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Lag0029308 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029308
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr8:37515096..37515512
RNA-Seq ExpressionLag0029308
SyntenyLag0029308
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5468871.1 hypothetical protein F2P56_012982 [Juglans regia]4.8e-1133.63Show/hide
Query:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC
        + D  +AE YA  K++E   D+     I E D   +  ++N E ED+S  G +I DA        Q   +FV+R+ N+AAH LA+ A++   + VW+E  
Subjt:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC

Query:  PRCLEDVVLNDSM
        P C+E ++L + +
Subjt:  PRCLEDVVLNDSM

XP_018820230.2 uncharacterized protein LOC108990663 [Juglans regia]6.3e-1133.33Show/hide
Query:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC
        V D   A+GYA  K++EF  D+  +  + E D+  +  ++N E + +S  G +I DA        Q   +FV+R  N+AAH LA+ A++ +S+ VW+E  
Subjt:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC

Query:  PRCLEDVVLND
        P C+E ++  +
Subjt:  PRCLEDVVLND

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]4.9e-1642.37Show/hide
Query:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET
        N++ VDMAE   AV+ L+  + +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV REGN+AAH LAR A+      +WME 
Subjt:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET

Query:  CP---------RCLEDVV
         P          CLE++V
Subjt:  CP---------RCLEDVV

XP_022753674.1 uncharacterized protein LOC111301987 [Durio zibethinus]3.1e-1034.21Show/hide
Query:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET
        NV +  M E +AA K+++    M     ILE D+  V   +  ERED+S +G I+AD      +        V R+ N+AAHRLA + +   SDE+W+  
Subjt:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET

Query:  CPRCLEDVVLNDSM
        CP    ++V+ +S+
Subjt:  CPRCLEDVVLNDSM

XP_042939569.1 uncharacterized protein LOC122274612 [Carya illinoinensis]2.2e-1135.77Show/hide
Query:  VTVKSLEVNVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQW
        V V   + +V D  +AE  A  K+LE   D+ +   I E D+  V   +NRE ED+S +G +I D  + F  N     QF HRE N  AH LAR A+   
Subjt:  VTVKSLEVNVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQW

Query:  SDEVWMETCPRCLEDVVLNDSMY
          +VW+E  P  +   + +D +Y
Subjt:  SDEVWMETCPRCLEDVVLNDSMY

TrEMBL top hitse value%identityAlignment
A0A2I4ELF3 uncharacterized protein LOC1089906633.0e-1133.33Show/hide
Query:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC
        V D   A+GYA  K++EF  D+  +  + E D+  +  ++N E + +S  G +I DA        Q   +FV+R  N+AAH LA+ A++ +S+ VW+E  
Subjt:  VRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC

Query:  PRCLEDVVLND
        P C+E ++  +
Subjt:  PRCLEDVVLND

A0A5C7IC42 Uncharacterized protein2.0e-1035.85Show/hide
Query:  MAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETCPRCLE
        MAE  A ++ L+FV + GL P I+++DS  V  ++N     + ++G+ IAD L     +L +LF FV R   +AAH LA++ ++  +D  WME  P  + 
Subjt:  MAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETCPRCLE

Query:  DVVLND
         +V+ D
Subjt:  DVVLND

A0A6J1C467 uncharacterized protein LOC1110077752.6e-1035.61Show/hide
Query:  LLMEATLIEHVTVKSLEVNVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQA
        L+ ++T+   ++      +V DV +AE  AA + +    + GL P  +ETDSS+VF +L  + ED SE+G ++A ++    S+L +   F FV+REGN  
Subjt:  LLMEATLIEHVTVKSLEVNVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQA

Query:  AHRLARLAIAQWSDEVWMETCPRCLEDVVLND
        AH LAR+ +   S  VW+E     L +V+  D
Subjt:  AHRLARLAIAQWSDEVWMETCPRCLEDVVLND

A0A6J1CIF1 uncharacterized protein LOC1110112372.4e-1642.37Show/hide
Query:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET
        N++ VDMAE   AV+ L+  + +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV REGN+AAH LAR A+      +WME 
Subjt:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET

Query:  CP---------RCLEDVV
         P          CLE++V
Subjt:  CP---------RCLEDVV

A0A6P5ZLI0 uncharacterized protein LOC1113019871.5e-1034.21Show/hide
Query:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET
        NV +  M E +AA K+++    M     ILE D+  V   +  ERED+S +G I+AD      +        V R+ N+AAHRLA + +   SDE+W+  
Subjt:  NVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMET

Query:  CPRCLEDVVLNDSM
        CP    ++V+ +S+
Subjt:  CPRCLEDVVLNDSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTATTGATGGAAGCCACCTTAATTGAGCATGTGACCGTGAAAAGCTTAGAAGTTAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGCTT
GGAGTTCGTGGCAGATATGGGTTTGGCTCCGACAATTCTTGAGACGGATTCGAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGA
TTATTGCAGATGCACTAATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCC
CAGTGGAGTGATGAGGTTTGGATGGAGACTTGTCCTAGGTGCCTGGAGGACGTGGTTTTGAACGATTCAATGTACATGGAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTATTGATGGAAGCCACCTTAATTGAGCATGTGACCGTGAAAAGCTTAGAAGTTAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGCTT
GGAGTTCGTGGCAGATATGGGTTTGGCTCCGACAATTCTTGAGACGGATTCGAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGA
TTATTGCAGATGCACTAATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCC
CAGTGGAGTGATGAGGTTTGGATGGAGACTTGTCCTAGGTGCCTGGAGGACGTGGTTTTGAACGATTCAATGTACATGGAGGCATGA
Protein sequenceShow/hide protein sequence
MFLLMEATLIEHVTVKSLEVNVRDVDMAEGYAAVKSLEFVADMGLAPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIA
QWSDEVWMETCPRCLEDVVLNDSMYMEA