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Lag0029205 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029205
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:36484726..36486137
RNA-Seq ExpressionLag0029205
SyntenyLag0029205
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAH93171.1 Os05g0434000 [Oryza sativa Japonica Group]8.5e-3139.6Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID
        F  IK K+W  +QGW+  + S+ GKE+L+KA    I TY  +CF L++VL+ KYF DG+ L+       S TWRSIL G  L KEGL WR+G G  V I 
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID

Query:  QDPWIGSSCNKTLVWVSENLKGRRVLELLD-NQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRD---EASG
         DPW+     +  +    N    +V+EL+D   G W E ++ D F P++A  I+    ++    D   WH + KG F VKSA+ LAV +  ++   +ASG
Subjt:  QDPWIGSSCNKTLVWVSENLKGRRVLELLD-NQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRD---EASG

Query:  KA
         +
Subjt:  KA

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-3031.54Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK-------------------------------------------------------
        F  IK+++WK LQGWK  +FS GGKEVLIKA    I  Y  +CF+                                                       
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK-------------------------------------------------------

Query:  ----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLELL
                        LSRVL+G+YFKD +F+  ++  NPS  WRSIL GR L K+GLRWRIGNG  VFI  D W+ +     ++         RV  L+
Subjt:  ----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLELL

Query:  DN-QGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFW
        D+ +G W+ D++ D F PDEA  I+ +P       D +IW+    G + V+S + +A++ +   +A   +    VR +W
Subjt:  DN-QGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFW

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.5e-3232.69Show/hide
Query:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK------------------------------------------------------
        +F  I +++WK LQGWKG +FS GGKEVLIK     I  Y  +CFK                                                      
Subjt:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK------------------------------------------------------

Query:  -----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLEL
                         L++ LRGKYFK G+FL+ +LG+ PS  WRSIL GR LFK+G RW++GNG  + +  DPW+    N + V+   +++   V  L
Subjt:  -----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLEL

Query:  LDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVIL
        ++ +G W E  + +SF+  EAD I++ P  +    DEIIW  +  G F V+SA++L + L
Subjt:  LDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVIL

XP_030936391.1 uncharacterized protein LOC115961572 [Quercus lobata]3.2e-3031.82Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKATIL---TYMTNCFKLS-----------------------------------------------------
        F  IKEK+ K L GWK  + S+ GKE+LIKA  L   TY  +CFKL                                                      
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKATIL---TYMTNCFKLS-----------------------------------------------------

Query:  ------------------RVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENL-KGRRVLEL
                          RVL+ KYF    F+   LG+NPS +WRSI+  ++L KEGL+WR+GNG  + + +D W+ +  +  ++     L    RV +L
Subjt:  ------------------RVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENL-KGRRVLEL

Query:  LDNQ-GLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFWRYLNSI
        LD++ G W+ ++I   FLP EAD I  +P       D++IW E P G F V+SA+ LAV L +       +  S +R FWR + SI
Subjt:  LDNQ-GLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFWRYLNSI

XP_030939658.1 uncharacterized protein LOC115964500 [Quercus lobata]2.7e-2931.12Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKATIL---TYMTNCFKLS-----------------------------------------------------
        F  IKEK+ K L GWK  + S+ GKE+LIKA  L   TY  +CFKL                                                      
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKATIL---TYMTNCFKLS-----------------------------------------------------

Query:  ------------------RVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKG-RRVLEL
                          RVL+ KYF    F+   LG+NPS +WRSI+  ++L K+GL+WR+GNG  + + +D W+ +  +  ++     L    RV +L
Subjt:  ------------------RVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKG-RRVLEL

Query:  LDNQ-GLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFWRYLNSI
        LD++ G W+ ++I   FLP EAD I  +P       D++IW + P G F V+SA+ LAV L +       +  S +R FWR + SI
Subjt:  LDNQ-GLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFWRYLNSI

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189547.0e-3131.54Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK-------------------------------------------------------
        F  IK+++WK LQGWK  +FS GGKEVLIKA    I  Y  +CF+                                                       
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK-------------------------------------------------------

Query:  ----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLELL
                        LSRVL+G+YFKD +F+  ++  NPS  WRSIL GR L K+GLRWRIGNG  VFI  D W+ +     ++         RV  L+
Subjt:  ----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLELL

Query:  DN-QGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFW
        D+ +G W+ D++ D F PDEA  I+ +P       D +IW+    G + V+S + +A++ +   +A   +    VR +W
Subjt:  DN-QGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFW

A0A6J1DRA0 uncharacterized protein LOC1110224232.2e-3232.69Show/hide
Query:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK------------------------------------------------------
        +F  I +++WK LQGWKG +FS GGKEVLIK     I  Y  +CFK                                                      
Subjt:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFK------------------------------------------------------

