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Lag0029390 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029390
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr8:38491929..38492366
RNA-Seq ExpressionLag0029390
SyntenyLag0029390
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6628833.1 hypothetical protein CIPAW_14G039600 [Carya illinoinensis]5.4e-1328.47Show/hide
Query:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW
        +D+++W P + G F VKS Y L  + I +K+   S  +K+  +WK +W  +V   VK+  WK+   ++P K N+ +  VS + +C    +  ET  H+IW
Subjt:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW

Query:  DCKSPMN-FIPKSLNFLDVCRDNWSALDHWSWMVDNL
         C +  + +          C   W   + W+ M   L
Subjt:  DCKSPMN-FIPKSLNFLDVCRDNWSALDHWSWMVDNL

XP_011459636.1 PREDICTED: uncharacterized protein LOC105350012 [Fragaria vesca subsp. vesca]2.2e-1433.81Show/hide
Query:  KSTKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNH
        +S  D+ IW PD KG+FMVKS YH+A   +L+        N    LW  +W   V  +VK+  WK+ SNI+P++S + + G+ ++  C F  +  E+  H
Subjt:  KSTKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNH

Query:  LIWDCKSPMNFIPKSLNFLDVCRDNWSALDHWSWMVDNL
         + DC     FI   L  + +   + +ALD   W+V +L
Subjt:  LIWDCKSPMNFIPKSLNFLDVCRDNWSALDHWSWMVDNL

XP_018829825.2 uncharacterized protein LOC108997893 [Juglans regia]1.4e-1333.96Show/hide
Query:  STKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHL
        +T+D IIWH  + G F VKS YHL  D  +      S  N +  +WK +W  +V P  K   W+     +P +SN+ K+ V  +PLC    +  E+  H+
Subjt:  STKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHL

Query:  IWDCKS
        +W C++
Subjt:  IWDCKS

XP_030478186.1 uncharacterized protein LOC115695246 [Cannabis sativa]3.5e-1235.64Show/hide
Query:  DEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIWD
        D +IW+ ++ GIF VKS YH+A +  L   +S S F+  +  WK+LWT N+ P++K  +W++  +I+P   N+        P C+F     ET  H + D
Subjt:  DEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIWD

Query:  C
        C
Subjt:  C

XP_042952198.1 uncharacterized protein LOC122289281 [Carya illinoinensis]3.5e-1235.24Show/hide
Query:  KSTKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNH
        +   D  IW   +KGIF V+S Y + +D   +K    S  N+    W ++W   VI +VK   WK +SN++P K N+ K+ +  +PLC    +  ETT H
Subjt:  KSTKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNH

Query:  LIWDC
         +W+C
Subjt:  LIWDC

TrEMBL top hitse value%identityAlignment
A0A2N9F647 Uncharacterized protein5.6e-1635.92Show/hide
Query:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW
        +D +IW   +KGIF VKS Y++ +      +A  S   ++ T WK+LW+T V P+VK+ AW+   NI+P K+ + ++G++    C++  +  ETT+H++W
Subjt:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW

Query:  DCK
         C+
Subjt:  DCK

A0A2N9FYH3 CCHC-type domain-containing protein8.1e-1533.98Show/hide
Query:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW
        +D +IW   +KGIF VKS Y++ +      +A  S   ++   WK+LW+T V P+VK+ AW+   NI+P K+ + ++G++    C++  +  ET +H++W
Subjt:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW

Query:  DCK
         C+
Subjt:  DCK

A0A2N9J5D9 CCHC-type domain-containing protein6.2e-1533.98Show/hide
Query:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW
        +D +IW   +KGIF VKS Y++ +      +A  S   ++   WK+LW+T V P+VK+ AW+   NI+P K+ + ++G++    C++  +  ET +H++W
Subjt:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW

Query:  DCK
         C+
Subjt:  DCK

A0A7N2LQQ2 zf-RVT domain-containing protein2.1e-1527.86Show/hide
Query:  STKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHL
        S++D+++W  +    F VK+ Y +A+    +++   S       +W+ LWT NV P+V++  W+  SN++P   N+ +  ++++P C FY ++ E+  HL
Subjt:  STKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHL

Query:  IWDCKSPMNFIPKSLNFLDVC-RDNWSALDHWSWMVDNLS
        +W+C    N        L  C  D       + W++D LS
Subjt:  IWDCKSPMNFIPKSLNFLDVC-RDNWSALDHWSWMVDNLS

A0A803P5C9 Uncharacterized protein2.4e-1433.58Show/hide
Query:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW
        KDEI+W  D  GIF VKS YHLA  +      S  D +K +  W  +WT+ + P+VK+  W+++S  IP   ++ K+ +  +PLC   +   ET  H + 
Subjt:  KDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIW

Query:  DCKSPMNFIPKSLNFLDVCRDNWSALDHWSWMVD
        DC         S N L   + +   +D + W VD
Subjt:  DCKSPMNFIPKSLNFLDVCRDNWSALDHWSWMVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.3e-0630.36Show/hide
Query:  LWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIWDC
        +W+  + P++K+  WK ++N +P  + +L   +S+ P CT  R ++ET  H++++C
Subjt:  LWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIWDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACAAGAGAGAAGAGCACCAAAGATGAGATCATTTGGCACCCCGATGAAAAAGGAATTTTCATGGTCAAAAGTGTCTACCACCTGGCAATTGACAATATCTTAAA
AAAGAAGGCTTCCCAATCAGACTTTAACAAAATTTATACTCTTTGGAAAAGCTTATGGACCACCAATGTGATTCCTAGAGTTAAAGTCGGTGCATGGAAGATCATCAGCA
ACATAATCCCCAACAAGTCCAATATCCTAAAAGAAGGAGTTTCCGTCAACCCTCTGTGTACATTCTATCGGAAAAACTATGAAACAACAAACCATCTTATTTGGGATTGC
AAATCTCCGATGAATTTTATTCCTAAATCTTTGAATTTCCTTGATGTTTGCAGGGATAATTGGTCAGCTTTGGACCATTGGAGTTGGATGGTAGATAATCTGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGACAAGAGAGAAGAGCACCAAAGATGAGATCATTTGGCACCCCGATGAAAAAGGAATTTTCATGGTCAAAAGTGTCTACCACCTGGCAATTGACAATATCTTAAA
AAAGAAGGCTTCCCAATCAGACTTTAACAAAATTTATACTCTTTGGAAAAGCTTATGGACCACCAATGTGATTCCTAGAGTTAAAGTCGGTGCATGGAAGATCATCAGCA
ACATAATCCCCAACAAGTCCAATATCCTAAAAGAAGGAGTTTCCGTCAACCCTCTGTGTACATTCTATCGGAAAAACTATGAAACAACAAACCATCTTATTTGGGATTGC
AAATCTCCGATGAATTTTATTCCTAAATCTTTGAATTTCCTTGATGTTTGCAGGGATAATTGGTCAGCTTTGGACCATTGGAGTTGGATGGTAGATAATCTGAGCTAG
Protein sequenceShow/hide protein sequence
MLTREKSTKDEIIWHPDEKGIFMVKSVYHLAIDNILKKKASQSDFNKIYTLWKSLWTTNVIPRVKVGAWKIISNIIPNKSNILKEGVSVNPLCTFYRKNYETTNHLIWDC
KSPMNFIPKSLNFLDVCRDNWSALDHWSWMVDNLS