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Lag0029262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:37011658..37012026
RNA-Seq ExpressionLag0029262
SyntenyLag0029262
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW28288.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.7e-1636.21Show/hide
Query:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQQ
        +D+ W++VI + +G++ YGW++  +S       W EI K  +   + + F +  G  I+FW+DKWC + PL   F  L++L+  + ASI + WDH  GQ 
Subjt:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQQ

Query:  TWDLALCRGLFDRELD
         W+L   R   D ELD
Subjt:  TWDLALCRGLFDRELD

RVW37603.1 putative ribonuclease H protein [Vitis vinifera]4.4e-1633.9Show/hide
Query:  SKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQ
        +K+  W++V+++ +G++ +GW++   +       W EI K  N     + F +  G  IRFW+D WC +V L   FP L+ ++ ++ A++ D WD   GQ
Subjt:  SKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQ

Query:  QTWDLALCRGLFDRELDS
          W+L L RG  D EL+S
Subjt:  QTWDLALCRGLFDRELDS

RVW55455.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.3e-1636.21Show/hide
Query:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQQ
        +D+ W++VI + +G++ YGW++  +S       W EI K  +   + + F +  G  I+FW+D+WC N PL   F  L++L+  + ASI + WDH  GQ 
Subjt:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDH--GQQ

Query:  TWDLALCRGLFDRELD
         W+L   R   D ELD
Subjt:  TWDLALCRGLFDRELD

RVX06643.1 SUN domain-containing protein 1 [Vitis vinifera]5.2e-1735.59Show/hide
Query:  YSKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWD--HG
        + KD+ W+KVI+  +G++ +GW++   S       W EI K  N   + + F +  G  + FW D+WC N  L  +FP LY L+  + A++ + WD   G
Subjt:  YSKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWD--HG

Query:  QQTWDLALCRGLFDRELD
        Q  W+L   RG  D ELD
Subjt:  QQTWDLALCRGLFDRELD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]3.9e-2548.18Show/hide
Query:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDHGQQTW
        +++ WR+VI SI+G D YGW +     + K  PW +IAK+ +AF + V F  N G  + FW DKW  N+PL   FPD++ LS K+ A + DCW+   QTW
Subjt:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDHGQQTW

Query:  DLALCRGLFD
        DLAL RGLFD
Subjt:  DLALCRGLFD

TrEMBL top hitse value%identityAlignment
A0A2N9EXD0 Uncharacterized protein8.6e-1837.07Show/hide
Query:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT
        DS W++VI++ +G +P  W  G  +     S W  I + ++ F+  ++F L CG  IRFW D WC  VPL  AFP L+ ++  K A + D  CW +G   
Subjt:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT

Query:  WDLALCRGLFDRELDS
        WD+   R L D E+++
Subjt:  WDLALCRGLFDRELDS

A0A2N9HFZ0 Uncharacterized protein8.6e-1837.07Show/hide
Query:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT
        DS W++VI++ +G +P  W  G  +     S W  I + ++ F+  ++F L CG  IRFW D WC  VPL  AFP L+ ++  K A + D  CW +G   
Subjt:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT

Query:  WDLALCRGLFDRELDS
        WD+   R L D E+++
Subjt:  WDLALCRGLFDRELDS

A0A2N9IEQ8 Uncharacterized protein8.6e-1837.07Show/hide
Query:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT
        DS W++VI++ +G +P  W  G  +     S W  I + ++ F+  ++F L CG  IRFW D WC  VPL  AFP L+ ++  K A + D  CW +G   
Subjt:  DSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFD--CWDHGQQT

Query:  WDLALCRGLFDRELDS
        WD+   R L D E+++
Subjt:  WDLALCRGLFDRELDS

A0A438JCG0 SUN domain-containing protein 12.5e-1735.59Show/hide
Query:  YSKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWD--HG
        + KD+ W+KVI+  +G++ +GW++   S       W EI K  N   + + F +  G  + FW D+WC N  L  +FP LY L+  + A++ + WD   G
Subjt:  YSKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWD--HG

Query:  QQTWDLALCRGLFDRELD
        Q  W+L   RG  D ELD
Subjt:  QQTWDLALCRGLFDRELD

A0A6J1E196 uncharacterized protein LOC1110250191.9e-2548.18Show/hide
Query:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDHGQQTW
        +++ WR+VI SI+G D YGW +     + K  PW +IAK+ +AF + V F  N G  + FW DKW  N+PL   FPD++ LS K+ A + DCW+   QTW
Subjt:  KDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDHGQQTW

Query:  DLALCRGLFD
        DLAL RGLFD
Subjt:  DLALCRGLFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGGAGGTTTACTCAAAGGACTCTTTTTGGAGAAAAGTGATTATTAGCATTCATGGGGAGGATCCTTATGGTTGGAAATCTGGCAACATCTCGCCTAGAAATAA
AAGTAGCCCCTGGACTGAAATTGCTAAACACTATAATGCCTTCAATCAATTTGTTCGGTTTTCCCTTAATTGTGGGAAAAACATTAGATTTTGGGAAGATAAATGGTGCG
ATAATGTCCCCCTCCAAACAGCCTTTCCGGACCTCTATATGTTGTCTGGGAAGAAAGGCGCCTCTATTTTCGACTGCTGGGATCATGGTCAGCAAACGTGGGATCTAGCT
CTCTGTAGAGGTTTGTTCGACAGGGAGCTTGATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTGGAGGTTTACTCAAAGGACTCTTTTTGGAGAAAAGTGATTATTAGCATTCATGGGGAGGATCCTTATGGTTGGAAATCTGGCAACATCTCGCCTAGAAATAA
AAGTAGCCCCTGGACTGAAATTGCTAAACACTATAATGCCTTCAATCAATTTGTTCGGTTTTCCCTTAATTGTGGGAAAAACATTAGATTTTGGGAAGATAAATGGTGCG
ATAATGTCCCCCTCCAAACAGCCTTTCCGGACCTCTATATGTTGTCTGGGAAGAAAGGCGCCTCTATTTTCGACTGCTGGGATCATGGTCAGCAAACGTGGGATCTAGCT
CTCTGTAGAGGTTTGTTCGACAGGGAGCTTGATAGCTAG
Protein sequenceShow/hide protein sequence
MALEVYSKDSFWRKVIISIHGEDPYGWKSGNISPRNKSSPWTEIAKHYNAFNQFVRFSLNCGKNIRFWEDKWCDNVPLQTAFPDLYMLSGKKGASIFDCWDHGQQTWDLA
LCRGLFDRELDS