; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029402 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029402
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:38615386..38616854
RNA-Seq ExpressionLag0029402
SyntenyLag0029402
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]4.5e-3030.9Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG
        SL WG+ELL KG+RWRVGNGE + VY + W+P     ++ S   L     V DL T+SGQWN  LL+  F  +EV +IL IPL  + S D +IWH+E+ G
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG

Query:  RLKVGTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAK-FEEL
           V +G        +  L   +  C     GV       K  W     + +  + K+F     G+    L  N+   S +N  R++   V  +   EE 
Subjt:  RLKVGTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAK-FEEL

Query:  VVGAGPSAGLVDWATNYLAVFRGASRTY---------------------GEGVGGVPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRV
         + A    GL +W  + +   +  + T                        G    P++++  W PP  G YK NVD A     S  GVGVVVR+E G  
Subjt:  VVGAGPSAGLVDWATNYLAVFRGASRTY---------------------GEGVGGVPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRV

Query:  MLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS
        M +          +   E +A ++G+R  ++MGF   +LE D+
Subjt:  MLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS

TXG71894.1 hypothetical protein EZV62_000473 [Acer yangbiense]4.5e-3029.26Show/hide
Query:  LLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCGRLKVGTG
        +L +G R R+G+G    +Y   W+P     +V SP  L   + V+ L+ + G+WNE L+R +F P E   IL+IPL   L  D  +WHF K G   V + 
Subjt:  LLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCGRLKVGTG

Query:  LAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLR--DVKDRVDWAKFE---ELVVG
              + I  ++     C +    + R G +T          H  W+CK      +  EW     +    S LN L+  D   RV W       E VV 
Subjt:  LAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLR--DVKDRVDWAKFE---ELVVG

Query:  AGPSAGLVDWATNYLAVFRGASRTYGEG--------VGG-----------VPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAA
           +A LV W     ++FR  ++ +G+          GG           +P   +K WIPP  G  K NVDAA     ++  VG+V+RD  GR++ SAA
Subjt:  AGPSAGLVDWATNYLAVFRGASRTYGEG--------VGG-----------VPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAA

Query:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCK------------------ILRWWICLRYSFTRREGNRVAHELARFAL
        +  +   S+D+AE   + +G+ L    G   + +E+DS    R C                   +L        S+  R  NRVAHE+AR A+
Subjt:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCK------------------ILRWWICLRYSFTRREGNRVAHELARFAL

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]2.9e-2928.68Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG
        SL WG+ELL KG+RWRVGNG  + VY   W+P     ++ SP  L     V DL T+SGQWN  LL+  F  +EV + L IPL  +   D +IWH+E+ G
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG

Query:  RLKVGTGLAKGLCL--------PILHLRLRVR-------------------RC---------LAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM
           V +G  +  CL        P + + L  +                   RC         +   R +             ES +H  W C+   E+  
Subjt:  RLKVGTGLAKGLCL--------PILHLRLRVR-------------------RC---------LAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM

Query:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGE-----------------------GVGGVPRSAVK-
         S W  + +  + NS   L   ++     +  EE  + A    GL  W      +F G S T  +                       G    P++ +  
Subjt:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGE-----------------------GVGGVPRSAVK-

Query:  WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS
        W PP  G YK NVD A     S  GVGVVVR+  G  M +          +   E +A ++G+R  ++MGF   +LE D+
Subjt:  WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.0e-4229.5Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLT-ASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKC
        S++WGR+LL KG+RWR+GNG+ V +YG NW+P+   L++ S   L   +RV+ L+    G W  +++R  F+P E + IL+IP+     ED +IW++EK 
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLT-ASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKC

Query:  GRLKVGTG----LAKGLCLPI------------------LHLRLRVR-------------RCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM
        G   V +G    L    C+                    +H+  +++              C    RGV           +GE  +H+FW CK+   L +
Subjt:  GRLKVGTG----LAKGLCLPI------------------LHLRLRVR-------------RCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM

Query:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP--------------------SAGLVDWATNYLAVFRGASRTYGEGVGGVPRSA-VKWIP
         S++  L       S   +LR+  + +  A FEEL V                           LV+WA  Y   FR A        G V  +A + W P
Subjt:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP--------------------SAGLVDWATNYLAVFRGASRTYGEGVGGVPRSA-VKWIP

Query:  PEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWW---ICLRYSF
        P++G YK N DA++      AG+G+++ ++ G+VM +A    +++ S D+AE +A V+G++L  E+G    + +   +G     K   +W   +   ++F
Subjt:  PEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWW---ICLRYSF

