; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029406 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029406
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
Genome locationchr8:38669332..38670261
RNA-Seq ExpressionLag0029406
SyntenyLag0029406
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141713.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Momordica charantia]3.3e-11581.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RITL NQ+LCKS+NFTNS+A+ SLIF E+L PVV  +SYRPICTEVINVLPPLDETHISNNFISLFSQRKFS DDPELK LAPRLNTQIVETVLNGLR+W
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        K+AHMFFIWASKQ+GYRHNCYT+NAIASILS ARQNAPLR +AMDVLNFRCSMTPGALGVFLR LGSVGLVEEA+FLFDQVR MGLCVPN YSYNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKAN+ DSIE RL EM   G  VDKYTLTPVLKAY N+GKFDKALN        G + G +F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

XP_022964306.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X1 [Cucurbita moschata]1.1e-11581.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

XP_022964314.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X2 [Cucurbita moschata]1.1e-11581.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

XP_022964323.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X3 [Cucurbita moschata]1.1e-11581.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

XP_022990710.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X3 [Cucurbita maxima]7.3e-11580.61Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S +F E+LSPVV SQSYRPIC++ INV+P  DE+HISNNFISLFSQRK S DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IAMDV+N RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVLKAYCN GKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

TrEMBL top hitse value%identityAlignment
A0A6J1CLB5 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial1.6e-11581.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RITL NQ+LCKS+NFTNS+A+ SLIF E+L PVV  +SYRPICTEVINVLPPLDETHISNNFISLFSQRKFS DDPELK LAPRLNTQIVETVLNGLR+W
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        K+AHMFFIWASKQ+GYRHNCYT+NAIASILS ARQNAPLR +AMDVLNFRCSMTPGALGVFLR LGSVGLVEEA+FLFDQVR MGLCVPN YSYNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKAN+ DSIE RL EM   G  VDKYTLTPVLKAY N+GKFDKALN        G + G +F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

A0A6J1HIJ6 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X15.4e-11681.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

A0A6J1HKH1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X35.4e-11681.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

A0A6J1HMT3 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X25.4e-11681.37Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S+IF ENLS VV S+SYRPIC+E INVLP  DE+HISNNFISLFSQ KFS DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IA DVLN RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVL+AYCNAGKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

A0A6J1JSS2 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X23.5e-11580.61Show/hide
Query:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW
        RIT  NQSL KSVNFTNS+A +S +F E+LSPVV SQSYRPIC++ INV+P  DE+HISNNFISLFSQRK S DDPELK LAPRLNTQIVE VLNGLRNW
Subjt:  RITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNW

Query:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI
        KVAHMFFIWASKQHGYRHNCYTFN IASILSHARQNAPLR IAMDV+N RCSMTPGALG+FLR LGSVGLVEEA+FLFDQVRVMGLCVPN Y+YNCLLEI
Subjt:  KVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEI

Query:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF
        LSKANA DSIENRLREM  +G  VDKYTLTPVLKAYCN GKFDKALN        G + G  F
Subjt:  LSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSF

SwissProt top hitse value%identityAlignment
P0C8Q6 Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial1.2e-6451.46Show/hide
Query:  YRPICTEVINV--LPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQN
        +RP+ T++ N   L P +++ ++ N I +F+++ FS DDPEL  L+P LNT++VETVLNG + W +A++FF WASKQ GYR++ Y +NA+ASILS ARQN
Subjt:  YRPICTEVINV--LPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQN

Query:  APLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAA--DSIENRLREMNDFGWGVDKYTLTPVLK
        A L+ + +DVLN RC M+PGA G F+R LG+ GLV+EAS +FD+VR MGLCVPN Y+YNCLLE +SK+N++  + +E RL+EM D G+  DK+TLTPVL+
Subjt:  APLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAA--DSIENRLREMNDFGWGVDKYTLTPVLK

Query:  AYCNAGKFDKALNFIMIFMREGGL-------MGMSFLSW
         YCN GK ++AL+     +  G L       + +SF  W
Subjt:  AYCNAGKFDKALNFIMIFMREGGL-------MGMSFLSW

Q0WPZ6 Pentatricopeptide repeat-containing protein At2g171404.7e-0834.07Show/hide
Query:  GVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFI
        G  L    SVG V+ A  L  ++ +   C+PN Y+ N LL  L K       E  LR+MN+ G+G+D  T   ++   C +G+ DKA+  +
Subjt:  GVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFI

Q9LW84 Pentatricopeptide repeat-containing protein At3g160105.6e-0924.48Show/hide
Query:  ISNNFISLFSQRKFSLD-DPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPL-RVIAMDVLNFRCSMTP
        +   FI +    K+  D +  L+ L  +++ ++V ++L       V   FF WA K+  ++H+C T+  +   L  AR    + R I   V N   S++P
Subjt:  ISNNFISLFSQRKFSLD-DPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPL-RVIAMDVLNFRCSMTP

Query:  GALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREM-NDFGWGVDKYTLTPVLKAYCNAGKFDKAL
          L   ++ LG   +V +A  +F Q +    C P   +YN ++ +L +    + +     EM N+     D  T + ++ +Y   G+ D A+
Subjt:  GALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREM-NDFGWGVDKYTLTPVLKAYCNAGKFDKAL

Q9SKQ4 Pentatricopeptide repeat-containing protein At2g210901.4e-0429.41Show/hide
Query:  RHNCYTFNAIASILS-HARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLR
        +H+C  +N + S L+ H   +  LR++  D++ FR       L V L      GLVEE    F+ + V    VP+   Y CL+++L +A     +  ++ 
Subjt:  RHNCYTFNAIASILS-HARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLR

Query:  EM
        EM
Subjt:  EM

Q9SR00 Pentatricopeptide repeat-containing protein At3g04760, chloroplastic1.4e-0425.85Show/hide
Query:  GYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFR---CSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIE
        G + + +T+N I  I    ++    R   M V N     C     +  + LR L + G  EE   L  ++     C PN  +Y+ L+  L +    +   
Subjt:  GYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFR---CSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIE

Query:  NRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGL
        N L+ M + G   D Y+  P++ A+C  G+ D A+ F+   + +G L
Subjt:  NRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGL

Arabidopsis top hitse value%identityAlignment
AT2G17140.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-0934.07Show/hide
Query:  GVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFI
        G  L    SVG V+ A  L  ++ +   C+PN Y+ N LL  L K       E  LR+MN+ G+G+D  T   ++   C +G+ DKA+  +
Subjt:  GVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFI

AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.0e-0529.41Show/hide
Query:  RHNCYTFNAIASILS-HARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLR
        +H+C  +N + S L+ H   +  LR++  D++ FR       L V L      GLVEE    F+ + V    VP+   Y CL+++L +A     +  ++ 
Subjt:  RHNCYTFNAIASILS-HARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLR

Query:  EM
        EM
Subjt:  EM

AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.0e-0525.85Show/hide
Query:  GYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFR---CSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIE
        G + + +T+N I  I    ++    R   M V N     C     +  + LR L + G  EE   L  ++     C PN  +Y+ L+  L +    +   
Subjt:  GYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFR---CSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIE

Query:  NRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGL
        N L+ M + G   D Y+  P++ A+C  G+ D A+ F+   + +G L
Subjt:  NRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGL

AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.0e-1024.48Show/hide
Query:  ISNNFISLFSQRKFSLD-DPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPL-RVIAMDVLNFRCSMTP
        +   FI +    K+  D +  L+ L  +++ ++V ++L       V   FF WA K+  ++H+C T+  +   L  AR    + R I   V N   S++P
Subjt:  ISNNFISLFSQRKFSLD-DPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPL-RVIAMDVLNFRCSMTP

Query:  GALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREM-NDFGWGVDKYTLTPVLKAYCNAGKFDKAL
          L   ++ LG   +V +A  +F Q +    C P   +YN ++ +L +    + +     EM N+     D  T + ++ +Y   G+ D A+
Subjt:  GALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAADSIENRLREM-NDFGWGVDKYTLTPVLKAYCNAGKFDKAL

AT5G08310.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.7e-6651.46Show/hide
Query:  YRPICTEVINV--LPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQN
        +RP+ T++ N   L P +++ ++ N I +F+++ FS DDPEL  L+P LNT++VETVLNG + W +A++FF WASKQ GYR++ Y +NA+ASILS ARQN
Subjt:  YRPICTEVINV--LPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQN

Query:  APLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAA--DSIENRLREMNDFGWGVDKYTLTPVLK
        A L+ + +DVLN RC M+PGA G F+R LG+ GLV+EAS +FD+VR MGLCVPN Y+YNCLLE +SK+N++  + +E RL+EM D G+  DK+TLTPVL+
Subjt:  APLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKANAA--DSIENRLREMNDFGWGVDKYTLTPVLK