Query:  -----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLEL
                         L++ LRGKYFK G+FL+ +LG+ PS  WRSIL GR LFK+G RW++GNG  + +  DPW+    N + V+   +++   V  L
Subjt:  -----------------LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKTLVWVSENLKGRRVLEL

Query:  LDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVIL
        ++ +G W E  + +SF+  EAD I++ P  +    DEIIW  +  G F V+SA++L + L
Subjt:  LDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVIL

A0A803PC16 Uncharacterized protein2.0e-3029.69Show/hide
Query:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLI--KATILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID
        +FG+IKEK+W +L  W+  +FS GGKE L+  +A +L    N   LSR+L+ +YF+  +FL   LGS PS+TWR I+ G+ L  +GLRW++GNG  +   
Subjt:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLI--KATILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID

Query:  QDPWIGSSCNKTLVWVSENLKGRRVLELLDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEAS-----
          PW+    +   +    N    +V +L+ N   W   ++   FLP +   I  +P    ++ D +IWH    G + VKS + LA  L  +   S     
Subjt:  QDPWIGSSCNKTLVWVSENLKGRRVLELLDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEAS-----

Query:  --------GKAKESVVRIF-WRYLNS-ISRAVAKNMVELSDKKECDLSSSPMEN-----------------------------QTSRPPWRPPPSGSWKM
                G    S +RIF WR ++  +  A   +   ++D   C L +   E                               T    W  PPSG  K+
Subjt:  --------GKAKESVVRIF-WRYLNS-ISRAVAKNMVELSDKKECDLSSSPMEN-----------------------------QTSRPPWRPPPSGSWKM

Query:  NSDAAWLEDRKVGGIGWVVQ
        N+DAA        G G V++
Subjt:  NSDAAWLEDRKVGGIGWVVQ

A0A803QCG6 Uncharacterized protein6.6e-2930.88Show/hide
Query:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKL-----------------------------SRVLRGKYFKDGNFLRVELGSNPS
        +F  IKEK+WK+L  W   +FS GGKEVL+KA   +I TY  +CFKL                             SR+L+ +YF   +FL   +G +PS
Subjt:  MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKL-----------------------------SRVLRGKYFKDGNFLRVELGSNPS

Query:  VTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCN-KTLVWVSENLKGRRVLELLDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWH
         TW+SI  GR L  +G+R+++GNG  +    DPWI S  N K + +         V  L+  Q +W  +++   F P + ++I+ +P     + D +IWH
Subjt:  VTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCN-KTLVWVSENLKGRRVLELLDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWH

Query:  ENPKGFFMVKSAHNLAVILSNRDEASGKAKESV-------------VRIF-WR-YLNSISRAVAKNMVELSDKKECDLSSSPMEN
         +  G + VKS  +LA  L  +D  S                    +RIF W+ + N +  A A +  ++ D   C L +S  E+
Subjt:  ENPKGFFMVKSAHNLAVILSNRDEASGKAKESV-------------VRIF-WR-YLNSISRAVAKNMVELSDKKECDLSSSPMEN

C7J217 Os05g0434000 protein4.1e-3139.6Show/hide
Query:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID
        F  IK K+W  +QGW+  + S+ GKE+L+KA    I TY  +CF L++VL+ KYF DG+ L+       S TWRSIL G  L KEGL WR+G G  V I 
Subjt:  FGKIKEKIWKVLQGWKGLMFSQGGKEVLIKA---TILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFID

Query:  QDPWIGSSCNKTLVWVSENLKGRRVLELLD-NQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRD---EASG
         DPW+     +  +    N    +V+EL+D   G W E ++ D F P++A  I+    ++    D   WH + KG F VKSA+ LAV +  ++   +ASG
Subjt:  QDPWIGSSCNKTLVWVSENLKGRRVLELLD-NQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRD---EASG

Query:  KA
         +
Subjt:  KA

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003106.8e-0741.67Show/hide
Query:  LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWI
        LSR+LR +YF   + +   +G+ PS  WRSI+ GR L   GL   IG+G    +  D WI
Subjt:  LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-0430.19Show/hide
Query:  LSNRDEASGKAKESVVRIFWRYLNSISRAVAK----NMVELSDKKECDL------------SSSPMENQTSRPPWRPPPSGSWKMNSDAAWLEDRKVGGI
        L N +    KA + V  + WR   + +  V +    N  E+  + E DL             + P  N++S   WRPPP    K N+DA W  D +  GI
Subjt:  LSNRDEASGKAKESVVRIFWRYLNSISRAVAK----NMVELSDKKECDL------------SSSPMENQTSRPPWRPPPSGSWKMNSDAAWLEDRKVGGI