Query:  TRREGNRVAHELARFAL
         +REGN+ AH LAR AL
Subjt:  TRREGNRVAHELARFAL

XP_042944602.1 uncharacterized protein LOC122278481 [Carya illinoinensis]6.9e-3129.8Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPV-TLDPGARVADLLTASGQ-WNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEK
        SL+  ++L+  G+ WRVGNG+ +S++ + W+P+    +VRSP+ TL   ++V+ L+      WNE L+   FS  E   I +IPL     ED ++W F K
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPV-TLDPGARVADLLTASGQ-WNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEK

Query:  CGRLKV------GTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHG--ESCMHVFWQC---------------KYFCE----LLMGSEWEVL
         GR  V      G  + +      L   L  R+ L   + +      T +  HG  E+  HV W C               K+ CE      + S+ +  
Subjt:  CGRLKV------GTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHG--ESCMHVFWQC---------------KYFCE----LLMGSEWEVL

Query:  LQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGEGVGGV--PRSAVKWIPPEKGWYKANVDAAYCGDLSRAGVGVV
        LQ  +   +  +LR +  R +   FE       PS  L +  T+ L  ++ A     +  G +   R   KW+PP++G  K N DAA      R G+G+ 
Subjt:  LQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGEGVGGV--PRSAVKWIPPEKGWYKANVDAAYCGDLSRAGVGVV

Query:  VRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICLRYSFTR----------REGNRVAHELARFALR-
          + VG V+ S + S    GSSD+ E  A+   M LV+E+    V+ E D++      ++++    +R ++ R          REGN VAHELA+ ALR 
Subjt:  VRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICLRYSFTR----------REGNRVAHELARFALR-

Query:  EGGCRW
        EG   W
Subjt:  EGGCRW

TrEMBL top hitse value%identityAlignment
A0A5C7IST2 RNase H domain-containing protein2.2e-3029.26Show/hide
Query:  LLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCGRLKVGTG
        +L +G R R+G+G    +Y   W+P     +V SP  L   + V+ L+ + G+WNE L+R +F P E   IL+IPL   L  D  +WHF K G   V + 
Subjt:  LLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCGRLKVGTG

Query:  LAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLR--DVKDRVDWAKFE---ELVVG
              + I  ++     C +    + R G +T          H  W+CK      +  EW     +    S LN L+  D   RV W       E VV 
Subjt:  LAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLR--DVKDRVDWAKFE---ELVVG

Query:  AGPSAGLVDWATNYLAVFRGASRTYGEG--------VGG-----------VPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAA
           +A LV W     ++FR  ++ +G+          GG           +P   +K WIPP  G  K NVDAA     ++  VG+V+RD  GR++ SAA
Subjt:  AGPSAGLVDWATNYLAVFRGASRTYGEG--------VGG-----------VPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAA

Query:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCK------------------ILRWWICLRYSFTRREGNRVAHELARFAL
        +  +   S+D+AE   + +G+ L    G   + +E+DS    R C                   +L        S+  R  NRVAHE+AR A+
Subjt:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCK------------------ILRWWICLRYSFTRREGNRVAHELARFAL

A0A5E4FZN9 PREDICTED: retrotransposon1.4e-2928.68Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG
        SL WG+ELL KG+RWRVGNG  + VY   W+P     ++ SP  L     V DL T+SGQWN  LL+  F  +EV + L IPL  +   D +IWH+E+ G
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG

Query:  RLKVGTGLAKGLCL--------PILHLRLRVR-------------------RC---------LAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM
           V +G  +  CL        P + + L  +                   RC         +   R +             ES +H  W C+   E+  
Subjt:  RLKVGTGLAKGLCL--------PILHLRLRVR-------------------RC---------LAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM

Query:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGE-----------------------GVGGVPRSAVK-
         S W  + +  + NS   L   ++     +  EE  + A    GL  W      +F G S T  +                       G    P++ +  
Subjt:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVFRGASRTYGE-----------------------GVGGVPRSAVK-

Query:  WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS
        W PP  G YK NVD A     S  GVGVVVR+  G  M +          +   E +A ++G+R  ++MGF   +LE D+
Subjt:  WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS

A0A6J1DAR4 uncharacterized protein LOC1110189541.5e-4229.5Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLT-ASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKC
        S++WGR+LL KG+RWR+GNG+ V +YG NW+P+   L++ S   L   +RV+ L+    G W  +++R  F+P E + IL+IP+     ED +IW++EK 
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLT-ASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKC

Query:  GRLKVGTG----LAKGLCLPI------------------LHLRLRVR-------------RCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM
        G   V +G    L    C+                    +H+  +++              C    RGV           +GE  +H+FW CK+   L +
Subjt:  GRLKVGTG----LAKGLCLPI------------------LHLRLRVR-------------RCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLM

Query:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP--------------------SAGLVDWATNYLAVFRGASRTYGEGVGGVPRSA-VKWIP
         S++  L       S   +LR+  + +  A FEEL V                           LV+WA  Y   FR A        G V  +A + W P
Subjt:  GSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP--------------------SAGLVDWATNYLAVFRGASRTYGEGVGGVPRSA-VKWIP

Query:  PEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWW---ICLRYSF
        P++G YK N DA++      AG+G+++ ++ G+VM +A    +++ S D+AE +A V+G++L  E+G    + +   +G     K   +W   +   ++F
Subjt:  PEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWW---ICLRYSF

Query:  TRREGNRVAHELARFAL
         +REGN+ AH LAR AL
Subjt:  TRREGNRVAHELARFAL

A0A6J5TGK7 CCHC-type domain-containing protein2.2e-3030.9Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG
        SL WG+ELL KG+RWRVGNGE + VY + W+P     ++ S   L     V DL T+SGQWN  LL+  F  +EV +IL IPL  + S D +IWH+E+ G
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG

Query:  RLKVGTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAK-FEEL
           V +G        +  L   +  C     GV       K  W     + +  + K+F     G+    L  N+   S +N  R++   V  +   EE 
Subjt:  RLKVGTGLAKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAK-FEEL

Query:  VVGAGPSAGLVDWATNYLAVFRGASRTY---------------------GEGVGGVPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRV
         + A    GL +W  + +   +  + T                        G    P++++  W PP  G YK NVD A     S  GVGVVVR+E G  
Subjt:  VVGAGPSAGLVDWATNYLAVFRGASRTY---------------------GEGVGGVPRSAVK-WIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRV

Query:  MLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS
        M +          +   E +A ++G+R  ++MGF   +LE D+
Subjt:  MLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDS

M5XJH9 Uncharacterized protein (Fragment)5.2e-3230.61Show/hide
Query:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG
        SLIWG ELL  G+R R+G+G++  VYG  WIP     R  SP  LD   +V+D +   G WN +LL   F   +V++I +IPL     +D  +WH+   G
Subjt:  SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCG

Query:  RLKVGTGL-----AKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQC-KYFCELLMGSEWEVLLQ-------NIQANSMLNLLRDV
           V +G       K  C  ++    + R   A  R V  W  + +     +  ++  W+  K +   +       ++        N+ + S+++ L   
Subjt:  RLKVGTGL-----AKGLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQC-KYFCELLMGSEWEVLLQ-------NIQANSMLNLLRDV

Query:  KD-RVDWAK--FEELVVGAGPS--AGLVDWATNYLAVFRGASRTYGEGVGGVPRSAV----KWIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVM
         + +  W K  F E+  G   S    L + AT YL+  R     YG  V G P+  V    KW PP  G YK NVDA +  +     +GVVVR++ G V 
Subjt:  KD-RVDWAK--FEELVVGAGPS--AGLVDWATNYLAVFRGASRTYGEGVGGVPRSAV----KWIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVM

Query:  LSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICLRYSFTRREGNRVAHELARFAL
        ++ A+      SS  AE +  + G++   +  F+ + +E+DS G     + L+++  +  SF+ R GN+VAH LAR AL
Subjt:  LSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICLRYSFTRREGNRVAHELARFAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-0525.37Show/hide
Query:  AVKWIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICL-
        +V+W  P   W K N DA +  +  R G+G ++R+E G V+   A +     +   AE  A+   +  +    + R+I E+D+           +W  L 
Subjt:  AVKWIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKILRWWICL-

