CuGenDBv2

Gene ID	Lag0029290
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	transmembrane protein 50A
Genome location	chr8:37304078..37307354
RNA-Seq Expression	Lag0029290
Synteny	Lag0029290
Gene Ontology terms	NA
InterPro domains	IPR007919 - Uncharacterised protein family UPF0220

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7016525.1 hypothetical protein SDJN02_21634 [Cucurbita argyrosperma subsp. argyrosperma]

6.4e-76

74.64

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+EDIDYSPYEEGEWR  D+   +    ++  +G  E     
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                 R     +    S VAN L ICLLKC++V N  DASL+NRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

XP_004140320.1 transmembrane protein 50A [Cucumis sativus]

2.9e-60

64.11

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]

7.6e-61

64.59

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

XP_022993057.1 transmembrane protein 50A [Cucurbita maxima]

1.7e-60

64.11

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

XP_038874577.1 transmembrane protein 50A [Benincasa hispida]

1.0e-60

64.11

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CCJ8 transmembrane protein 50A

3.7e-61

64.59

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

A0A6J1CJN8 transmembrane protein 50A

1.8e-60

63.64

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDS+VKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

A0A6J1FCW9 transmembrane protein 50A-like

4.1e-60

63.64

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+EDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

A0A6J1JRP9 transmembrane protein 50A

8.2e-61

64.11

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

D6BRE9 Transmembrane protein 50a, putative

5.9e-59

61.24

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLFFAYVVSFVSLAASVGLLIQDS+VKTGPSVWTG AGVLQCVFVL+SG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        LIYWTSHSE
Subjt:  LIYWTSHSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G36980.1 unknown protein

6.5e-58

56.94

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Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII
        MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEW                           
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNII

Query:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG
                                                       RLKLWLF AYVV+FVSLAASVGLLIQDSVVKTGPS WTGVAGV QCVFVL+SG
Subjt:  HKRGFELSRRFDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSG

Query:  LIYWTSHSE
        L+YWTSHSE
Subjt:  LIYWTSHSE

Sequences

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CDS sequence

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ATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCAGGTGTCGCCGGAGCTGTGTTCGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTATGCAGTTCTGTTGCCGT
ATCCTTCGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTCTGATGTTCAATTGCGTTCGGAAAGAAGACATCGATTATTCTCCATACGAGGAAGGCGAATGGA
GAGGTTGTGATTCTCAAGAGCTAAGGGGTACAAAGAAAAGTGTTCACCATATTGGGGATCTTGAAATTCCAAATATAATTCACAAAAGGGGATTTGAACTTAGCAGGAGG
TTTGATAAGAAGCCATGGTTTCCGGATGACAGCCCAGTAGCAAATGCTCTGGATATCTGCTTATTAAAGTGTATTGCTGTAACTAACAACATTGACGCTTCCCTTAACAA
CAGGTTGAAGCTTTGGCTCTTCTTTGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCGGTAGTAAAAACTGGCCCATCAGTGT
GGACAGGAGTTGCAGGAGTATTGCAGTGCGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACTTCTCACTCGGAATAA

mRNA sequence

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Protein sequence

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MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRGCDSQELRGTKKSVHHIGDLEIPNIIHKRGFELSRR
FDKKPWFPDDSPVANALDICLLKCIAVTNNIDASLNNRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Lag0029290 (gene) of Sponge gourd (AG-4) v1 genome