Query:  AYCNAGKFDKALNFIMIFMREGGL-------MGMSFLSW
         YCN GK ++AL+     +  G L       + +SF  W
Subjt:  AYCNAGKFDKALNFIMIFMREGGL-------MGMSFLSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCAGAGGCAAACCTCCCGAGGAAGAAGAAGAATCTCACAGAATCACGCTTGTCAATCAAAGCCTCTGTAAATCCGTCAATTTCACTAATTCCATCGCTGTTGT
TTCGCTCATCTTCAGGGAAAATCTCTCTCCCGTTGTTGCTTCTCAATCTTACAGGCCAATTTGTACAGAAGTGATCAATGTTCTTCCTCCTCTTGACGAAACCCATATCA
GTAATAACTTCATTTCCCTCTTCAGCCAACGAAAATTTTCCCTGGATGACCCCGAGCTCAAATTTTTAGCTCCAAGACTCAACACCCAAATCGTTGAAACTGTATTGAAT
GGCCTAAGGAATTGGAAGGTTGCTCATATGTTCTTCATTTGGGCCTCGAAACAGCATGGTTACAGGCATAACTGCTATACTTTCAATGCCATTGCATCGATCCTATCACA
TGCTCGACAAAATGCCCCACTGAGAGTCATTGCTATGGATGTCCTTAACTTTCGCTGTTCGATGACTCCTGGAGCTTTAGGAGTCTTTTTGAGATATTTGGGGAGCGTGG
GGCTGGTTGAGGAAGCTAGCTTTTTGTTTGATCAGGTCAGAGTAATGGGTCTCTGTGTTCCAAATGGTTATAGTTATAACTGTTTGTTGGAAATTTTGTCCAAGGCAAAT
GCTGCTGATTCCATCGAGAACAGGCTGAGGGAGATGAATGATTTCGGATGGGGAGTTGATAAGTACACGTTGACACCAGTTTTGAAGGCTTACTGCAATGCTGGGAAGTT
TGACAAAGCTTTAAATTTTATAATGATATTCATGAGAGAGGGTGGGTTGATGGGTATGTCTTTTCTATCTTGGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCAGAGGCAAACCTCCCGAGGAAGAAGAAGAATCTCACAGAATCACGCTTGTCAATCAAAGCCTCTGTAAATCCGTCAATTTCACTAATTCCATCGCTGTTGT
TTCGCTCATCTTCAGGGAAAATCTCTCTCCCGTTGTTGCTTCTCAATCTTACAGGCCAATTTGTACAGAAGTGATCAATGTTCTTCCTCCTCTTGACGAAACCCATATCA
GTAATAACTTCATTTCCCTCTTCAGCCAACGAAAATTTTCCCTGGATGACCCCGAGCTCAAATTTTTAGCTCCAAGACTCAACACCCAAATCGTTGAAACTGTATTGAAT
GGCCTAAGGAATTGGAAGGTTGCTCATATGTTCTTCATTTGGGCCTCGAAACAGCATGGTTACAGGCATAACTGCTATACTTTCAATGCCATTGCATCGATCCTATCACA
TGCTCGACAAAATGCCCCACTGAGAGTCATTGCTATGGATGTCCTTAACTTTCGCTGTTCGATGACTCCTGGAGCTTTAGGAGTCTTTTTGAGATATTTGGGGAGCGTGG
GGCTGGTTGAGGAAGCTAGCTTTTTGTTTGATCAGGTCAGAGTAATGGGTCTCTGTGTTCCAAATGGTTATAGTTATAACTGTTTGTTGGAAATTTTGTCCAAGGCAAAT
GCTGCTGATTCCATCGAGAACAGGCTGAGGGAGATGAATGATTTCGGATGGGGAGTTGATAAGTACACGTTGACACCAGTTTTGAAGGCTTACTGCAATGCTGGGAAGTT
TGACAAAGCTTTAAATTTTATAATGATATTCATGAGAGAGGGTGGGTTGATGGGTATGTCTTTTCTATCTTGGCATTAG
Protein sequenceShow/hide protein sequence
MSFRGKPPEEEEESHRITLVNQSLCKSVNFTNSIAVVSLIFRENLSPVVASQSYRPICTEVINVLPPLDETHISNNFISLFSQRKFSLDDPELKFLAPRLNTQIVETVLN
GLRNWKVAHMFFIWASKQHGYRHNCYTFNAIASILSHARQNAPLRVIAMDVLNFRCSMTPGALGVFLRYLGSVGLVEEASFLFDQVRVMGLCVPNGYSYNCLLEILSKAN
AADSIENRLREMNDFGWGVDKYTLTPVLKAYCNAGKFDKALNFIMIFMREGGLMGMSFLSWH