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Lag0029261 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029261
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr8:37007731..37009168
RNA-Seq ExpressionLag0029261
SyntenyLag0029261
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0638750.1 hypothetical protein [Gossypium davidsonii]2.4e-0431.07Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H D AF    SKS IGL++R++ G + A++ ++ +   +P  AEA A L+  +L   M ++++ V+ D  T+IK        +S I + + DI++ ++ 
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FEK
        F+K
Subjt:  FEK

MBA0733287.1 hypothetical protein [Gossypium gossypioides]1.4e-0434.31Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H DAA+    S S  GLV  D  G L A +T++     SP  AEA A LEG +L  ++ +H + ++ D  T+IK   E    +S I + + DI+  + +
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FE
        F+
Subjt:  FE

MBA0733324.1 hypothetical protein [Gossypium gossypioides]2.4e-0429.13Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H DAAF    S+S  G+++RD+ G ++ ++T + +  +SP  AEA+  L+  +L  ++ +  +T+  D  T+IK     +  +S I + + DIK+  +L
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FEK
         ++
Subjt:  FEK

XP_040934791.1 uncharacterized protein LOC121208305 [Gossypium hirsutum]3.7e-0532.38Show/hide
Query:  LILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQ
        + +H DAAF     KS+  LV+RD+ G + A +T++++  ++   AEA A L    L  +M +H +TV  D  T+IK     +Q +S I + + DI+   
Subjt:  LILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQ

Query:  NLFEK
          F++
Subjt:  NLFEK

XP_040938287.1 uncharacterized protein LOC121210790 [Gossypium hirsutum]1.4e-0427.59Show/hide
Query:  SLDDYWQTNPKG---ETHVQSEEDVLGLISKGEELILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRL
        S+D  W   P G   + H          I     + +H DAAF     KS+ GLV+ D    + A +T++++  ++    EA A L    L  +M +H +
Subjt:  SLDDYWQTNPKG---ETHVQSEEDVLGLISKGEELILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRL

Query:  TVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNLFEKTPRPCF
        TV  D  T+IK     +Q +S I + + DI+    +F +   P +
Subjt:  TVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNLFEKTPRPCF

TrEMBL top hitse value%identityAlignment
A0A7J8NLL5 RNase H domain-containing protein (Fragment)2.6e-0428.44Show/hide
Query:  KGEELILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDI
        +G+   +H DAA+     +S  G+++R+K   + A+Q ++ +        EA A L+  +L   + V++LTVL D  T+IK        +S I + + DI
Subjt:  KGEELILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDI

Query:  KAIQNLFEK
        ++++N F++
Subjt:  KAIQNLFEK

A0A7J8TKS6 RNase H domain-containing protein1.1e-0431.07Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H D AF    SKS IGL++R++ G + A++ ++ +   +P  AEA A L+  +L   M ++++ V+ D  T+IK        +S I + + DI++ ++ 
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FEK
        F+K
Subjt:  FEK

A0A7J9BAA2 Uncharacterized protein (Fragment)6.7e-0534.31Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H DAA+    S S  GLV  D  G L A +T++     SP  AEA A LEG +L  ++ +H + ++ D  T+IK   E    +S I + + DI+  + +
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FE
        F+
Subjt:  FE

A0A7J9BCI1 RNase H domain-containing protein1.1e-0429.13Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H DAAF    S+S  G+++RD+ G ++ ++T + +  +SP  AEA+  L+  +L  ++ +  +T+  D  T+IK     +  +S I + + DIK+  +L
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FEK
         ++
Subjt:  FEK

A0A7J9I6Y7 RNase H domain-containing protein2.0e-0433.01Show/hide
Query:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL
        +H DAA+    S+S  GLV  D  G+L A +T++     SP  AEA A  EG +L   + +H + ++ D  T+IK   E    +S I   + DI+  ++ 
Subjt:  LHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDVHRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNL

Query:  FEK
        F++
Subjt:  FEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGTGTCATTTGTATCTCATGGATATTAAAGATCGCTGGTTGAGTTTGGATGATTACTGGCAGACCAACCCGAAAGGTGAGACACATGTTCAGTCTGAGGAAGA
TGTTCTTGGTCTTATTTCAAAAGGTGAAGAGCTTATTTTGCATATCGATGCAGCTTTTATGGGAGCTATGAGCAAAAGTGTTATTGGGCTAGTTATGCGGGATAAATTTG
GTCATCTCCAGGCAGCTCAGACGTTAGTTTCTACGGTTTGTACCTCTCCATTAGGGGCGGAAGCGGTAGCAATGCTAGAAGGGTTTCGCCTGACAAGAACAATGGATGTG
CATCGTTTAACGGTTCTGTCTGATTTCCTGACTTTAATTAAATCTATTAATGAGGAGATCCAATGTGAATCTTGCATTGCCTCGACACTTTGGGATATCAAAGCCATCCA
AAATTTGTTCGAGAAGACTCCGCGGCCATGCTTCGTCGAAGCTCGCACTCATTTCCGCCCGCAGAGATTGGTATCGGTGGCTGAGGCGGAGCGTGGCGGCGCTGAGATCG
AAAGAGTGCTTTTTTTAAATCGGCCCGCGGCTGGTAGAAAACAAAGCGGTGGCGCAACCATCTTCGAGTTACAGCAGCGACAGCGAGAGAGTGAGGGAGACGGGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGTGTCATTTGTATCTCATGGATATTAAAGATCGCTGGTTGAGTTTGGATGATTACTGGCAGACCAACCCGAAAGGTGAGACACATGTTCAGTCTGAGGAAGA
TGTTCTTGGTCTTATTTCAAAAGGTGAAGAGCTTATTTTGCATATCGATGCAGCTTTTATGGGAGCTATGAGCAAAAGTGTTATTGGGCTAGTTATGCGGGATAAATTTG
GTCATCTCCAGGCAGCTCAGACGTTAGTTTCTACGGTTTGTACCTCTCCATTAGGGGCGGAAGCGGTAGCAATGCTAGAAGGGTTTCGCCTGACAAGAACAATGGATGTG
CATCGTTTAACGGTTCTGTCTGATTTCCTGACTTTAATTAAATCTATTAATGAGGAGATCCAATGTGAATCTTGCATTGCCTCGACACTTTGGGATATCAAAGCCATCCA
AAATTTGTTCGAGAAGACTCCGCGGCCATGCTTCGTCGAAGCTCGCACTCATTTCCGCCCGCAGAGATTGGTATCGGTGGCTGAGGCGGAGCGTGGCGGCGCTGAGATCG
AAAGAGTGCTTTTTTTAAATCGGCCCGCGGCTGGTAGAAAACAAAGCGGTGGCGCAACCATCTTCGAGTTACAGCAGCGACAGCGAGAGAGTGAGGGAGACGGGCGGTGA
Protein sequenceShow/hide protein sequence
MNECHLYLMDIKDRWLSLDDYWQTNPKGETHVQSEEDVLGLISKGEELILHIDAAFMGAMSKSVIGLVMRDKFGHLQAAQTLVSTVCTSPLGAEAVAMLEGFRLTRTMDV
HRLTVLSDFLTLIKSINEEIQCESCIASTLWDIKAIQNLFEKTPRPCFVEARTHFRPQRLVSVAEAERGGAEIERVLFLNRPAAGRKQSGGATIFELQQRQRESEGDGR