Query:  GWVVQS
        GWV+++
Subjt:  GWVVQS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.8e-0841.67Show/hide
Query:  LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWI
        LSR+LR +YF   + +   +G+ PS  WRSI+ GR L   GL   IG+G    +  D WI
Subjt:  LSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGAAAATCAAGGAGAAAATATGGAAAGTGCTTCAAGGTTGGAAAGGACTCATGTTTTCTCAGGGTGGAAAGGAAGTCTTAATTAAGGCTACGATTCTAACATA
TATGACGAACTGCTTTAAACTCTCAAGAGTGCTCAGAGGGAAATACTTCAAGGATGGAAATTTTCTAAGGGTCGAGCTGGGTTCTAATCCTTCTGTAACGTGGAGAAGCA
TCCTTTGCGGTAGGGCTCTGTTTAAAGAAGGGCTGAGGTGGAGGATTGGAAACGGTAGGAGAGTGTTCATTGACCAAGACCCTTGGATTGGTTCTAGTTGCAATAAAACC
CTCGTGTGGGTCAGCGAGAATTTGAAGGGAAGAAGAGTGTTGGAACTCCTGGACAACCAAGGCCTTTGGAAGGAAGATATTATCTACGATAGTTTCCTCCCTGATGAAGC
TGATGAAATCATGAAAATGCCTAGGATCAACAACAAAAATTGTGATGAGATCATCTGGCACGAGAATCCTAAAGGTTTTTTCATGGTTAAAAGTGCTCATAACTTGGCAG
TGATATTAAGCAATAGGGATGAAGCTTCAGGGAAAGCCAAGGAGTCGGTGGTGCGCATTTTCTGGAGGTATCTTAATAGCATTAGTAGAGCAGTAGCAAAAAATATGGTA
GAGCTATCGGACAAGAAAGAATGTGACCTGAGTTCGTCCCCAATGGAGAACCAGACGAGTCGCCCTCCTTGGAGGCCGCCCCCTTCTGGATCCTGGAAAATGAACTCTGA
CGCAGCATGGTTAGAAGATCGAAAGGTGGGTGGGATTGGTTGGGTTGTACAAAGTATTAGGGAAAAGTATATCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGAAAATCAAGGAGAAAATATGGAAAGTGCTTCAAGGTTGGAAAGGACTCATGTTTTCTCAGGGTGGAAAGGAAGTCTTAATTAAGGCTACGATTCTAACATA
TATGACGAACTGCTTTAAACTCTCAAGAGTGCTCAGAGGGAAATACTTCAAGGATGGAAATTTTCTAAGGGTCGAGCTGGGTTCTAATCCTTCTGTAACGTGGAGAAGCA
TCCTTTGCGGTAGGGCTCTGTTTAAAGAAGGGCTGAGGTGGAGGATTGGAAACGGTAGGAGAGTGTTCATTGACCAAGACCCTTGGATTGGTTCTAGTTGCAATAAAACC
CTCGTGTGGGTCAGCGAGAATTTGAAGGGAAGAAGAGTGTTGGAACTCCTGGACAACCAAGGCCTTTGGAAGGAAGATATTATCTACGATAGTTTCCTCCCTGATGAAGC
TGATGAAATCATGAAAATGCCTAGGATCAACAACAAAAATTGTGATGAGATCATCTGGCACGAGAATCCTAAAGGTTTTTTCATGGTTAAAAGTGCTCATAACTTGGCAG
TGATATTAAGCAATAGGGATGAAGCTTCAGGGAAAGCCAAGGAGTCGGTGGTGCGCATTTTCTGGAGGTATCTTAATAGCATTAGTAGAGCAGTAGCAAAAAATATGGTA
GAGCTATCGGACAAGAAAGAATGTGACCTGAGTTCGTCCCCAATGGAGAACCAGACGAGTCGCCCTCCTTGGAGGCCGCCCCCTTCTGGATCCTGGAAAATGAACTCTGA
CGCAGCATGGTTAGAAGATCGAAAGGTGGGTGGGATTGGTTGGGTTGTACAAAGTATTAGGGAAAAGTATATCTCATAA
Protein sequenceShow/hide protein sequence
MFGKIKEKIWKVLQGWKGLMFSQGGKEVLIKATILTYMTNCFKLSRVLRGKYFKDGNFLRVELGSNPSVTWRSILCGRALFKEGLRWRIGNGRRVFIDQDPWIGSSCNKT
LVWVSENLKGRRVLELLDNQGLWKEDIIYDSFLPDEADEIMKMPRINNKNCDEIIWHENPKGFFMVKSAHNLAVILSNRDEASGKAKESVVRIFWRYLNSISRAVAKNMV
ELSDKKECDLSSSPMENQTSRPPWRPPPSGSWKMNSDAAWLEDRKVGGIGWVVQSIREKYIS