCCTAGTCACTGACTCGTACCAAAATAAGAGAATGCCCAACGGAGTGGTGAGATTCGAA
GAAAGCTGGACGAATTTTAAGGAGTGCAGGGACATTATCGATCAACATTGGAAGGACTCGGGAGCAGCTGGAATAGGTAACTTCAGCAACAAGATTAAGGAGTGCTTGGC
TAAATTGAACAGCTGGAACAGAAGAAGGTTGGGAGGCTCTCTTAAGGGGGCAATCTCGAGGAAAGAAGCATAG
Protein sequenceShow/hide protein sequence
MVKDDLGWWRFTGFYGNPVTRRRRDSWKLIERLNARLEFPWLLGGDFNEILLERPLTRVIWWIWAIRRACILGGDRRAKAMGLRKGSIVASLVTDSYQNKRMPNGVVRFE
ESWTNFKECRDIIDQHWKDSGAAGIGNFSNKIKECLAKLNSWNRRRLGGSLKGAISRKEA