Query:  ----------------RYSFTRREGNRVAHELAR
                        ++ FT R GN+VA  +AR
Subjt:  ----------------RYSFTRREGNRVAHELAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCCTGATTTGGGGGAGGGAGCTATTGGGAAAGGGTATTCGTTGGAGGGTTGGGAATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATTTCTGTCT
CAGGGTACGGTCCCCGGTTACTTTGGATCCTGGTGCTCGAGTGGCTGATCTTCTTACAGCCTCGGGCCAGTGGAATGAGGAACTCCTGCGACATCATTTTAGCCCTCGTG
AGGTACGCTCTATCCTTACTATCCCACTGCGGCATATTTTGTCTGAGGATATAGTCATTTGGCATTTTGAGAAGTGTGGGAGGTTAAAAGTGGGTACCGGCTTGGCCAAA
GGGCTTTGTCTGCCCATTCTCCATCTTCGTCTTCGAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGTTGGCATGGGGA
GTCATGCATGCATGTGTTTTGGCAATGCAAATATTTTTGTGAATTGTTGATGGGATCGGAGTGGGAGGTCTTGCTGCAGAATATCCAGGCAAACTCTATGCTTAATCTGC
TTAGGGATGTGAAGGATAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGGGGCGGGCCCCTCAGCAGGGCTTGTGGATTGGGCGACGAACTATCTGGCTGTTTTC
CGAGGGGCCTCCCGGACGTATGGCGAGGGTGTTGGAGGGGTGCCTCGAAGTGCAGTAAAATGGATCCCGCCGGAGAAGGGATGGTATAAGGCGAACGTGGATGCTGCATA
CTGTGGGGACCTGTCTCGAGCGGGTGTTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGGAGTTCAGATTTGG
CAGAGGGTCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAGATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGCGGGTTTTTTCGCTGTTGCAAGATCCTG
CGATGGTGGATCTGTCTGAGGTACAGCTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAGCTCGCTTTGCATTGAGAGAGGGAGGCTGCAGGTGGCGGCGGAA
GCGTGTCATGGATTATGTGATTTACTCTAAAGCTAGTGGAGATCGAGTTTTGAAAGCAAACCAGAGAACTATCTAA
mRNA sequenceShow/hide mRNA sequence
AGCCTGATTTGGGGGAGGGAGCTATTGGGAAAGGGTATTCGTTGGAGGGTTGGGAATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATTTCTGTCT
CAGGGTACGGTCCCCGGTTACTTTGGATCCTGGTGCTCGAGTGGCTGATCTTCTTACAGCCTCGGGCCAGTGGAATGAGGAACTCCTGCGACATCATTTTAGCCCTCGTG
AGGTACGCTCTATCCTTACTATCCCACTGCGGCATATTTTGTCTGAGGATATAGTCATTTGGCATTTTGAGAAGTGTGGGAGGTTAAAAGTGGGTACCGGCTTGGCCAAA
GGGCTTTGTCTGCCCATTCTCCATCTTCGTCTTCGAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGTTGGCATGGGGA
GTCATGCATGCATGTGTTTTGGCAATGCAAATATTTTTGTGAATTGTTGATGGGATCGGAGTGGGAGGTCTTGCTGCAGAATATCCAGGCAAACTCTATGCTTAATCTGC
TTAGGGATGTGAAGGATAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGGGGCGGGCCCCTCAGCAGGGCTTGTGGATTGGGCGACGAACTATCTGGCTGTTTTC
CGAGGGGCCTCCCGGACGTATGGCGAGGGTGTTGGAGGGGTGCCTCGAAGTGCAGTAAAATGGATCCCGCCGGAGAAGGGATGGTATAAGGCGAACGTGGATGCTGCATA
CTGTGGGGACCTGTCTCGAGCGGGTGTTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGGAGTTCAGATTTGG
CAGAGGGTCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAGATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGCGGGTTTTTTCGCTGTTGCAAGATCCTG
CGATGGTGGATCTGTCTGAGGTACAGCTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAGCTCGCTTTGCATTGAGAGAGGGAGGCTGCAGGTGGCGGCGGAA
GCGTGTCATGGATTATGTGATTTACTCTAAAGCTAGTGGAGATCGAGTTTTGAAAGCAAACCAGAGAACTATCTAA
Protein sequenceShow/hide protein sequence
SLIWGRELLGKGIRWRVGNGEKVSVYGSNWIPDDFCLRVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPREVRSILTIPLRHILSEDIVIWHFEKCGRLKVGTGLAK
GLCLPILHLRLRVRRCLAGGRGVGRWGSQTKSSWHGESCMHVFWQCKYFCELLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWATNYLAVF
RGASRTYGEGVGGVPRSAVKWIPPEKGWYKANVDAAYCGDLSRAGVGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSSGFFRCCKIL
RWWICLRYSFTRREGNRVAHELARFALREGGCRWRRKRVMDYVIYSKASGDRVLKANQRTI